Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24605 Trifolium pratense HOM05D000021 ORTHO05D000010 5.2e-112 408.7 399 100.0
Medtr5g082420 Medicago truncatula HOM05D000021 ORTHO05D000010 9.8e-18 95.5 242 57.0
LjContig00357g0014932 Lotus japonicus HOM05D000021 ORTHO05D000010 5.0e-14 83.2 59 62.7
Medtr5g082460 Medicago truncatula HOM05D000021 ORTHO05D000010 5.0e-14 83.2 59 61.0
Glyma.14G060400 Glycine max HOM05D000021 ORTHO05D000010 2.7e-12 77.4 52 65.4
Glyma.14G060300 Glycine max HOM05D000021 ORTHO05D000010 2.3e-11 74.3 52 63.5
Phvul.008G224900 Phaseolus vulgaris HOM05D000021 ORTHO05D000010 3.0e-11 73.9 59 55.9
Medtr2g072640 Medicago truncatula HOM05D000021 ORTHO05D000010 6.8e-11 72.8 60 56.7
TPR.G35952 Trifolium pratense HOM05D000021 ORTHO05D000010 6.8e-11 72.8 58 60.3
Phvul.008G225000 Phaseolus vulgaris HOM05D000021 ORTHO05D000010 8.8e-11 72.4 59 54.2
TPR.G18005 Trifolium pratense HOM05D000021 ORTHO05D000010 1.2e-10 72.0 59 57.6
arahy.Tifrunner.gnm1.ann1.2GFI5X Arachis hypogaea HOM05D000021 ORTHO05D000010 2.0e-10 71.2 52 59.6
arahy.Tifrunner.gnm1.ann1.6J1WII Arachis hypogaea HOM05D000021 ORTHO05D000010 2.0e-10 71.2 52 59.6
arahy.Tifrunner.gnm1.ann1.DC71XN Arachis hypogaea HOM05D000021 ORTHO05D000010 2.0e-10 71.2 52 59.6
VMungo0647G1073 Vigna mungo HOM05D000021 ORTHO05D000010 2.0e-10 71.2 40 77.5
Medtr5g082920 Medicago truncatula HOM05D000021 ORTHO05D000010 2.6e-10 70.9 161 84.5
arahy.Tifrunner.gnm1.ann1.AXP22Y Arachis hypogaea HOM05D000021 ORTHO05D000010 3.4e-10 70.5 58 50.0
Medtr5g082290 Medicago truncatula HOM05D000021 ORTHO05D000010 4.4e-10 70.1 57 56.1
arahy.Tifrunner.gnm1.ann1.NWES2J Arachis hypogaea HOM05D000021 ORTHO05D000010 7.5e-10 69.3 58 48.3
arahy.Tifrunner.gnm1.ann1.X9795X Arachis hypogaea HOM05D000021 ORTHO05D000010 7.5e-10 69.3 52 57.7
arahy.Tifrunner.gnm1.ann1.Y1KQLC Arachis hypogaea HOM05D000021 ORTHO05D000010 9.8e-10 68.9 58 48.3
Medtr5g082270 Medicago truncatula HOM05D000021 ORTHO05D000010 1.7e-09 68.2 52 61.5
Psat2g034160 Pisum sativum HOM05D000021 ORTHO05D000010 1.7e-09 68.2 63 52.4
Medtr1g029930 Medicago truncatula HOM05D000021 ORTHO05D000010 2.2e-09 67.8 49 61.2
arahy.Tifrunner.gnm1.ann1.JE4RQK Arachis hypogaea HOM05D000021 ORTHO05D000010 3.7e-09 67.0 49 61.2
Medtr2g072610 Medicago truncatula HOM05D000021 ORTHO05D000010 3.7e-09 67.0 57 54.4
Medtr2g072620 Medicago truncatula HOM05D000021 ORTHO05D000010 3.7e-09 67.0 57 54.4
Medtr8g036870 Medicago truncatula HOM05D000021 ORTHO05D000010 3.7e-09 67.0 58 51.7
Psat2g034000 Pisum sativum HOM05D000021 ORTHO05D000010 3.7e-09 67.0 58 51.7
Psat2g034040 Pisum sativum HOM05D000021 ORTHO05D000010 3.7e-09 67.0 58 51.7
TPR.G40036 Trifolium pratense HOM05D000021 ORTHO05D000010 3.7e-09 67.0 53 52.8
arahy.Tifrunner.gnm1.ann1.K0N9RV Arachis hypogaea HOM05D000021 ORTHO05D000010 4.9e-09 66.6 58 48.3
arahy.Tifrunner.gnm1.ann1.KXV2N3 Arachis hypogaea HOM05D000021 ORTHO05D000010 4.9e-09 66.6 58 50.0
arahy.Tifrunner.gnm1.ann1.J6FSGL Arachis hypogaea HOM05D000021 ORTHO05D000010 2.4e-08 64.3 58 46.6
TPR.G19851 Trifolium pratense HOM05D000021 ORTHO05D000010 2.4e-08 64.3 56 53.6
arahy.Tifrunner.gnm1.ann1.IR5FBL Arachis hypogaea HOM05D000021 ORTHO05D000010 3.1e-08 63.9 43 65.1
arahy.Tifrunner.gnm1.ann1.6M74BY Arachis hypogaea HOM05D000021 ORTHO05D000010 4.1e-08 63.5 49 57.1
arahy.Tifrunner.gnm1.ann1.KJZF9B Arachis hypogaea HOM05D000021 ORTHO05D000010 5.4e-08 63.2 57 49.1
Glyma.02G256100 Glycine max HOM05D000021 ORTHO05D000010 5.4e-08 63.2 56 58.9
TPR.G19856 Trifolium pratense HOM05D000021 ORTHO05D000010 5.4e-08 63.2 53 50.9
TPR.G35950 Trifolium pratense HOM05D000021 ORTHO05D000010 1.2e-07 62.0 54 51.9
TPR.G40689 Trifolium pratense HOM05D000021 ORTHO05D000010 2.0e-07 61.2 52 55.8
TPR.G35121 Trifolium pratense HOM05D000021 ORTHO05D000010 3.5e-07 60.5 56 51.8
QL04p089050 Quercus lobata HOM05D000021 ORTHO05D000010 4.5e-07 60.1 75 41.3
GSVIVG01032850001 Vitis vinifera HOM05D000021 ORTHO05D000010 4.5e-07 60.1 52 53.8
Medtr5g082370 Medicago truncatula HOM05D000021 ORTHO05D000010 7.7e-07 59.3 57 47.4
vmacro09220 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 7.7e-07 59.3 49 53.1
vmacro09221 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 7.7e-07 59.3 49 53.1
Thecc.10G022400 Theobroma cacao HOM05D000021 ORTHO05D000010 1.0e-06 58.9 56 46.4
Lj4g0028000 Lotus japonicus HOM05D000021 ORTHO05D000010 1.7e-06 58.2 52 57.7
QL04p089013 Quercus lobata HOM05D000021 ORTHO05D000010 1.7e-06 58.2 51 49.0
Duzib168G0927 Durio zibethinus HOM05D000021 ORTHO05D000010 2.3e-06 57.8 51 45.1
Psat2g034120 Pisum sativum HOM05D000021 ORTHO05D000010 2.3e-06 57.8 53 54.7
Psat2g034200 Pisum sativum HOM05D000021 ORTHO05D000010 2.3e-06 57.8 40 70.0
vmacro07647 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 2.3e-06 57.8 50 50.0
Eucgr.E01842 Eucalyptus grandis HOM05D000021 ORTHO05D000010 2.9e-06 57.4 65 43.1
MD02G1224600 Malus domestica HOM05D000021 ORTHO05D000010 2.9e-06 57.4 99 37.4
Nn5g27951 Nelumbo nucifera HOM05D000021 ORTHO05D000010 2.9e-06 57.4 51 45.1
Thecc.10G021700 Theobroma cacao HOM05D000021 ORTHO05D000010 2.9e-06 57.4 58 44.8
Cpa.g.sc112.36 Carica papaya HOM05D000021 ORTHO05D000010 3.8e-06 57.0 45 48.9
Eucgr.B02130 Eucalyptus grandis HOM05D000021 ORTHO05D000010 3.8e-06 57.0 49 51.0
CiPaw.01G269100 Carya illinoinensis HOM05D000021 ORTHO05D000010 5.0e-06 56.6 61 47.5
FAN01G0213 Fragaria x ananassa HOM05D000021 ORTHO05D000010 5.0e-06 56.6 57 52.6
Gorai.011G181600 Gossypium raimondii HOM05D000021 ORTHO05D000010 5.0e-06 56.6 61 47.5
Potri.017G152500 Populus trichocarpa HOM05D000021 ORTHO05D000010 5.0e-06 56.6 52 51.9
CiPaw.16G044300 Carya illinoinensis HOM05D000021 ORTHO05D000010 6.6e-06 56.2 50 54.0
Eucgr.G00456 Eucalyptus grandis HOM05D000021 ORTHO05D000010 6.6e-06 56.2 51 47.1
MD02G1224100 Malus domestica HOM05D000021 ORTHO05D000010 6.6e-06 56.2 51 45.1
Manes.17G105500 Manihot esculenta HOM05D000021 ORTHO05D000010 6.6e-06 56.2 42 59.5
Nn3g20019 Nelumbo nucifera HOM05D000021 ORTHO05D000010 6.6e-06 56.2 56 57.1
PGR142G2961 Punica granatum HOM05D000021 ORTHO05D000010 6.6e-06 56.2 51 49.0
Thecc.10G022100 Theobroma cacao HOM05D000021 ORTHO05D000010 6.6e-06 56.2 43 58.1
vmacro07540 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 6.6e-06 56.2 49 49.0
CiPaw.01G269400 Carya illinoinensis HOM05D000021 ORTHO05D000010 8.6e-06 55.8 62 46.8
Ciclev10003289m.g Citrus clementina HOM05D000021 ORTHO05D000010 8.6e-06 55.8 48 50.0
FvH4_7g24920 Fragaria vesca HOM05D000021 ORTHO05D000010 8.6e-06 55.8 57 50.9
FAN06G2787 Fragaria x ananassa HOM05D000021 ORTHO05D000010 8.6e-06 55.8 57 50.9
Medtr3g007730 Medicago truncatula HOM05D000021 ORTHO05D013562 8.6e-06 55.8 49 55.1
QL04p019607 Quercus lobata HOM05D000021 ORTHO05D000010 8.6e-06 55.8 51 47.1
QL04p019712 Quercus lobata HOM05D000021 ORTHO05D000010 8.6e-06 55.8 51 47.1
QL04p020165 Quercus lobata HOM05D000021 ORTHO05D000010 8.6e-06 55.8 51 47.1
TPR.G477 Trifolium pratense HOM05D000021 ORTHO05D000010 8.6e-06 55.8 52 53.8
TAR633G1557 Trochodendron aralioides HOM05D000021 ORTHO05D000010 8.6e-06 55.8 56 42.9


User provided reference genes

Program Settings