Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 4.7e-308 1060.4 563 100.0
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 5.0e-286 987.3 565 92.9
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 5.7e-282 973.8 565 91.9
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.3e-257 892.9 565 83.9
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 3.3e-253 878.2 565 82.3
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 5.6e-253 877.5 564 83.0
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.3e-249 866.3 565 82.3
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 3.7e-249 864.8 565 82.3
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 1.1e-248 863.2 566 81.8
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 6.0e-247 857.4 565 81.1
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 1.1e-243 846.7 636 73.9
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 1.3e-228 796.6 503 84.9
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 2.6e-226 788.9 570 73.9
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 3.5e-223 778.5 565 74.5
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 6.0e-223 777.7 563 73.5
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.9e-221 772.7 565 73.6
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 2.5e-221 772.3 572 73.1
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 9.6e-221 770.4 571 71.3
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 3.7e-220 768.5 568 72.9
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 1.1e-219 766.9 565 73.3
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.4e-219 766.5 565 73.3
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.4e-219 766.5 566 71.9
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 3.1e-219 765.4 566 71.7
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 4.0e-219 765.0 571 71.8
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 4.0e-219 765.0 565 72.0
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 1.2e-218 763.5 571 70.9
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 2.0e-218 762.7 567 72.3
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 2.6e-218 762.3 572 70.8
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 4.5e-218 761.5 558 72.6
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 9.9e-218 760.4 571 71.6
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 1.7e-217 759.6 566 70.0
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 2.2e-217 759.2 567 71.3
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 4.9e-217 758.1 571 70.2
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.2e-216 755.4 580 71.2
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 3.5e-215 751.9 553 72.2
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 7.9e-215 750.7 562 71.0
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.0e-214 750.4 565 72.6
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 1.5e-213 746.5 576 69.4
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 3.7e-212 741.9 569 69.2
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 1.5e-210 736.5 566 70.8
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 4.5e-210 734.9 564 68.6
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 4.5e-210 734.9 570 69.1
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 5.8e-210 734.6 564 68.3
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 1.7e-209 733.0 573 68.2
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 2.1e-207 726.1 569 67.3
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 2.7e-207 725.7 567 68.3
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 7.9e-207 724.2 590 65.6
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 1.3e-206 723.4 564 68.1
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 5.1e-206 721.5 570 70.5
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 3.1e-203 712.2 568 65.8
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 2.0e-202 709.5 568 68.5
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 2.6e-202 709.1 568 65.8
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 6.5e-201 704.5 568 65.8
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 4.2e-200 701.8 569 66.8
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 3.6e-199 698.7 568 66.2
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 3.9e-198 695.3 574 65.7
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 1.7e-196 689.9 570 64.2
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.1e-195 687.2 565 65.7
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 4.5e-194 681.8 563 63.9
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 1.7e-193 679.9 565 63.4
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 1.7e-193 679.9 587 62.0
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 3.8e-193 678.7 564 64.2
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 6.5e-193 677.9 563 63.6
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 6.5e-193 677.9 558 65.8
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 8.5e-193 677.6 561 64.9
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 8.5e-193 677.6 568 64.6
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 2.5e-192 676.0 568 65.3
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 2.5e-192 676.0 564 67.9
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 4.2e-192 675.2 565 63.7
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 1.2e-191 673.7 563 63.2
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 1.2e-191 673.7 566 64.1
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 6.1e-191 671.4 561 64.0
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 2.3e-190 669.5 569 63.4
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 2.6e-189 666.0 565 62.8
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 2.6e-189 666.0 570 63.2
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 2.8e-188 662.5 566 62.7
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 2.4e-187 659.4 569 61.9
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 1.2e-186 657.1 563 62.2
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 3.2e-184 649.0 567 63.1
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 2.6e-178 629.4 529 65.0
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 1.0e-177 627.5 563 60.6
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 1.0e-177 627.5 563 60.6
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 6.5e-177 624.8 563 60.4
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 6.5e-177 624.8 563 60.4
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 1.1e-176 624.0 570 59.6
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 1.9e-176 623.2 563 60.2
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 4.4e-173 612.1 570 59.1
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 5.7e-173 611.7 568 59.3
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.4e-171 607.1 565 59.3
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 4.1e-171 605.5 575 57.9
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 7.0e-171 604.7 632 54.3
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 1.6e-170 603.6 566 57.4
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 4.5e-170 602.1 530 61.7
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 2.0e-157 560.1 484 63.2
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 1.9e-152 543.5 524 58.0
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 6.6e-145 518.5 407 66.3
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 6.2e-127 458.8 447 57.7
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 1.8e-118 430.6 557 44.7
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 2.9e-116 423.3 578 41.7
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 3.0e-113 413.3 403 59.8
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 2.4e-102 377.1 585 39.3
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 9.3e-99 365.2 224 80.8
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.2e-98 364.8 235 79.1
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 5.7e-96 355.9 589 37.7
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 5.7e-96 355.9 563 38.7
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 6.2e-95 352.4 301 66.1
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 3.7e-87 326.6 254 72.4
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 1.8e-86 324.3 297 61.3
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 1.1e-72 278.5 257 58.4
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 2.5e-67 260.8 236 57.6
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 4.1e-62 243.4 375 45.9
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 4.5e-53 213.4 151 71.5
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 3.8e-52 210.3 591 28.3
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 2.1e-50 204.5 211 55.0
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 1.4e-38 165.2 157 63.7
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 1.6e-34 151.8 149 55.7
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.1e-25 122.5 71 78.9
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 1.2e-13 82.4 54 77.8
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 6.8e-09 66.6 73 45.2
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 1.7e-07 62.0 69 49.3


User provided reference genes

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