Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24623 Trifolium pratense HOM05D002129 ORTHO05D002188 1.3e-100 370.2 260 100.0
TPR.G3374 Trifolium pratense HOM05D002129 ORTHO05D002188 4.2e-70 268.9 317 64.7
TPR.G3416 Trifolium pratense HOM05D002129 ORTHO05D002188 7.0e-41 171.8 236 53.0
TPR.G3450 Trifolium pratense HOM05D002129 ORTHO05D002188 6.1e-37 158.7 335 39.4
Medtr8g099275 Medicago truncatula HOM05D002129 ORTHO05D002188 7.5e-19 98.6 99 57.6
Psat7g027680 Pisum sativum HOM05D002129 ORTHO05D002188 1.4e-17 94.4 85 61.2
Lalb_Chr05g0224241 Lupinus albus HOM05D002129 ORTHO05D002188 7.0e-17 92.0 92 56.5
Glyma.05G215100 Glycine max HOM05D002129 ORTHO05D002188 1.2e-16 91.3 95 53.7
Lj4g0008940 Lotus japonicus HOM05D002129 ORTHO05D002188 2.3e-15 87.0 95 52.6
Medtr8g099280 Medicago truncatula HOM05D002129 ORTHO05D002188 1.9e-14 84.0 85 56.5
Glyma.08G021400 Glycine max HOM05D002129 ORTHO05D002188 3.3e-14 83.2 90 52.2
arahy.Tifrunner.gnm1.ann1.DN0YA4 Arachis hypogaea HOM05D002129 ORTHO05D002188 3.1e-12 76.6 99 47.5
arahy.Tifrunner.gnm1.ann1.P7UIV5 Arachis hypogaea HOM05D002129 ORTHO05D002188 6.8e-12 75.5 93 45.2
Prupe.5G115300 Prunus persica HOM05D002129 ORTHO05D002188 1.2e-11 74.7 85 48.2
arahy.Tifrunner.gnm1.ann1.Q3GPI2 Arachis hypogaea HOM05D002129 ORTHO05D002188 1.5e-11 74.3 99 46.5
Ciclev10018618m.g Citrus clementina HOM05D002129 ORTHO05D002188 4.4e-11 72.8 92 48.9
Sabra01G0070100 Salix brachista HOM05D002129 ORTHO05D002188 9.8e-11 71.6 85 44.7
TWI60G1278 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 2.9e-10 70.1 91 48.4
Dinv37550 Davidia involucrata HOM05D002129 ORTHO05D002188 1.4e-09 67.8 79 49.4
Sabra03G0098900 Salix brachista HOM05D002129 ORTHO05D002188 3.2e-09 66.6 80 43.8
Haze_08667 Corylus avellana HOM05D002129 ORTHO05D002188 4.1e-09 66.2 54 63.0
Cfa012842 Carpinus fangiana HOM05D002129 ORTHO05D002188 9.2e-09 65.1 54 63.0
Cpa.g.c43245 Carica papaya HOM05D002129 ORTHO05D002188 1.6e-08 64.3 87 43.7
Lalb_Chr09g0332631 Lupinus albus HOM05D002129 ORTHO05D002188 1.6e-08 64.3 72 48.6
Manes.01G045900 Manihot esculenta HOM05D002129 ORTHO05D002188 1.6e-08 64.3 91 41.8
CSS0045654 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 7.8e-08 62.0 62 51.6
Cc08_g15780 Coffea canephora HOM05D002129 ORTHO05D002188 7.8e-08 62.0 87 40.2
Potri.001G094200 Populus trichocarpa HOM05D002129 ORTHO05D002188 7.8e-08 62.0 56 60.7
Potri.003G137400 Populus trichocarpa HOM05D002129 ORTHO05D002188 7.8e-08 62.0 62 50.0
CsaV3_4G006420 Cucumis sativus L. HOM05D002129 ORTHO05D002188 3.0e-07 60.1 87 42.5
Medtr8g099290 Medicago truncatula HOM05D002129 ORTHO05D002188 3.0e-07 60.1 92 42.4
Thecc.03G293200 Theobroma cacao HOM05D002129 ORTHO05D002188 3.9e-07 59.7 64 50.0
Duzib205G0555 Durio zibethinus HOM05D002129 ORTHO05D002188 5.0e-07 59.3 91 35.2
CSS0018198 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 6.6e-07 58.9 91 35.2
Sed0022097 Sechium edule HOM05D002129 ORTHO05D002188 6.6e-07 58.9 86 45.3
TWI15G0725 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 1.1e-06 58.2 84 41.7
Actinidia01396 Actinidia chinensis HOM05D002129 ORTHO05D002188 1.5e-06 57.8 74 48.6
CSS0027740 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 1.9e-06 57.4 91 35.2
Ca_17495_v3 Cicer arietinum L. HOM05D002129 ORTHO05D002188 4.3e-06 56.2 40 67.5
Dinv37551 Davidia involucrata HOM05D002129 ORTHO05D002188 4.3e-06 56.2 78 47.4
MBI07_g09921_MAGBIO Magnolia biondii HOM05D002129 ORTHO05D002188 5.6e-06 55.8 70 44.3
MBI07_g09922_MAGBIO Magnolia biondii HOM05D002129 ORTHO05D002188 5.6e-06 55.8 70 45.7
MELO3C016308.2 Cucumis melo HOM05D002129 ORTHO05D002188 7.3e-06 55.5 90 40.0
Duzib068G1418 Durio zibethinus HOM05D002129 ORTHO05D002188 7.3e-06 55.5 54 53.7
Gohir.A02G102200 Gossypium hirsutum HOM05D002129 ORTHO05D002188 9.5e-06 55.1 57 52.6


User provided reference genes

Program Settings