Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 4.6e-203 711.1 375 100.0
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 1.2e-174 616.7 370 86.8
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 1.5e-156 556.6 350 86.3
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 1.0e-154 550.4 373 78.6
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 9.7e-153 543.9 373 75.6
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 1.8e-151 539.7 375 78.7
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 7.0e-151 537.7 373 74.5
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 5.5e-148 528.1 363 76.9
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 4.0e-146 521.9 363 76.0
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 2.9e-128 462.6 372 69.6
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 3.0e-125 452.6 367 63.5
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 1.9e-124 449.9 374 63.6
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 9.5e-124 447.6 318 73.0
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 8.0e-123 444.5 316 77.2
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 8.0e-123 444.5 316 77.2
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 8.0e-123 444.5 369 63.4
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 2.0e-121 439.9 370 62.7
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 2.9e-120 436.0 372 63.4
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 6.4e-120 434.9 367 61.6
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 9.2e-119 431.0 376 62.2
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 1.6e-118 430.3 362 63.8
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 2.5e-116 422.9 388 58.2
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 5.6e-116 421.8 368 62.2
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 8.1e-115 417.9 367 61.6
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 4.0e-114 415.6 390 57.2
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 5.2e-114 415.2 360 60.3
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 5.2e-114 415.2 362 60.2
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 6.8e-114 414.8 360 60.6
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.1e-111 407.5 395 56.5
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 1.6e-110 403.7 350 62.0
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 2.1e-110 403.3 370 57.8
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 2.3e-109 399.8 387 56.6
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 1.6e-107 393.7 376 57.4
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 2.8e-107 392.9 386 56.2
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 6.8e-106 388.3 364 56.9
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 1.7e-104 383.6 350 58.6
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 2.9e-104 382.9 385 54.5
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 1.6e-102 377.1 370 56.5
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 1.6e-102 377.1 368 55.4
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 2.7e-102 376.3 373 55.8
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 1.0e-101 374.4 367 56.4
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 6.6e-101 371.7 364 56.3
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 3.6e-99 365.9 366 53.0
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 3.6e-99 365.9 366 53.0
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 3.6e-99 365.9 367 52.3
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 2.4e-98 363.2 395 52.4
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 5.8e-97 358.6 376 52.7
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 7.6e-97 358.2 372 53.5
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 2.2e-96 356.7 414 49.8
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 6.4e-96 355.1 465 46.0
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 1.1e-95 354.4 361 54.3
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 1.1e-95 354.4 375 52.0
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 9.3e-95 351.3 349 54.4
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 1.6e-94 350.5 374 52.1
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 2.7e-94 349.7 380 51.3
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 4.6e-94 349.0 389 50.6
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 6.0e-94 348.6 371 52.6
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 6.0e-94 348.6 411 49.4
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.0e-93 347.8 366 53.3
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 2.3e-93 346.7 367 52.9
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 1.9e-92 343.6 390 50.3
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 1.9e-92 343.6 435 47.6
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 1.6e-91 340.5 349 52.7
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 1.6e-91 340.5 416 49.3
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 3.1e-90 336.3 403 47.9
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 1.2e-89 334.3 387 48.6
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 1.2e-89 334.3 402 50.7
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 2.0e-89 333.6 317 56.5
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 1.7e-88 330.5 361 50.4
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 3.8e-88 329.3 420 46.7
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 3.2e-87 326.2 367 51.0
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 4.2e-87 325.9 368 50.3
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 4.6e-86 322.4 391 47.6
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 1.3e-85 320.9 285 60.0
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 1.8e-85 320.5 410 46.6
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 1.5e-84 317.4 366 47.5
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 1.9e-84 317.0 393 47.6
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 2.5e-84 316.6 391 48.3
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 6.2e-83 312.0 326 52.1
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 1.0e-80 304.7 444 42.6
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 3.8e-80 302.8 374 47.1
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 4.9e-80 302.4 280 59.3
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 2.3e-77 293.5 362 46.1
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 3.9e-77 292.7 350 48.3
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 4.8e-75 285.8 421 43.7
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 8.2e-75 285.0 302 53.0
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 2.4e-74 283.5 321 50.2
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 3.4e-73 279.6 370 45.1
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 7.6e-73 278.5 353 48.7
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 3.6e-62 243.0 362 40.1
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 1.4e-61 241.1 362 39.5
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 3.9e-61 239.6 278 50.7
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 3.4e-57 226.5 176 61.9
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 9.4e-55 218.4 421 37.5
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 1.1e-50 204.9 178 56.7
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 1.0e-45 188.3 161 55.3
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 8.8e-45 185.3 147 59.2
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 1.7e-43 181.0 250 41.2
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 4.5e-41 172.9 274 43.4
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 2.6e-36 157.1 166 55.4
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 4.8e-35 152.9 182 52.2
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 1.3e-32 144.8 139 59.0
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.1e-23 115.2 83 62.7
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 1.1e-23 115.2 83 62.7
SHI02845 Sapria himalayana HOM05D007038 ORTHO05D008893 3.0e-21 107.1 140 47.9
CDE02G0638 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 8.3e-19 99.0 155 40.0
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 1.8e-18 97.8 158 41.1
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 7.0e-18 95.9 329 26.1
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 3.9e-16 90.1 112 48.2
Mapoly0056s0109 Marchantia polymorpha HOM05D007038 ORTHO05D008893 1.4e-10 71.6 208 25.5
HPP92_020432 Vanilla planifolia HOM05D000367 ORTHO05D008893 7.0e-10 69.3 127 39.4
Ah.14g084570 Amaranthus hybridus HOM05D007038 ORTHO05D008893 1.3e-08 65.1 59 52.5


User provided reference genes

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