Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2527 Trifolium pratense HOM05D007530 ORTHO05D009556 4.8e-29 130.6 70 100.0
Ca_07655_v3 Cicer arietinum L. HOM05D007530 ORTHO05D009556 1.1e-17 92.8 69 75.4
Medtr7g068940 Medicago truncatula HOM05D007530 ORTHO05D009556 7.2e-17 90.1 71 73.2
Glyma.16G098900 Glycine max HOM05D007530 ORTHO05D009556 1.2e-16 89.4 72 69.4
Glyma.18G203200 Glycine max HOM05D007530 ORTHO05D009556 4.7e-16 87.4 72 66.7
Psat3g126880 Pisum sativum HOM05D007530 ORTHO05D009556 6.1e-16 87.0 69 71.0
Glyma.07G152100 Glycine max HOM05D007530 ORTHO05D009556 8.0e-16 86.7 72 68.1
Phvul.008G096700 Phaseolus vulgaris HOM05D007530 ORTHO05D009556 6.7e-15 83.6 70 65.7
TAR623G0260 Trochodendron aralioides HOM05D007530 ORTHO05D009556 8.8e-15 83.2 69 66.7
arahy.Tifrunner.gnm1.ann1.88RA0A Arachis hypogaea HOM05D007530 ORTHO05D009556 2.0e-14 82.0 70 65.7
Gohir.A04G092400 Gossypium hirsutum HOM05D007530 ORTHO05D009556 3.3e-14 81.3 62 67.7
Gohir.D04G131700 Gossypium hirsutum HOM05D007530 ORTHO05D009556 3.3e-14 81.3 62 67.7
Gorai.012G115500 Gossypium raimondii HOM05D007530 ORTHO05D009556 3.3e-14 81.3 62 67.7
Manes.08G093800 Manihot esculenta HOM05D007530 ORTHO05D009556 4.4e-14 80.9 71 63.4
Sopen10g034690 Solanum pennellii HOM05D007530 ORTHO05D009556 4.4e-14 80.9 72 59.7
CiPaw.10G157500 Carya illinoinensis HOM05D007530 ORTHO05D009556 9.7e-14 79.7 69 62.3
Manes.09G107300 Manihot esculenta HOM05D007530 ORTHO05D009556 9.7e-14 79.7 71 62.0
Solyc10g085215.1 Solanum lycopersicum HOM05D007530 ORTHO05D009556 9.7e-14 79.7 72 58.3
Hma1.2p1_0362F.1_g136440 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 1.7e-13 79.0 62 66.1
Lalb_Chr01g0023151 Lupinus albus HOM05D007530 ORTHO05D009556 1.7e-13 79.0 70 62.9
Nitab4.5_0000770g0040 Nicotiana tabacum HOM05D007530 ORTHO05D009556 1.7e-13 79.0 56 71.4
Lalb_Chr19g0124461 Lupinus albus HOM05D007530 ORTHO05D009556 2.2e-13 78.6 62 66.1
Nitab4.5_0003514g0010 Nicotiana tabacum HOM05D007530 ORTHO05D009556 2.2e-13 78.6 72 56.9
Potri.006G101901 Populus trichocarpa HOM05D007530 ORTHO05D009556 2.2e-13 78.6 71 62.0
GSVIVG01011181001 Vitis vinifera HOM05D007530 ORTHO05D009556 2.2e-13 78.6 72 62.5
arahy.Tifrunner.gnm1.ann1.ZMF41F Arachis hypogaea HOM05D007530 ORTHO05D009556 3.7e-13 77.8 70 62.9
Nitab4.5_0000444g0050 Nicotiana tabacum HOM05D007530 ORTHO05D009556 3.7e-13 77.8 72 56.9
arahy.Tifrunner.gnm1.ann1.R0LR40 Arachis hypogaea HOM05D007530 ORTHO05D009556 4.8e-13 77.4 59 69.5
Sed0024664 Sechium edule HOM05D007530 ORTHO05D009556 4.8e-13 77.4 69 63.8
THA.LOC109117252 Tarenaya hassleriana HOM05D007530 ORTHO05D009556 4.8e-13 77.4 58 65.5
CSS0025168 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 6.3e-13 77.0 59 69.5
Sp6g40660 Schrenkiella parvula HOM05D007530 ORTHO05D009556 6.3e-13 77.0 70 57.1
PGSC0003DMG400011024 Solanum tuberosum HOM05D007530 ORTHO05D009556 6.3e-13 77.0 72 56.9
AL6G10780 Arabidopsis lyrata HOM05D007530 ORTHO05D009556 8.2e-13 76.6 61 62.3
BcaB01g06225 Brassica carinata HOM05D007530 ORTHO05D009556 1.1e-12 76.3 70 57.1
A03p00350 Brassica napus HOM05D000406 ORTHO05D006918 1.1e-12 76.3 62 59.7
C03p00510 Brassica napus HOM05D000406 ORTHO05D006918 1.1e-12 76.3 62 59.7
BolC3t12617H Brassica oleracea HOM05D000406 ORTHO05D006918 1.1e-12 76.3 62 59.7
BraA03t09426Z Brassica rapa HOM05D000406 ORTHO05D006918 1.1e-12 76.3 62 59.7
Potri.016G118800 Populus trichocarpa HOM05D007530 ORTHO05D009556 1.1e-12 76.3 71 60.6
Migut.L02025 Erythranthe guttata HOM05D007530 ORTHO05D009556 1.4e-12 75.9 72 56.9
Nitab4.5_0004107g0030 Nicotiana tabacum HOM05D007530 ORTHO05D009556 1.4e-12 75.9 54 70.4
ATR0681G213 Amborella trichopoda HOM05D007530 ORTHO05D009556 1.8e-12 75.5 68 64.7
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 1.8e-12 75.5 59 67.8
MBI15_g24380_MAGBIO Magnolia biondii HOM05D007530 ORTHO05D009556 1.8e-12 75.5 59 66.1
Nn2g13162 Nelumbo nucifera HOM05D007530 ORTHO05D009556 1.8e-12 75.5 69 63.8
Rhsim05G0217200 Rhododendron simsii HOM05D000043 ORTHO05D005398 2.4e-12 75.1 64 65.6
Thecc.05G013400 Theobroma cacao HOM05D007530 ORTHO05D009556 2.4e-12 75.1 59 67.8
CANSAT35G1517 Cannabis sativa HOM05D007530 ORTHO05D009556 3.1e-12 74.7 59 64.4
CARHR211730 Cardamine hirsuta HOM05D007530 ORTHO05D009556 4.1e-12 74.3 61 62.3
Thhalv10015199m.g Eutrema salsugineum HOM05D007530 ORTHO05D009556 4.1e-12 74.3 72 59.7
PSO384G0267 Papaver somniferum HOM05D007530 ORTHO05D009556 5.3e-12 73.9 67 58.2
Aa31LG5G18900 Aethionema arabicum HOM05D007530 ORTHO05D009556 7.0e-12 73.6 69 56.5
AT5G01350 Arabidopsis thaliana HOM05D007530 ORTHO05D009556 7.0e-12 73.6 61 60.7
CsaV3_3G033590 Cucumis sativus L. HOM05D007530 ORTHO05D009556 7.0e-12 73.6 68 61.8
ClCG10G022290 Citrullus lanatus HOM05D007530 ORTHO05D009556 9.1e-12 73.2 59 64.4
PGSC0003DMG400019174 Solanum tuberosum HOM05D007530 ORTHO05D009556 9.1e-12 73.2 72 55.6
Carub.0006s0047 Capsella rubella HOM05D007530 ORTHO05D009556 1.2e-11 72.8 72 54.2
Sc01g0006890 Simmondsia chinensis HOM05D007530 ORTHO05D009556 1.2e-11 72.8 69 59.4
MELO3C009149.2 Cucumis melo HOM05D007530 ORTHO05D009556 1.6e-11 72.4 68 60.3
Duzib106G1059 Durio zibethinus HOM05D007530 ORTHO05D009556 1.6e-11 72.4 68 64.7
COL.COLO4_14508 Corchorus olitorius HOM05D002620 ORTHO05D006469 2.0e-11 72.0 62 58.1
Prupe.6G279800 Prunus persica HOM05D007530 ORTHO05D009556 2.0e-11 72.0 72 56.9
HPP92_021352 Vanilla planifolia HOM05D007530 ORTHO05D009556 2.0e-11 72.0 64 59.4
PGR142G0763 Punica granatum HOM05D007530 ORTHO05D009556 2.6e-11 71.6 59 61.0
SalBow4G2966 Salvia bowleyana HOM05D007530 ORTHO05D009556 2.6e-11 71.6 71 54.9
ECA247G1901 Erigeron canadensis HOM05D007530 ORTHO05D009556 4.5e-11 70.9 59 61.0
Sabra06G0078200 Salix brachista HOM05D007530 ORTHO05D009556 4.5e-11 70.9 59 61.0
HPP92_021347 Vanilla planifolia HOM05D007530 ORTHO05D009556 4.5e-11 70.9 56 60.7
FAN02G2108 Fragaria x ananassa HOM05D007530 ORTHO05D009556 7.7e-11 70.1 70 52.9
unitig_37.g12653 Utricularia gibba HOM05D007530 ORTHO05D009556 7.7e-11 70.1 72 52.8
Duzib093G1475 Durio zibethinus HOM05D007530 ORTHO05D009556 1.3e-10 69.3 68 60.3
Os04g0508100 Oryza sativa ssp. japonica HOM05D007530 ORTHO05D009556 1.7e-10 68.9 57 57.9
Hund10987 Selenicereus undatus HOM05D007530 ORTHO05D009556 1.7e-10 68.9 70 55.7
Aa31LG1G23010 Aethionema arabicum HOM05D007530 ORTHO05D009556 2.2e-10 68.6 68 55.9
FvH4_6g11210 Fragaria vesca HOM05D007530 ORTHO05D009556 2.2e-10 68.6 69 52.2
FAN09G3168 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.2e-10 68.6 69 52.2
FAN14G2496 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.2e-10 68.6 69 52.2
FAN14G3881 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.2e-10 68.6 69 52.2
Cc06_g01140 Coffea canephora HOM05D007530 ORTHO05D009556 2.9e-10 68.2 47 70.2
EL10Ac5g12543 Beta vulgaris HOM05D007530 ORTHO05D009556 3.8e-10 67.8 71 52.1
RcHm_v2.0_Chr3g0462691 Rosa chinensis HOM05D007530 ORTHO05D009556 5.0e-10 67.4 64 51.6
TWI74G1090 Tripterygium wilfordii HOM05D007530 ORTHO05D009556 5.0e-10 67.4 65 53.8
HanXRQChr10g0294071 Helianthus annuus HOM05D007530 ORTHO05D009556 8.5e-10 66.6 59 57.6
FAN05G2692 Fragaria x ananassa HOM05D007530 ORTHO05D009556 1.5e-09 65.9 62 51.6
Mapoly0015s0144 Marchantia polymorpha HOM05D007530 ORTHO05D009556 4.2e-09 64.3 70 51.4
MD12G1171600 Malus domestica HOM05D007530 ORTHO05D009556 9.4e-09 63.2 74 51.4
Eucgr.G03069 Eucalyptus grandis HOM05D007530 ORTHO05D009556 1.2e-08 62.8 43 69.8
Zm00001eb426270 Zea mays HOM05D007530 ORTHO05D009556 2.7e-08 61.6 64 48.4
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 1.0e-07 59.7 81 45.7
Aqoxy2G00850 Aquilegia oxysepala HOM05D007530 ORTHO05D009556 1.8e-07 58.9 54 55.6
Pp3c21_22550 Physcomitrium patens HOM05D007530 ORTHO05D009556 3.0e-07 58.2 60 51.7
Lsat_1_v5_gn_9_35161 Lactuca sativa HOM05D007530 ORTHO05D009556 1.2e-06 56.2 42 64.3
AagrBONN_evm.TU.Sc2ySwM_117.3278 Anthoceros agrestis HOM05D007530 ORTHO05D009556 2.6e-06 55.1 64 46.9
vmacro20294 Vaccinium macrocarpon HOM05D007530 ORTHO05D009556 7.5e-06 53.5 46 65.2


User provided reference genes

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