Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 0.0e+00 2221.0 1121 100.0
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 0.0e+00 1942.2 1121 88.0
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 0.0e+00 1909.8 1122 86.2
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 0.0e+00 1704.5 1122 77.5
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 0.0e+00 1676.0 1133 75.3
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 0.0e+00 1604.0 1134 72.0
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 0.0e+00 1585.5 1144 72.3
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 0.0e+00 1564.7 1137 71.1
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 0.0e+00 1529.2 1135 70.1
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 0.0e+00 1509.2 1130 69.3
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 0.0e+00 1224.9 1078 63.4
Psat4g039120 Pisum sativum HOM05D007419 ORTHO05D009327 0.0e+00 1171.0 693 84.8
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 0.0e+00 1165.2 1128 53.9
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 0.0e+00 1144.8 1138 54.0
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 0.0e+00 1103.6 1224 50.4
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 1.0e-306 1057.0 1146 51.0
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 3.3e-305 1052.0 1132 50.9
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 6.9e-303 1044.3 1137 50.2
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 1.5e-302 1043.1 1142 50.3
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 1.4e-300 1036.6 1139 50.0
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 7.1e-300 1034.2 1130 50.4
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 2.3e-298 1029.2 1140 50.1
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 1.9e-297 1026.2 1145 49.3
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.8e-295 1019.6 1141 49.3
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 2.0e-294 1016.1 1141 49.3
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 2.6e-294 1015.8 1136 48.7
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 3.5e-291 1005.4 1141 48.4
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 2.3e-290 1002.7 1142 48.7
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 7.4e-281 971.1 1142 48.6
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 2.7e-267 926.0 1139 46.4
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 4.6e-267 925.2 1030 48.5
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 2.0e-265 919.8 1192 45.7
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 2.9e-261 906.0 1169 45.7
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 5.0e-261 905.2 1154 44.0
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 8.5e-261 904.4 1139 46.6
Atru.chr7.1950 Acer truncatum HOM05D007419 ORTHO05D009327 3.7e-256 889.0 974 49.1
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 1.2e-254 884.0 1152 45.1
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 5.3e-247 858.6 1096 45.3
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 5.0e-245 852.0 1244 42.3
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 4.5e-238 828.9 1131 43.7
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 5.0e-237 825.5 1126 43.5
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 6.5e-237 825.1 1126 44.0
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 8.8e-234 814.7 1126 43.3
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 1.5e-233 813.9 1152 42.4
GSVIVG01015591001 Vitis vinifera HOM05D007419 ORTHO05D009327 3.8e-229 799.3 845 50.1
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 5.0e-229 798.9 1168 42.7
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 8.6e-229 798.1 1107 41.1
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 1.1e-228 797.7 1142 41.0
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 1.2e-227 794.3 1148 42.0
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 4.4e-225 785.8 1135 41.8
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 2.2e-224 783.5 1132 42.4
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 2.9e-224 783.1 1130 42.2
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 1.8e-223 780.4 1115 42.6
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 8.6e-221 771.5 1128 43.2
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 4.4e-217 759.2 1114 40.8
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 3.7e-216 756.1 1176 39.5
Manes.06G047100 Manihot esculenta HOM05D007419 ORTHO05D009327 4.1e-215 752.7 810 49.8
QL09p047989 Quercus lobata HOM05D007419 ORTHO05D009327 2.3e-205 720.3 940 43.3
vmacro07721 Vaccinium macrocarpon HOM05D007419 ORTHO05D009327 5.6e-204 715.7 1016 41.1
TWI34G0413 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 2.1e-203 713.8 943 43.3
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 6.8e-202 708.8 1135 39.7
CAN.G1315.3 Capsicum annuum HOM05D007419 ORTHO05D009327 1.5e-193 681.0 1003 41.3
Actinidia21952 Actinidia chinensis HOM05D007419 ORTHO05D009327 6.0e-190 669.1 829 46.0
Sc08g0006270 Simmondsia chinensis HOM05D007419 ORTHO05D009327 7.9e-182 642.1 868 42.3
Gohir.D13G206200 Gossypium hirsutum HOM05D007419 ORTHO05D009327 5.1e-181 639.4 692 48.8
Eucgr.C01385 Eucalyptus grandis HOM05D007419 ORTHO05D009327 2.9e-176 623.6 848 42.7
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 7.9e-174 615.5 1126 37.3
ATR0800G079 Amborella trichopoda HOM05D007419 ORTHO05D009327 2.8e-171 607.1 1018 36.0
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 3.4e-169 600.1 1124 37.0
Nn8g39549 Nelumbo nucifera HOM05D007419 ORTHO05D009327 2.5e-164 583.9 861 40.4
Psat4g039080 Pisum sativum HOM05D007419 ORTHO05D009327 2.0e-161 574.3 330 87.3
SEGI_05905 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 3.0e-157 560.5 1117 33.4
SEGI_33879 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 4.2e-151 540.0 1208 31.4
Os06g0173000 Oryza sativa ssp. japonica HOM05D007419 ORTHO05D009327 7.2e-135 486.1 1148 31.0
MBI15_g15110_MAGBIO Magnolia biondii HOM05D007419 ORTHO05D009327 1.2e-126 458.8 870 36.9
Hund26535 Selenicereus undatus HOM05D007419 ORTHO05D009327 2.3e-109 401.4 405 55.3
MD15G1167400 Malus domestica HOM05D007419 ORTHO05D009327 4.3e-103 380.6 297 64.3
Zm00001eb375320 Zea mays HOM05D007419 ORTHO05D009327 3.6e-94 350.9 833 29.9
AUR62011176 Chenopodium quinoa HOM05D007419 ORTHO05D009327 6.8e-85 320.1 308 54.9
GSVIVG01015592001 Vitis vinifera HOM05D007419 ORTHO05D009327 1.1e-71 276.2 275 56.7
Gohir.D13G206300 Gossypium hirsutum HOM05D007419 ORTHO05D009327 6.4e-67 260.4 274 52.9
SMO340G0190 Selaginella moellendorffii HOM05D007419 ORTHO05D009327 3.5e-65 254.6 1168 25.2
CAN.G778.5 Capsicum annuum HOM05D007419 ORTHO05D009327 2.1e-62 245.4 203 59.1
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 6.2e-62 243.8 396 37.4
QL09p046570 Quercus lobata HOM05D007419 ORTHO05D009327 3.2e-58 231.5 392 36.5
TWI34G1676 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 2.4e-53 215.3 213 55.9
Actinidia21951 Actinidia chinensis HOM05D007419 ORTHO05D009327 1.5e-52 212.6 266 49.2
CSS0048092 Camellia sinensis var. sinensis HOM05D007419 ORTHO05D009327 2.6e-52 211.8 231 53.7
Medtr7g110110 Medicago truncatula HOM05D007419 ORTHO05D009327 8.4e-51 206.8 124 82.3
SEGI_04675 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 2.7e-49 201.8 425 31.3
Oeu012224.2 Olea europaea HOM05D007419 ORTHO05D009327 1.6e-46 192.6 435 30.8
QL09p046488 Quercus lobata HOM05D007419 ORTHO05D009327 1.8e-40 172.6 154 58.4
QL09p046563 Quercus lobata HOM05D007419 ORTHO05D009327 1.8e-40 172.6 154 58.4
CBR_g6680 Chara braunii HOM05D007419 ORTHO05D009327 2.0e-39 169.1 1001 21.7
Oeu038257.1 Olea europaea HOM05D007419 ORTHO05D009327 4.4e-31 141.4 217 41.0
MSTRG.26436 Avicennia marina HOM05D007419 ORTHO05D009327 6.3e-30 137.5 144 50.0
Eucgr.C01386 Eucalyptus grandis HOM05D007419 ORTHO05D009327 4.1e-29 134.8 156 48.1
EL10Ac8g18720 Beta vulgaris HOM05D007419 ORTHO05D009327 3.5e-28 131.7 150 47.3
MD08G1122800 Malus domestica HOM05D007419 ORTHO05D009327 8.5e-27 127.1 85 71.8
Dinv10908 Davidia involucrata HOM05D007419 ORTHO05D009327 2.6e-23 115.5 115 59.1
SEGI_28656 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 5.9e-20 104.4 652 19.5
Nn8g39545 Nelumbo nucifera HOM05D007419 ORTHO05D009327 4.8e-14 84.7 84 51.2
Psat0s7003g0080 Pisum sativum HOM05D000746 ORTHO05D000573 5.2e-08 64.7 43 72.1


User provided reference genes

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