Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24998 Trifolium pratense HOM05D001944 ORTHO05D011318 4.1e-176 621.3 319 100.0
TPR.G9836 Trifolium pratense HOM05D001944 ORTHO05D011318 1.6e-79 300.4 332 61.1
TPR.G6160 Trifolium pratense HOM05D001944 ORTHO05D011318 7.0e-35 152.1 336 39.6
Medtr4g058650 Medicago truncatula HOM05D001944 ORTHO05D011318 1.0e-33 148.3 299 40.5
Psat7g192240 Pisum sativum HOM05D001944 ORTHO05D011318 1.9e-32 144.1 299 40.1
Lalb_Chr19g0137131 Lupinus albus HOM05D001944 ORTHO05D011318 1.4e-22 111.3 271 39.9
Glyma.12G077400 Glycine max HOM05D001944 ORTHO05D011318 2.4e-19 100.5 185 47.6
Glyma.11G196900 Glycine max HOM05D001944 ORTHO05D011318 4.1e-19 99.8 185 47.6
Phvul.011G081700 Phaseolus vulgaris HOM05D001944 ORTHO05D011318 3.5e-18 96.7 177 47.5
Lalb_Chr01g0004401 Lupinus albus HOM05D001944 ORTHO05D011318 5.6e-16 89.4 204 41.7
Lj3g0022042 Lotus japonicus HOM05D001944 ORTHO05D011318 3.6e-15 86.7 370 31.4
arahy.Tifrunner.gnm1.ann1.H0XM2A Arachis hypogaea HOM05D001944 ORTHO05D011318 1.8e-14 84.3 171 41.5
TAR633G2605 Trochodendron aralioides HOM05D001944 ORTHO05D002405 2.3e-14 84.0 60 70.0
Manes.03G122401 Manihot esculenta HOM05D001944 ORTHO05D002405 2.6e-13 80.5 66 62.1
Psat5g279720 Pisum sativum HOM05D001944 ORTHO05D002405 3.4e-13 80.1 95 49.5
TAR636G3431 Trochodendron aralioides HOM05D001944 ORTHO05D002405 4.4e-13 79.7 60 66.7
TPR.G11481 Trifolium pratense HOM05D001944 ORTHO05D002405 7.6e-13 79.0 114 44.7
Ca_01379_v3 Cicer arietinum L. HOM05D001944 ORTHO05D002405 1.3e-12 78.2 98 50.0
Ca_01395_v3 Cicer arietinum L. HOM05D001944 ORTHO05D002405 1.3e-12 78.2 98 50.0
Nn2g11517 Nelumbo nucifera HOM05D001944 ORTHO05D002405 3.7e-12 76.6 60 61.7
TAR623G0602 Trochodendron aralioides HOM05D001944 ORTHO05D002405 6.4e-12 75.9 60 61.7
Aqoxy1G01204 Aquilegia oxysepala HOM05D001944 ORTHO05D002405 1.1e-11 75.1 100 50.0
Phvul.005G133500 Phaseolus vulgaris HOM05D001944 ORTHO05D002405 1.1e-11 75.1 116 42.2
arahy.Tifrunner.gnm1.ann1.ST0ZZW Arachis hypogaea HOM05D001944 ORTHO05D011318 1.9e-11 74.3 289 29.8
Ca_19291_v3 Cicer arietinum L. HOM05D001944 ORTHO05D023720 4.1e-11 73.2 243 36.2
Lalb_Chr24g0394751 Lupinus albus HOM05D001944 ORTHO05D002405 7.1e-11 72.4 122 43.4
Medtr2g094980 Medicago truncatula HOM05D001944 ORTHO05D011318 7.1e-11 72.4 67 55.2
Nn2g13727 Nelumbo nucifera HOM05D001944 ORTHO05D002405 7.1e-11 72.4 60 60.0
Lj3g0013525 Lotus japonicus HOM05D001944 ORTHO05D002405 9.2e-11 72.0 105 47.6
Glyma.13G324500 Glycine max HOM05D001944 ORTHO05D002405 1.2e-10 71.6 105 43.8
Haze_23780 Corylus avellana HOM05D001944 ORTHO05D002405 1.6e-10 71.2 93 46.2
Gohir.D05G104800 Gossypium hirsutum HOM05D001944 ORTHO05D002405 1.6e-10 71.2 60 58.3
Gorai.009G108800 Gossypium raimondii HOM05D001944 ORTHO05D002405 1.6e-10 71.2 60 58.3
COL.COLO4_18304 Corchorus olitorius HOM05D001944 ORTHO05D002405 2.1e-10 70.9 62 58.1
Dinv01067 Davidia involucrata HOM05D001944 ORTHO05D002405 2.1e-10 70.9 60 60.0
TWI79G1706 Tripterygium wilfordii HOM05D001944 ORTHO05D002405 2.7e-10 70.5 57 59.6
Ciclev10027663m.g Citrus clementina HOM05D001944 ORTHO05D002405 3.5e-10 70.1 98 46.9
Sabra05G0007500 Salix brachista HOM05D001944 ORTHO05D002405 3.5e-10 70.1 66 59.1
Sp1g06700 Schrenkiella parvula HOM05D001944 ORTHO05D002405 3.5e-10 70.1 57 61.4
C08p50200 Brassica napus HOM05D001944 ORTHO05D002405 4.6e-10 69.7 60 56.7
BolC8t52549H Brassica oleracea HOM05D001944 ORTHO05D002405 4.6e-10 69.7 60 56.7
TWI31G0996 Tripterygium wilfordii HOM05D001944 ORTHO05D002405 7.8e-10 68.9 92 46.7
TAR369G0775 Trochodendron aralioides HOM05D001944 ORTHO05D002405 1.0e-09 68.6 101 44.6
Dinv32718 Davidia involucrata HOM05D001944 ORTHO05D002405 1.3e-09 68.2 57 59.6
GSVIVG01025216001 Vitis vinifera HOM05D001944 ORTHO05D002405 1.3e-09 68.2 146 37.0
Glyma.12G175400 Glycine max HOM05D001944 ORTHO05D002405 1.7e-09 67.8 105 41.9
PGR102G2473 Punica granatum HOM05D001944 ORTHO05D002405 1.7e-09 67.8 60 60.0
Gohir.A05G105000 Gossypium hirsutum HOM05D001944 ORTHO05D002405 2.3e-09 67.4 91 47.3
Potri.013G006000 Populus trichocarpa HOM05D001944 ORTHO05D002405 2.3e-09 67.4 100 45.0
Actinidia07154 Actinidia chinensis HOM05D001944 ORTHO05D002405 3.0e-09 67.0 73 49.3
Medtr2g095030 Medicago truncatula HOM05D001944 ORTHO05D002405 3.0e-09 67.0 116 38.8
Solyc06g010240.3 Solanum lycopersicum HOM05D001944 ORTHO05D002405 3.0e-09 67.0 59 59.3
Sopen06g005090 Solanum pennellii HOM05D001944 ORTHO05D002405 3.0e-09 67.0 59 59.3
Cfa011296 Carpinus fangiana HOM05D001944 ORTHO05D002405 3.9e-09 66.6 146 37.7
Aqoxy7G00183 Aquilegia oxysepala HOM05D001944 ORTHO05D002405 6.6e-09 65.9 96 44.8
Gohir.A08G199401 Gossypium hirsutum HOM05D001944 ORTHO05D002405 8.6e-09 65.5 57 56.1
Gorai.004G230500 Gossypium raimondii HOM05D001944 ORTHO05D002405 8.6e-09 65.5 57 56.1
Actinidia24118 Actinidia chinensis HOM05D001944 ORTHO05D002405 1.1e-08 65.1 60 53.3
ATR0048G049 Amborella trichopoda HOM05D001944 ORTHO05D002405 1.1e-08 65.1 70 50.0
Potri.004G212700 Populus trichocarpa HOM05D001944 ORTHO05D002405 1.5e-08 64.7 57 57.9
BcaC07g42507 Brassica carinata HOM05D001944 ORTHO05D002405 1.9e-08 64.3 164 33.5
MD03G1121600 Malus domestica HOM05D001944 ORTHO05D002405 1.9e-08 64.3 57 61.4
BraA09t41943Z Brassica rapa HOM05D001944 ORTHO05D002405 2.5e-08 63.9 162 33.3
CSS0012038 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D002405 2.5e-08 63.9 57 56.1
THA.LOC104800593 Tarenaya hassleriana HOM05D001944 ORTHO05D002405 2.5e-08 63.9 57 52.6
Thecc.09G343900 Theobroma cacao HOM05D001944 ORTHO05D002405 2.5e-08 63.9 60 53.3
Duzib168G0647 Durio zibethinus HOM05D001944 ORTHO05D002405 3.3e-08 63.5 151 33.1
Nitab4.5_0000181g0180 Nicotiana tabacum HOM05D001944 ORTHO05D002405 3.3e-08 63.5 63 55.6
Prupe.6G104600 Prunus persica HOM05D001944 ORTHO05D002405 3.3e-08 63.5 60 56.7
CAN.G171.6 Capsicum annuum HOM05D001944 ORTHO05D002405 4.3e-08 63.2 59 55.9
Atru.chr8.1406 Acer truncatum HOM05D001944 ORTHO05D002405 7.3e-08 62.4 57 56.1
CiPaw.14G085200 Carya illinoinensis HOM05D001944 ORTHO05D002405 7.3e-08 62.4 57 57.9
AT1G08060 Arabidopsis thaliana HOM05D001944 ORTHO05D002405 9.6e-08 62.0 57 56.1
Rhsim01G0215200 Rhododendron simsii HOM05D001944 ORTHO05D014293 9.6e-08 62.0 104 38.5
Thhalv10006530m.g Eutrema salsugineum HOM05D001944 ORTHO05D002405 1.2e-07 61.6 57 56.1
VMungo1127G1376 Vigna mungo HOM05D001944 ORTHO05D011318 1.2e-07 61.6 104 41.3
A09p66040 Brassica napus HOM05D001944 ORTHO05D002405 1.6e-07 61.2 162 32.7
Rhsim13G0096400 Rhododendron simsii HOM05D001944 ORTHO05D002405 1.6e-07 61.2 60 55.0
Gohir.D08G216700 Gossypium hirsutum HOM05D001944 ORTHO05D002405 2.1e-07 60.8 95 43.2
PSO063G0478 Papaver somniferum HOM05D001944 ORTHO05D002405 2.1e-07 60.8 170 33.5
Peaxi162Scf00167g00092 Petunia axillaris HOM05D001944 ORTHO05D002405 2.1e-07 60.8 58 53.4
QL01p026770 Quercus lobata HOM05D001944 ORTHO05D002405 2.1e-07 60.8 88 43.2
RcHm_v2.0_Chr4g0405411 Rosa chinensis HOM05D001944 ORTHO05D020674 2.8e-07 60.5 58 51.7
PSO339G1466 Papaver somniferum HOM05D001944 ORTHO05D002405 4.7e-07 59.7 170 33.5
vmacro03215 Vaccinium macrocarpon HOM05D001944 ORTHO05D002405 4.7e-07 59.7 57 56.1
MD11G1139900 Malus domestica HOM05D001944 ORTHO05D002405 6.2e-07 59.3 57 56.1
Actinidia20443 Actinidia chinensis HOM05D001944 ORTHO05D014293 8.1e-07 58.9 56 57.1
Hma1.2p1_0058F.1_g032350 Hydrangea macrophylla HOM05D001944 ORTHO05D011318 8.1e-07 58.9 59 54.2
MD11G1140000 Malus domestica HOM05D001944 ORTHO05D002405 8.1e-07 58.9 194 28.4
Sc21g0003900 Simmondsia chinensis HOM05D001944 ORTHO05D002405 1.1e-06 58.5 148 34.5
Carub.0001s0741 Capsella rubella HOM05D001944 ORTHO05D002405 1.4e-06 58.2 57 56.1
Peaxi162Scf00948g00114 Petunia axillaris HOM05D001944 ORTHO05D002405 1.4e-06 58.2 58 53.4
Sopen11g028320 Solanum pennellii HOM05D001944 ORTHO05D002405 2.4e-06 57.4 59 49.2
Nitab4.5_0000602g0020 Nicotiana tabacum HOM05D001944 ORTHO05D002405 5.2e-06 56.2 59 49.2
AL1G18410 Arabidopsis lyrata HOM05D001944 ORTHO05D002405 6.8e-06 55.8 57 54.4
CAN.G631.45 Capsicum annuum HOM05D000550 ORTHO05D009781 6.8e-06 55.8 58 48.3
Cc01_g10870 Coffea canephora HOM05D001944 ORTHO05D002405 6.8e-06 55.8 99 38.4
CARHR007860 Cardamine hirsuta HOM05D001944 ORTHO05D002405 8.9e-06 55.5 63 49.2
FvH4_4g08540 Fragaria vesca HOM05D001944 ORTHO05D020674 8.9e-06 55.5 56 53.6
FAN12G2222 Fragaria x ananassa HOM05D001944 ORTHO05D020674 8.9e-06 55.5 56 53.6
Solyc11g069610.3 Solanum lycopersicum HOM05D001944 ORTHO05D002405 8.9e-06 55.5 59 49.2


User provided reference genes

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