Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24669 Trifolium pratense HOM05D000937 ORTHO05D413230 6.6e-44 180.3 87 100.0
TPR.G17780 Trifolium pratense HOM05D000937 ORTHO05D000787 2.8e-18 95.1 54 77.8
Medtr5g033520 Medicago truncatula HOM05D000937 ORTHO05D000787 8.9e-17 90.1 54 74.1
Ca_04587_v3 Cicer arietinum L. HOM05D000937 ORTHO05D000787 6.0e-13 77.4 61 65.6
Psat2g102880 Pisum sativum HOM05D000937 ORTHO05D000787 7.8e-13 77.0 48 75.0
VMungo1215G0324 Vigna mungo HOM05D000937 ORTHO05D000787 5.6e-11 70.9 55 60.0
Glyma.01G027400 Glycine max HOM05D000937 ORTHO05D000787 2.8e-10 68.6 55 61.8
Lj2g0015590 Lotus japonicus HOM05D000937 ORTHO05D000787 2.8e-10 68.6 54 59.3
Phvul.002G059200 Phaseolus vulgaris HOM05D000937 ORTHO05D000787 8.1e-10 67.0 55 58.2
Lalb_Chr09g0326201 Lupinus albus HOM05D000937 ORTHO05D000787 1.8e-09 65.9 54 55.6
Glyma.02G037600 Glycine max HOM05D000937 ORTHO05D000787 2.4e-09 65.5 55 60.0
arahy.Tifrunner.gnm1.ann1.6N19J2 Arachis hypogaea HOM05D000937 ORTHO05D000787 3.1e-09 65.1 54 53.7
arahy.Tifrunner.gnm1.ann1.IWG05K Arachis hypogaea HOM05D000937 ORTHO05D000787 4.0e-09 64.7 54 51.9
Lj2g0010488 Lotus japonicus HOM05D000937 ORTHO05D000787 5.3e-09 64.3 52 57.7
Lj2g0017421 Lotus japonicus HOM05D000937 ORTHO05D000787 5.3e-09 64.3 52 57.7
arahy.Tifrunner.gnm1.ann1.35K0FL Arachis hypogaea HOM05D000937 ORTHO05D000787 6.9e-09 63.9 54 51.9
arahy.Tifrunner.gnm1.ann1.H8IU2A Arachis hypogaea HOM05D000937 ORTHO05D000787 1.2e-08 63.2 54 51.9
Psat2g093920 Pisum sativum HOM05D000937 ORTHO05D000787 9.9e-08 60.1 54 53.7
TPR.G38787 Trifolium pratense HOM05D000937 ORTHO05D000787 9.9e-08 60.1 54 51.9
CiPaw.05G184300 Carya illinoinensis HOM05D000937 ORTHO05D000787 1.7e-07 59.3 52 50.0
Medtr5g033510 Medicago truncatula HOM05D000937 ORTHO05D000787 2.2e-07 58.9 55 52.7
TPR.G37452 Trifolium pratense HOM05D000937 ORTHO05D000787 8.4e-07 57.0 54 48.1
arahy.Tifrunner.gnm1.ann1.U4WGIZ Arachis hypogaea HOM05D000937 ORTHO05D000787 1.4e-06 56.2 54 48.1
SalBow2G1055 Salvia bowleyana HOM05D000937 ORTHO05D000787 1.4e-06 56.2 54 51.9
Actinidia15080 Actinidia chinensis HOM05D000937 ORTHO05D000787 1.9e-06 55.8 52 51.9
Lalb_Chr16g0382041 Lupinus albus HOM05D000937 ORTHO05D000787 1.9e-06 55.8 54 48.1
arahy.Tifrunner.gnm1.ann1.Q4S157 Arachis hypogaea HOM05D000937 ORTHO05D000787 2.4e-06 55.5 54 48.1
Lsat_1_v5_gn_4_75461 Lactuca sativa HOM05D000937 ORTHO05D000787 2.4e-06 55.5 52 48.1
MSTRG.12856 Avicennia marina HOM05D000937 ORTHO05D000787 3.2e-06 55.1 61 45.9
Peaxi162Scf00089g01520 Petunia axillaris HOM05D000937 ORTHO05D000787 4.2e-06 54.7 52 51.9
Haze_12232 Corylus avellana HOM05D000937 ORTHO05D000787 5.4e-06 54.3 52 44.2
PSO210G6359 Papaver somniferum HOM05D000937 ORTHO05D000787 5.4e-06 54.3 57 57.9
Ah.03g133180 Amaranthus hybridus HOM05D000937 ORTHO05D000787 7.1e-06 53.9 50 50.0
Lalb_Chr12g0201791 Lupinus albus HOM05D000937 ORTHO05D000787 7.1e-06 53.9 54 48.1
CiPaw.11G022200 Carya illinoinensis HOM05D000937 ORTHO05D000787 9.3e-06 53.5 54 48.1
CiPaw.12G029300 Carya illinoinensis HOM05D000937 ORTHO05D000787 9.3e-06 53.5 54 48.1
Nitab4.5_0001284g0120 Nicotiana tabacum HOM05D000937 ORTHO05D000787 9.3e-06 53.5 52 50.0
Psat0s2597g0240 Pisum sativum HOM05D000937 ORTHO05D000787 9.3e-06 53.5 54 44.4
Rhsim12G0041600 Rhododendron simsii HOM05D000937 ORTHO05D000787 9.3e-06 53.5 53 52.8


User provided reference genes

Program Settings