Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2499 Trifolium pratense HOM05D007506 ORTHO05D008409 1.4e-42 176.0 101 100.0
VMungo0720G0153 Vigna mungo HOM05D007506 ORTHO05D008409 1.3e-19 99.8 71 77.5
Glyma.10G277900 Glycine max HOM05D007506 ORTHO05D008409 2.2e-19 99.0 73 75.3
Medtr1g111840 Medicago truncatula HOM05D007506 ORTHO05D008409 1.1e-18 96.7 73 78.1
Lj5g0016646 Lotus japonicus HOM05D007506 ORTHO05D008409 2.5e-18 95.5 73 75.3
Phvul.007G023500 Phaseolus vulgaris HOM05D007506 ORTHO05D008409 2.7e-17 92.0 71 73.2
Ca_25653_v3 Cicer arietinum L. HOM05D007506 ORTHO05D008409 1.5e-15 86.3 73 69.9
Psat6g238400 Pisum sativum HOM05D007506 ORTHO05D008409 1.5e-15 86.3 73 71.2
Glyma.20G110900 Glycine max HOM05D007506 ORTHO05D008409 5.7e-15 84.3 64 71.9
arahy.Tifrunner.gnm1.ann1.DEP6R1 Arachis hypogaea HOM05D007506 ORTHO05D008409 2.8e-14 82.0 50 84.0
arahy.Tifrunner.gnm1.ann1.MBF964 Arachis hypogaea HOM05D007506 ORTHO05D008409 2.8e-14 82.0 50 84.0
Lalb_Chr06g0166331 Lupinus albus HOM05D007506 ORTHO05D008409 3.7e-14 81.6 62 74.2
Lalb_Chr02g0146201 Lupinus albus HOM05D007506 ORTHO05D008409 7.7e-12 73.9 67 67.2
arahy.Tifrunner.gnm1.ann1.KXIJ9T Arachis hypogaea HOM05D007506 ORTHO05D008409 2.2e-11 72.4 57 66.7
RcHm_v2.0_Chr1g0331731 Rosa chinensis HOM05D007506 ORTHO05D008409 2.7e-09 65.5 72 63.9
Ciclev10017346m.g Citrus clementina HOM05D007506 ORTHO05D008409 8.0e-09 63.9 55 70.9
Cc02_g09560 Coffea canephora HOM05D007506 ORTHO05D008409 1.8e-08 62.8 59 62.7
Hund06790 Selenicereus undatus HOM05D007506 ORTHO05D008409 8.8e-08 60.5 76 55.3
Manes.07G086800 Manihot esculenta HOM05D007506 ORTHO05D008409 1.1e-07 60.1 55 72.7
THA.LOC104816468 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 2.6e-07 58.9 83 50.6
THA.LOC109117254 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 3.3e-07 58.5 71 52.1
Thecc.10G114000 Theobroma cacao HOM05D007506 ORTHO05D008409 3.3e-07 58.5 58 65.5
Atru.chr12.1049 Acer truncatum HOM05D007506 ORTHO05D008409 5.7e-07 57.8 57 68.4
arahy.Tifrunner.gnm1.ann1.X5G790 Arachis hypogaea HOM05D007506 ORTHO05D008409 5.7e-07 57.8 42 71.4
Sabra08G0010500 Salix brachista HOM05D007506 ORTHO05D008409 5.7e-07 57.8 58 72.4
arahy.Tifrunner.gnm1.ann1.C6ZGU5 Arachis hypogaea HOM05D007506 ORTHO05D008409 1.7e-06 56.2 38 73.7
Duzib106G0675 Durio zibethinus HOM05D007506 ORTHO05D008409 1.7e-06 56.2 59 61.0
EL10Ac4g08692 Beta vulgaris HOM05D007506 ORTHO05D008409 2.2e-06 55.8 62 54.8
Nitab4.5_0002586g0040 Nicotiana tabacum HOM05D007506 ORTHO05D008409 2.2e-06 55.8 68 52.9
FvH4_7g05151 Fragaria vesca HOM05D007506 ORTHO05D008409 2.8e-06 55.5 54 66.7
FAN05G5073 Fragaria x ananassa HOM05D007506 ORTHO05D008409 2.8e-06 55.5 54 66.7
arahy.Tifrunner.gnm1.ann1.HD4K12 Arachis hypogaea HOM05D000602 ORTHO05D085448 3.7e-06 55.1 41 68.3
Potri.010G240401 Populus trichocarpa HOM05D007506 ORTHO05D008409 3.7e-06 55.1 58 70.7
FAN28G2052 Fragaria x ananassa HOM05D007506 ORTHO05D008409 6.3e-06 54.3 52 67.3
MD07G1070900 Malus domestica HOM05D007506 ORTHO05D008409 6.3e-06 54.3 58 58.6
PGR142G2547 Punica granatum HOM05D007506 ORTHO05D008409 6.3e-06 54.3 73 50.7
FAN03G1835 Fragaria x ananassa HOM05D007506 ORTHO05D008409 8.2e-06 53.9 68 57.4


User provided reference genes

Program Settings