Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G25215 Trifolium pratense HOM05D000403 ORTHO05D010388 5.3e-43 177.2 83 100.0
TPR.G22335 Trifolium pratense HOM05D000403 ORTHO05D010388 7.7e-18 93.6 54 79.6
TPR.G17341 Trifolium pratense HOM05D000403 ORTHO05D000350 2.2e-17 92.0 43 97.7
TPR.G40024 Trifolium pratense HOM05D000403 ORTHO05D010388 1.9e-16 89.0 46 91.3
Medtr8g009980 Medicago truncatula HOM05D000403 ORTHO05D000350 4.7e-15 84.3 44 90.9
Ca_23153_v3 Cicer arietinum L. HOM05D000403 ORTHO05D000350 6.8e-14 80.5 43 88.4
Lj3g0001528 Lotus japonicus HOM05D000403 ORTHO05D000350 1.5e-13 79.3 43 81.4
Lj3g0022180 Lotus japonicus HOM05D000403 ORTHO05D000350 2.2e-12 75.5 43 74.4
Phvul.010G038200 Phaseolus vulgaris HOM05D000403 ORTHO05D000350 1.1e-11 73.2 43 74.4
Glyma.03G097600 Glycine max HOM05D000403 ORTHO05D000350 3.1e-11 71.6 43 72.1
VMungo0331G2006 Vigna mungo HOM05D000403 ORTHO05D000350 4.1e-11 71.2 43 72.1
Psat0s2549g0200 Pisum sativum HOM05D000403 ORTHO05D000350 5.4e-11 70.9 48 68.8
Psat1g060560 Pisum sativum HOM05D000403 ORTHO05D000350 2.7e-10 68.6 36 83.3
Lj3g0026601 Lotus japonicus HOM05D000403 ORTHO05D000350 5.9e-10 67.4 43 69.8
TPR.G17366 Trifolium pratense HOM05D000403 ORTHO05D000350 1.0e-09 66.6 48 64.6
Medtr8g010000 Medicago truncatula HOM05D000403 ORTHO05D000350 7.2e-08 60.5 48 56.2
Medtr8g010030 Medicago truncatula HOM05D000403 ORTHO05D000350 1.6e-07 59.3 43 65.1
arahy.Tifrunner.gnm1.ann1.42YDET Arachis hypogaea HOM05D000403 ORTHO05D000350 2.7e-07 58.5 45 64.4
arahy.Tifrunner.gnm1.ann1.4Z5CAK Arachis hypogaea HOM05D000403 ORTHO05D000350 2.7e-07 58.5 45 64.4
Ca_23154_v3 Cicer arietinum L. HOM05D000403 ORTHO05D000350 2.7e-07 58.5 43 65.1
Lalb_Chr12g0210201 Lupinus albus HOM05D000403 ORTHO05D000350 2.7e-07 58.5 43 62.8
MBI13_g44775_MAGBIO Magnolia biondii HOM05D000403 ORTHO05D000350 3.6e-07 58.2 43 60.5
MBI13_g45436_MAGBIO Magnolia biondii HOM05D000403 ORTHO05D000350 3.6e-07 58.2 43 60.5
Glyma.03G098600 Glycine max HOM05D000403 ORTHO05D000350 1.4e-06 56.2 43 60.5
BcaB01g04963 Brassica carinata HOM05D000403 ORTHO05D000350 2.3e-06 55.5 48 50.0
C09p60150 Brassica napus HOM05D000403 ORTHO05D000350 2.3e-06 55.5 48 52.1
Dinv11976 Davidia involucrata HOM05D000403 ORTHO05D000350 2.3e-06 55.5 43 60.5
BraA10t44290Z Brassica rapa HOM05D000403 ORTHO05D000350 4.0e-06 54.7 48 50.0
BcaB01g05234 Brassica carinata HOM05D000403 ORTHO05D000350 5.2e-06 54.3 48 50.0
C03p09370 Brassica napus HOM05D000403 ORTHO05D000350 5.2e-06 54.3 48 50.0
Lalb_Chr12g0210151 Lupinus albus HOM05D000403 ORTHO05D000350 5.2e-06 54.3 43 58.1
Lalb_Chr12g0210251 Lupinus albus HOM05D000403 ORTHO05D000350 5.2e-06 54.3 43 58.1
Manes.11G136700 Manihot esculenta HOM05D000403 ORTHO05D000350 6.8e-06 53.9 67 41.8
TAR636G2242 Trochodendron aralioides HOM05D000403 ORTHO05D000350 6.8e-06 53.9 43 58.1
A02p03890 Brassica napus HOM05D000403 ORTHO05D000350 8.8e-06 53.5 45 57.8
A10p22310 Brassica napus HOM05D000403 ORTHO05D000350 8.8e-06 53.5 48 52.1
BraA02t05353Z Brassica rapa HOM05D000403 ORTHO05D000350 8.8e-06 53.5 45 57.8
Phvul.010G039300 Phaseolus vulgaris HOM05D000403 ORTHO05D000350 8.8e-06 53.5 48 52.1


User provided reference genes

Program Settings