Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 8.4e-60 233.4 112 100.0
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 8.2e-55 216.9 112 91.1
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 4.6e-50 201.1 112 83.9
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 7.9e-50 200.3 112 86.6
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 1.1e-48 196.4 112 81.2
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 3.4e-45 184.9 113 79.6
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 2.7e-42 175.3 112 71.4
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 6.1e-42 174.1 110 75.5
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 1.0e-41 173.3 114 71.1
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 6.7e-41 170.6 112 70.5
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 1.2e-37 159.8 106 72.6
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 2.2e-36 155.6 106 70.8
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 4.2e-35 151.4 113 64.6
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 3.6e-34 148.3 112 63.4
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 4.7e-34 147.9 112 64.3
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 1.4e-33 146.4 110 65.5
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 6.7e-33 144.1 112 61.6
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 1.1e-32 143.3 112 59.8
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 1.5e-32 142.9 112 58.0
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 1.3e-31 139.8 110 62.7
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 1.7e-31 139.4 110 62.7
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 2.2e-31 139.0 111 58.6
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 2.8e-31 138.7 110 63.6
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 3.7e-31 138.3 108 62.0
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 6.3e-31 137.5 110 60.0
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 3.1e-30 135.2 112 59.8
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 4.1e-30 134.8 104 62.5
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 5.3e-30 134.4 112 58.9
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 6.9e-30 134.0 104 61.5
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 3.4e-29 131.7 110 61.8
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 2.2e-28 129.0 104 55.8
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 2.9e-28 128.6 110 57.3
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 2.9e-28 128.6 113 57.5
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 5.0e-28 127.9 99 58.6
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.4e-27 126.3 110 56.4
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.4e-27 126.3 110 56.4
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 1.4e-27 126.3 110 50.0
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 1.4e-27 126.3 107 59.8
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.9e-27 125.9 110 56.4
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 1.9e-27 125.9 110 59.1
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 4.2e-27 124.8 102 56.9
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 1.2e-26 123.2 106 51.9
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 1.2e-26 123.2 106 51.9
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 2.1e-26 122.5 110 52.7
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 2.1e-26 122.5 108 56.5
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 2.7e-26 122.1 110 52.7
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 2.7e-26 122.1 102 52.0
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 4.7e-26 121.3 108 55.6
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 4.7e-26 121.3 109 57.8
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 8.0e-26 120.6 110 52.7
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 1.4e-25 119.8 113 55.8
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 1.4e-25 119.8 113 55.8
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 3.0e-25 118.6 100 58.0
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 3.9e-25 118.2 112 50.9
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 8.8e-25 117.1 100 57.0
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 1.1e-24 116.7 103 56.3
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 1.5e-24 116.3 94 57.4
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 4.4e-24 114.8 110 50.0
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 5.7e-24 114.4 110 50.0
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 7.4e-24 114.0 110 47.3
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 7.4e-24 114.0 107 48.6
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 9.7e-24 113.6 110 47.3
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 1.7e-23 112.8 111 48.6
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 1.7e-23 112.8 105 52.4
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 1.7e-23 112.8 110 50.9
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 1.7e-23 112.8 110 50.9
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 2.2e-23 112.5 102 56.9
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 5.3e-22 107.8 101 54.5
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 7.0e-22 107.5 108 47.2
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 7.0e-22 107.5 111 54.1
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 9.1e-22 107.1 104 52.9
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 1.2e-21 106.7 114 44.7
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 1.3e-20 103.2 104 53.8
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 1.3e-20 103.2 98 54.1
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 1.3e-20 103.2 90 53.3
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 1.7e-20 102.8 110 44.5
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.2e-20 102.4 111 48.6
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 2.2e-20 102.4 98 55.1
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 8.5e-20 100.5 107 44.9
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 7.2e-19 97.4 104 50.0
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 2.7e-18 95.5 109 46.8
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 1.4e-17 93.2 108 45.4
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 2.3e-17 92.4 76 48.7
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 4.0e-17 91.7 87 48.3
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 5.2e-17 91.3 102 48.0
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 5.2e-17 91.3 66 66.7
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 8.8e-17 90.5 74 59.5
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 2.8e-15 85.5 113 39.8
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 5.3e-14 81.3 106 40.6
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 7.0e-14 80.9 109 38.5
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 9.1e-14 80.5 101 38.6
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 1.2e-13 80.1 112 38.4
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 1.6e-13 79.7 101 39.6
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 2.0e-13 79.3 94 39.4
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 2.7e-13 79.0 101 37.6
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 4.5e-13 78.2 106 39.6
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 5.9e-13 77.8 101 36.6
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 7.7e-13 77.4 101 36.6
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 1.3e-12 76.6 101 37.6
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 5.0e-12 74.7 94 38.3
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 5.0e-12 74.7 94 38.3
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 5.0e-12 74.7 94 38.3


User provided reference genes

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