Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 7.0e-71 270.4 127 100.0
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 6.0e-70 267.3 125 99.2
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 1.0e-69 266.5 126 98.4
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 3.0e-69 265.0 127 96.1
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 4.3e-68 261.2 124 96.0
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 3.6e-67 258.1 124 95.2
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 6.8e-66 253.8 123 93.5
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 1.9e-63 245.7 125 89.6
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 2.4e-63 245.4 124 87.9
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 2.4e-63 245.4 124 88.7
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 3.2e-63 245.0 123 87.8
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 3.2e-63 245.0 124 89.5
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 4.1e-63 244.6 123 90.2
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 5.4e-63 244.2 125 88.0
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 1.6e-62 242.7 125 86.4
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 2.1e-62 242.3 124 88.7
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 2.7e-62 241.9 124 86.3
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 3.5e-62 241.5 123 87.8
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 7.8e-62 240.4 125 84.0
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 7.8e-62 240.4 116 93.1
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 1.3e-61 239.6 123 86.2
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 1.3e-61 239.6 123 86.2
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 1.7e-61 239.2 125 87.2
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 2.3e-61 238.8 117 93.2
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 2.3e-61 238.8 123 86.2
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 6.6e-61 237.3 122 86.9
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 8.6e-61 236.9 123 83.7
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 1.1e-60 236.5 122 86.9
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 1.5e-60 236.1 123 84.6
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 1.5e-60 236.1 122 87.7
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 1.5e-60 236.1 124 85.5
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 1.5e-60 236.1 123 85.4
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 1.9e-60 235.7 123 86.2
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 1.9e-60 235.7 124 84.7
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 4.3e-60 234.6 126 84.9
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 4.3e-60 234.6 123 83.7
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 5.6e-60 234.2 123 82.9
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 5.6e-60 234.2 123 85.4
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 7.3e-60 233.8 123 84.6
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 7.3e-60 233.8 126 84.9
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 9.5e-60 233.4 126 82.5
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 1.2e-59 233.0 123 82.1
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 1.2e-59 233.0 122 82.8
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.2e-59 233.0 118 86.4
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 6.2e-59 230.7 124 83.1
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 8.1e-59 230.3 125 82.4
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 8.1e-59 230.3 123 86.2
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 1.1e-58 229.9 122 84.4
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 1.4e-58 229.6 122 83.6
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 1.8e-58 229.2 122 84.4
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 2.4e-58 228.8 125 83.2
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 4.0e-58 228.0 127 81.1
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 4.0e-58 228.0 118 85.6
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 5.2e-58 227.6 123 84.6
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 6.8e-58 227.3 124 83.1
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 8.9e-58 226.9 127 80.3
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 1.2e-57 226.5 125 81.6
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 1.5e-57 226.1 123 80.5
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 1.5e-57 226.1 117 92.3
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 4.4e-57 224.6 123 81.3
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 9.9e-57 223.4 117 83.8
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 1.3e-56 223.0 123 80.5
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 2.2e-56 222.2 117 82.9
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 2.2e-56 222.2 117 82.9
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 2.2e-56 222.2 117 82.9
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 3.8e-56 221.5 125 80.8
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 3.8e-56 221.5 125 79.2
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 8.4e-56 220.3 124 79.0
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 1.9e-55 219.2 117 82.1
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 1.9e-55 219.2 124 79.8
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 2.4e-55 218.8 125 80.8
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 3.2e-55 218.4 124 78.2
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 5.4e-55 217.6 123 78.9
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 5.4e-55 217.6 123 78.9
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 7.1e-55 217.2 128 81.2
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 9.2e-55 216.9 117 81.2
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 3.5e-54 214.9 127 78.7
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 4.6e-54 214.5 123 76.4
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 1.7e-53 212.6 145 70.3
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 1.7e-53 212.6 109 84.4
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 1.7e-53 212.6 116 81.0
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 5.1e-53 211.1 114 80.7
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 2.5e-52 208.8 169 62.7
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 1.6e-51 206.1 117 78.6
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.4e-50 203.0 117 78.6
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 1.4e-50 203.0 199 53.3
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 2.7e-46 188.7 126 69.0
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 2.3e-45 185.7 121 66.1
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 2.0e-41 172.6 87 86.2
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 1.7e-40 169.5 87 89.7
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 3.8e-40 168.3 90 82.2
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 3.2e-39 165.2 90 82.2
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 6.0e-38 161.0 107 61.7
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 1.0e-37 160.2 89 82.0
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 1.3e-37 159.8 89 76.4
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 5.3e-34 147.9 113 60.2
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 3.8e-32 141.7 83 75.9
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 1.6e-30 136.3 81 75.3
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 2.7e-30 135.6 77 77.9
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 3.1e-26 122.1 67 77.6
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 2.7e-22 109.0 71 73.2
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.5e-20 103.2 60 73.3
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 1.5e-17 93.2 51 78.4
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 7.6e-17 90.9 46 87.0
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 1.3e-16 90.1 81 54.3
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 3.8e-16 88.6 48 79.2
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 6.5e-16 87.8 47 83.0
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 1.1e-15 87.0 73 57.5
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 2.5e-12 75.9 40 82.5
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 3.3e-12 75.5 38 84.2
Oeu038782.2 Olea europaea HOM05D005968 ORTHO05D007158 6.5e-08 61.2 56 51.8


User provided reference genes

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