Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2540 Trifolium pratense HOM05D007333 ORTHO05D008874 4.8e-85 317.8 157 100.0
Ca_10485_v3 Cicer arietinum L. HOM05D007333 ORTHO05D008874 8.2e-37 157.5 160 55.6
Medtr1g492600 Medicago truncatula HOM05D007333 ORTHO05D008874 7.2e-33 144.4 167 53.9
Medtr1g492630 Medicago truncatula HOM05D007333 ORTHO05D008874 6.7e-31 137.9 174 51.1
Psat6g175280 Pisum sativum HOM05D007333 ORTHO05D008874 2.9e-26 122.5 143 47.6
Phvul.007G105600 Phaseolus vulgaris HOM05D007333 ORTHO05D008874 5.9e-19 98.2 145 42.8
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 1.7e-18 96.7 160 38.8
Glyma.10G201500 Glycine max HOM05D007333 ORTHO05D008874 1.7e-18 96.7 131 45.0
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 5.0e-18 95.1 160 38.8
VMungo0720G1448 Vigna mungo HOM05D007333 ORTHO05D008874 8.6e-18 94.4 139 43.2
Lalb_Chr21g0313181 Lupinus albus HOM05D007333 ORTHO05D008874 1.1e-17 94.0 158 39.9
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 5.5e-17 91.7 151 39.1
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 8.0e-16 87.8 134 41.8
Glyma.20G188900 Glycine max HOM05D007333 ORTHO05D008874 1.8e-15 86.7 140 41.4
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 6.3e-13 78.2 145 39.3
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 1.4e-12 77.0 147 33.3
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 2.4e-12 76.3 90 44.4
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 7.0e-12 74.7 157 35.0
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 9.2e-12 74.3 83 47.0
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 1.6e-11 73.6 136 36.0
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 2.7e-11 72.8 141 36.9
FAN06G2923 Fragaria x ananassa HOM05D007333 ORTHO05D008874 7.8e-11 71.2 144 38.2
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 1.0e-10 70.9 148 31.8
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 3.8e-10 68.9 135 32.6
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 3.8e-10 68.9 62 56.5
FAN03G1611 Fragaria x ananassa HOM05D007333 ORTHO05D008874 3.8e-10 68.9 144 37.5
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 5.0e-10 68.6 88 40.9
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 5.0e-10 68.6 146 30.8
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 6.6e-10 68.2 92 41.3
FAN01G0324 Fragaria x ananassa HOM05D007333 ORTHO05D008874 8.6e-10 67.8 144 37.5
FAN10G2394 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.1e-09 67.4 144 36.8
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 1.9e-09 66.6 128 31.2
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 1.9e-09 66.6 88 44.3
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 2.5e-09 66.2 136 36.8
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 2.5e-09 66.2 136 36.8
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 2.5e-09 66.2 136 33.1
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 3.3e-09 65.9 67 41.8
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 3.3e-09 65.9 140 32.1
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 3.3e-09 65.9 146 34.9
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 5.6e-09 65.1 118 38.1
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 7.3e-09 64.7 90 35.6
Aa31LG10G7320 Aethionema arabicum HOM05D007333 ORTHO05D008874 9.5e-09 64.3 122 36.9
Duzib128G0626 Durio zibethinus HOM05D007333 ORTHO05D008874 9.5e-09 64.3 66 50.0
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 9.5e-09 64.3 136 36.8
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 1.2e-08 63.9 139 35.3
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 2.1e-08 63.2 134 33.6
Oeu030485.1 Olea europaea HOM05D007333 ORTHO05D008874 4.7e-08 62.0 138 33.3
Sed0000251 Sechium edule HOM05D007333 ORTHO05D008874 4.7e-08 62.0 64 45.3
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 4.7e-08 62.0 129 34.1
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 8.0e-08 61.2 138 29.7
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 1.0e-07 60.8 136 33.8
Sabra10G0181000 Salix brachista HOM05D007333 ORTHO05D008874 1.4e-07 60.5 173 28.3
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 1.8e-07 60.1 122 34.4
Sp5g10030 Schrenkiella parvula HOM05D007333 ORTHO05D008874 1.8e-07 60.1 125 36.8
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 3.0e-07 59.3 136 33.1
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 5.2e-07 58.5 143 34.3
Carub.0005s1859 Capsella rubella HOM05D007333 ORTHO05D008874 5.2e-07 58.5 146 29.5
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 5.2e-07 58.5 107 32.7
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 5.2e-07 58.5 153 29.4
Oeu015044.1 Olea europaea HOM05D007333 ORTHO05D008874 5.2e-07 58.5 139 33.1
BcaC07g39593 Brassica carinata HOM05D007333 ORTHO05D008874 6.8e-07 58.2 143 33.6
A09p45290 Brassica napus HOM05D007333 ORTHO05D008874 6.8e-07 58.2 82 40.2
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 6.8e-07 58.2 153 30.1
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 8.9e-07 57.8 130 33.8
Lsat_1_v5_gn_8_23060 Lactuca sativa HOM05D007333 ORTHO05D008874 8.9e-07 57.8 61 45.9
MBI17_g20230_MAGBIO Magnolia biondii HOM05D007333 ORTHO05D008874 1.2e-06 57.4 75 42.7
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 1.2e-06 57.4 148 31.1
Ah.06g184540 Amaranthus hybridus HOM05D007333 ORTHO05D008874 2.0e-06 56.6 112 33.9
BraA09t39992Z Brassica rapa HOM05D007333 ORTHO05D008874 2.0e-06 56.6 103 37.9
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 2.6e-06 56.2 135 29.6
vmacro10268 Vaccinium macrocarpon HOM05D007333 ORTHO05D008874 2.6e-06 56.2 131 34.4
HanXRQChr14g0456271 Helianthus annuus HOM05D007333 ORTHO05D008874 4.4e-06 55.5 59 44.1
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 4.4e-06 55.5 140 28.6
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 7.5e-06 54.7 114 34.2


User provided reference genes

Program Settings