Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 4.7e-34 147.1 67 100.0
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 2.1e-26 121.7 79 75.9
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 7.1e-22 106.7 80 68.8
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 2.1e-21 105.1 80 66.2
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 4.5e-16 87.4 78 59.0
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 1.9e-14 82.0 74 60.8
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 7.1e-14 80.1 80 50.0
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 9.3e-14 79.7 72 58.3
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 1.6e-13 79.0 81 51.9
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 1.6e-13 79.0 81 51.9
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 1.6e-13 79.0 72 58.3
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 3.5e-13 77.8 83 48.2
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 1.0e-12 76.3 83 48.2
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 1.0e-12 76.3 84 46.4
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 1.8e-12 75.5 75 50.7
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 2.3e-12 75.1 75 52.0
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 2.3e-12 75.1 75 52.0
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 2.3e-12 75.1 88 44.3
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 6.7e-12 73.6 74 51.4
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 6.7e-12 73.6 78 47.4
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 6.7e-12 73.6 75 52.0
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 1.1e-11 72.8 78 48.7
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 7.4e-11 70.1 75 48.0
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 1.6e-10 68.9 47 61.7
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 1.6e-10 68.9 63 50.8
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 2.1e-10 68.6 45 64.4
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 2.8e-10 68.2 48 64.6
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 2.8e-10 68.2 48 64.6
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 2.8e-10 68.2 78 44.9
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 2.8e-10 68.2 78 44.9
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 3.7e-10 67.8 76 47.4
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 3.7e-10 67.8 79 44.3
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 4.8e-10 67.4 74 45.9
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 6.2e-10 67.0 48 62.5
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 6.2e-10 67.0 63 52.4
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 6.2e-10 67.0 88 40.9
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 8.2e-10 66.6 78 46.2
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 8.2e-10 66.6 52 57.7
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 1.1e-09 66.2 61 50.8
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 1.1e-09 66.2 69 49.3
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 1.1e-09 66.2 71 47.9
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 1.1e-09 66.2 78 44.9
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 1.8e-09 65.5 74 44.6
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 1.8e-09 65.5 78 44.9
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 2.4e-09 65.1 81 42.0
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 3.1e-09 64.7 61 49.2
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 3.1e-09 64.7 50 56.0
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 3.1e-09 64.7 79 45.6
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 3.1e-09 64.7 56 53.6
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 4.0e-09 64.3 75 46.7
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 4.0e-09 64.3 77 45.5
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 5.3e-09 63.9 31 80.6
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 5.3e-09 63.9 81 44.4
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 5.3e-09 63.9 73 42.5
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 6.9e-09 63.5 79 45.6
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 6.9e-09 63.5 73 41.1
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 9.0e-09 63.2 80 43.8
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 9.0e-09 63.2 76 44.7
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 1.5e-08 62.4 79 43.0
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 2.0e-08 62.0 62 46.8
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 2.0e-08 62.0 75 44.0
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 2.6e-08 61.6 82 42.7
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 3.4e-08 61.2 76 44.7
Cfa010446 Carpinus fangiana HOM05D006750 ORTHO05D008426 4.5e-08 60.8 45 60.0
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 7.6e-08 60.1 75 44.0
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 7.6e-08 60.1 87 44.8
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 7.6e-08 60.1 77 42.9
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 7.6e-08 60.1 72 40.3
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 7.6e-08 60.1 76 42.1
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 1.3e-07 59.3 75 44.0
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 1.3e-07 59.3 80 42.5
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 1.3e-07 59.3 74 44.6
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 1.7e-07 58.9 44 59.1
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 2.2e-07 58.5 40 57.5
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 2.9e-07 58.2 62 45.2
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 2.9e-07 58.2 38 57.9
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 3.8e-07 57.8 50 56.0
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 3.8e-07 57.8 80 41.2
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 4.9e-07 57.4 78 41.0
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 4.9e-07 57.4 61 45.9
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 6.5e-07 57.0 75 41.3
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 6.5e-07 57.0 80 41.2
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 8.4e-07 56.6 75 41.3
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 1.4e-06 55.8 38 60.5
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 1.4e-06 55.8 38 60.5
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 1.4e-06 55.8 38 60.5
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 1.4e-06 55.8 38 60.5
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 1.4e-06 55.8 38 60.5
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 1.4e-06 55.8 38 60.5
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 1.4e-06 55.8 38 60.5
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 1.9e-06 55.5 54 48.1
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 2.5e-06 55.1 80 37.5
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 2.5e-06 55.1 80 37.5
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 3.2e-06 54.7 80 41.2
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 5.5e-06 53.9 75 41.3
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 9.3e-06 53.1 45 53.3


User provided reference genes

Program Settings