Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G25138 Trifolium pratense HOM05D003716 ORTHO05D010944 3.5e-32 141.0 68 100.0
TPR.G25096 Trifolium pratense HOM05D003716 ORTHO05D010944 5.7e-19 97.1 51 90.2
TPR.G25120 Trifolium pratense HOM05D003716 ORTHO05D010944 5.7e-19 97.1 51 92.2
TPR.G39422 Trifolium pratense HOM05D003716 ORTHO05D010944 5.7e-19 97.1 51 92.2
TPR.G25129 Trifolium pratense HOM05D003716 ORTHO05D010944 1.7e-18 95.5 48 95.8
TPR.G40781 Trifolium pratense HOM05D003716 ORTHO05D010944 2.2e-18 95.1 45 97.8
TPR.G25099 Trifolium pratense HOM05D003716 ORTHO05D010944 6.3e-18 93.6 51 88.2
Medtr3g031730 Medicago truncatula HOM05D003716 ORTHO05D010944 1.8e-17 92.0 43 100.0
TPR.G12945 Trifolium pratense HOM05D003716 ORTHO05D010944 3.1e-17 91.3 47 93.6
TPR.G19263 Trifolium pratense HOM05D003716 ORTHO05D010944 4.1e-17 90.9 49 91.8
TPR.G12906 Trifolium pratense HOM05D003716 ORTHO05D010944 3.5e-16 87.8 45 88.9
TPR.G25105 Trifolium pratense HOM05D003716 ORTHO05D010944 2.2e-15 85.1 51 80.4
Medtr3g029970 Medicago truncatula HOM05D003716 ORTHO05D010944 3.8e-15 84.3 48 85.4
TPR.G6455 Trifolium pratense HOM05D003716 ORTHO05D010944 3.8e-15 84.3 43 93.0
CiPaw.07G008500 Carya illinoinensis HOM05D003716 ORTHO05D010944 2.1e-13 78.6 43 86.0
SGA_v2.0_scaffold44G16590 Striga asiatica HOM05D003716 ORTHO05D010944 4.7e-13 77.4 43 86.0
CiPaw.07G008700 Carya illinoinensis HOM05D003716 ORTHO05D010944 3.0e-12 74.7 43 83.7
Glyma.03G244100 Glycine max HOM05D003716 ORTHO05D010944 1.2e-11 72.8 55 70.9
arahy.Tifrunner.gnm1.ann1.02S1KF Arachis hypogaea HOM05D003716 ORTHO05D010944 1.5e-11 72.4 42 78.6
Migut.H02105 Erythranthe guttata HOM05D003716 ORTHO05D010944 1.5e-11 72.4 41 80.5
Gorai.011G075800 Gossypium raimondii HOM05D003716 ORTHO05D010944 2.6e-11 71.6 58 67.2
Gorai.011G076400 Gossypium raimondii HOM05D003716 ORTHO05D010944 2.6e-11 71.6 58 67.2
DCAR_007480 Daucus carota HOM05D003716 ORTHO05D010944 1.7e-10 68.9 50 68.0
Gohir.1Z049367 Gossypium hirsutum HOM05D003716 ORTHO05D010944 2.2e-10 68.6 58 65.5
Gohir.D10G071280 Gossypium hirsutum HOM05D003716 ORTHO05D010944 2.2e-10 68.6 58 65.5
Gorai.011G076100 Gossypium raimondii HOM05D003716 ORTHO05D010944 2.2e-10 68.6 43 76.7
Nn4g24428 Nelumbo nucifera HOM05D003716 ORTHO05D010944 2.8e-10 68.2 43 74.4
Prupe.6G338300 Prunus persica HOM05D003716 ORTHO05D010944 3.7e-10 67.8 42 81.0
Migut.B00145 Erythranthe guttata HOM05D003716 ORTHO05D010944 4.1e-09 64.3 43 69.8
GSVIVG01010369001 Vitis vinifera HOM05D003716 ORTHO05D010944 5.4e-09 63.9 57 57.9
Nn6g34121 Nelumbo nucifera HOM05D003716 ORTHO05D010944 1.6e-08 62.4 41 70.7
Carub.0003s3151 Capsella rubella HOM05D003716 ORTHO05D010944 2.3e-07 58.5 44 65.9
Carub.0008s0554 Capsella rubella HOM05D003716 ORTHO05D010944 3.8e-07 57.8 44 65.9
Gohir.D10G071328 Gossypium hirsutum HOM05D003716 ORTHO05D006233 8.6e-07 56.6 63 46.0
Gohir.D10G071368 Gossypium hirsutum HOM05D003716 ORTHO05D006233 8.6e-07 56.6 63 46.0
Gohir.D10G071414 Gossypium hirsutum HOM05D003716 ORTHO05D006233 8.6e-07 56.6 63 46.0
Gohir.D10G071442 Gossypium hirsutum HOM05D003716 ORTHO05D006233 8.6e-07 56.6 63 46.0
Gorai.011G076700 Gossypium raimondii HOM05D003716 ORTHO05D006233 8.6e-07 56.6 63 46.0
Gohir.D10G071296 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.1e-06 56.2 48 56.2
Gohir.D10G071304 Gossypium hirsutum HOM05D003716 ORTHO05D006233 1.1e-06 56.2 48 56.2
GSVIVG01010371001 Vitis vinifera HOM05D000126 ORTHO05D000085 2.5e-06 55.1 43 60.5
FvH4_4g03031 Fragaria vesca HOM05D003716 ORTHO05D010944 5.5e-06 53.9 43 62.8
Sabra05G0169200 Salix brachista HOM05D000809 ORTHO05D007735 5.5e-06 53.9 41 65.9
Carub.0008s0894 Capsella rubella HOM05D003716 ORTHO05D010944 7.2e-06 53.5 43 67.4


User provided reference genes

Program Settings