Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24602 Trifolium pratense HOM05D000091 ORTHO05D004312 2.2e-45 185.3 93 100.0
TPR.G23849 Trifolium pratense HOM05D000091 ORTHO05D004312 8.9e-31 136.7 126 64.3
Psat4g083560 Pisum sativum HOM05D000091 ORTHO05D004312 1.0e-26 123.2 129 57.4
Medtr4g095430 Medicago truncatula HOM05D000091 ORTHO05D004312 3.3e-25 118.2 128 56.2
Ca_13927_v3 Cicer arietinum L. HOM05D000091 ORTHO05D004312 8.9e-23 110.2 127 54.3
Phvul.003G236800 Phaseolus vulgaris HOM05D000091 ORTHO05D004312 6.4e-13 77.4 76 55.3
VMungo0251G0865 Vigna mungo HOM05D000091 ORTHO05D004312 4.2e-12 74.7 127 43.3
Glyma.05G104000 Glycine max HOM05D000091 ORTHO05D004312 2.7e-11 72.0 55 65.5
Glyma.17G163500 Glycine max HOM05D000091 ORTHO05D004312 1.0e-10 70.1 55 65.5
Lj4g0022563 Lotus japonicus HOM05D000091 ORTHO05D004312 1.0e-10 70.1 126 42.1
Phvul.002G012500 Phaseolus vulgaris HOM05D000091 ORTHO05D004312 3.9e-10 68.2 126 41.3
Ciclev10025164m.g Citrus clementina HOM05D000091 ORTHO05D004312 5.1e-10 67.8 129 41.1
Glyma.01G192300 Glycine max HOM05D000091 ORTHO05D004312 5.1e-10 67.8 122 41.8
Glyma.11G049800 Glycine max HOM05D000091 ORTHO05D004312 5.1e-10 67.8 126 40.5
Lj2g0023657 Lotus japonicus HOM05D000091 ORTHO05D004312 6.6e-10 67.4 125 41.6
Potri.007G053200 Populus trichocarpa HOM05D000091 ORTHO05D004312 1.1e-09 66.6 115 39.1
Lalb_Chr09g0323521 Lupinus albus HOM05D000091 ORTHO05D004312 1.9e-09 65.9 126 41.3
Sabra07G0046500 Salix brachista HOM05D000091 ORTHO05D004312 2.5e-09 65.5 116 35.3
Eucgr.I00715 Eucalyptus grandis HOM05D000091 ORTHO05D004312 3.3e-09 65.1 122 39.3
VMungo1215G0820 Vigna mungo HOM05D000091 ORTHO05D004312 9.6e-09 63.5 54 63.0
CiPaw.01G006800 Carya illinoinensis HOM05D000091 ORTHO05D004312 6.2e-08 60.8 127 34.6
QL06p039864 Quercus lobata HOM05D000091 ORTHO05D004312 6.2e-08 60.8 119 35.3
Manes.12G111300 Manihot esculenta HOM05D000091 ORTHO05D004312 8.1e-08 60.5 119 37.0
MD02G1182500 Malus domestica HOM05D000091 ORTHO05D004312 1.4e-07 59.7 123 39.0
arahy.Tifrunner.gnm1.ann1.4P7P8S Arachis hypogaea HOM05D000091 ORTHO05D004312 1.8e-07 59.3 76 46.1
arahy.Tifrunner.gnm1.ann1.GG2EN1 Arachis hypogaea HOM05D000091 ORTHO05D004312 1.8e-07 59.3 76 46.1
TPR.G20951 Trifolium pratense HOM05D000091 ORTHO05D004312 1.8e-07 59.3 57 56.1
Duzib147G1470 Durio zibethinus HOM05D000091 ORTHO05D004312 2.4e-07 58.9 126 35.7
HanXRQChr12g0373211 Helianthus annuus HOM05D000091 ORTHO05D004312 2.4e-07 58.9 70 51.4
Prupe.6G223600 Prunus persica HOM05D000091 ORTHO05D004312 2.4e-07 58.9 122 38.5
Cpa.g.sc6.45 Carica papaya HOM05D000091 ORTHO05D004312 3.1e-07 58.5 52 57.7
MD15G1293800 Malus domestica HOM05D000091 ORTHO05D004312 3.1e-07 58.5 124 37.9
COL.COLO4_11543 Corchorus olitorius HOM05D000091 ORTHO05D004312 5.3e-07 57.8 127 37.8
Haze_15307 Corylus avellana HOM05D000091 ORTHO05D004312 5.3e-07 57.8 78 44.9
Medtr5g016060 Medicago truncatula HOM05D000091 ORTHO05D004312 5.3e-07 57.8 54 59.3
Rhsim08G0095300 Rhododendron simsii HOM05D000091 ORTHO05D004312 5.3e-07 57.8 56 58.9
Ca_24719_v3 Cicer arietinum L. HOM05D000091 ORTHO05D004312 6.9e-07 57.4 54 57.4
Psat2g170320 Pisum sativum HOM05D000091 ORTHO05D004312 6.9e-07 57.4 54 61.1
PGR004G2563 Punica granatum HOM05D000091 ORTHO05D004312 6.9e-07 57.4 123 39.0
Cfa004104 Carpinus fangiana HOM05D000091 ORTHO05D004312 9.0e-07 57.0 123 36.6
Thecc.01G069200 Theobroma cacao HOM05D000091 ORTHO05D004312 1.2e-06 56.6 126 36.5
Atru.chr3.164 Acer truncatum HOM05D000091 ORTHO05D004312 2.0e-06 55.8 55 58.2
Atru.chr3.193 Acer truncatum HOM05D000091 ORTHO05D004312 2.0e-06 55.8 55 58.2
Dinv30068 Davidia involucrata HOM05D000091 ORTHO05D004312 2.0e-06 55.8 121 38.0
Lalb_Chr16g0389161 Lupinus albus HOM05D000091 ORTHO05D004312 2.0e-06 55.8 55 54.5
Rhsim10G0102500 Rhododendron simsii HOM05D000091 ORTHO05D004312 2.0e-06 55.8 67 50.7
TAR625G0159 Trochodendron aralioides HOM05D000091 ORTHO05D004312 2.0e-06 55.8 118 38.1
ClCG02G012380 Citrullus lanatus HOM05D000091 ORTHO05D004312 2.6e-06 55.5 52 53.8
Sed0017199 Sechium edule HOM05D000091 ORTHO05D004312 3.4e-06 55.1 53 52.8
TWI73G1019 Tripterygium wilfordii HOM05D000091 ORTHO05D004312 3.4e-06 55.1 126 35.7
vmacro05390 Vaccinium macrocarpon HOM05D000091 ORTHO05D004312 3.4e-06 55.1 69 47.8
CANSAT01G0967 Cannabis sativa HOM05D000091 ORTHO05D004312 4.4e-06 54.7 127 35.4
TAR376G0814 Trochodendron aralioides HOM05D000091 ORTHO05D004312 4.4e-06 54.7 111 35.1
Carub.0008s2710 Capsella rubella HOM05D000091 ORTHO05D004312 5.8e-06 54.3 57 57.9
BcaC06g34821 Brassica carinata HOM05D000091 ORTHO05D004312 7.6e-06 53.9 55 60.0
A07p16520 Brassica napus HOM05D000091 ORTHO05D004312 7.6e-06 53.9 55 60.0
C07p24220 Brassica napus HOM05D000091 ORTHO05D004312 7.6e-06 53.9 55 60.0
BolC7t42949H Brassica oleracea HOM05D000091 ORTHO05D004312 7.6e-06 53.9 55 60.0
BraA07t29376Z Brassica rapa HOM05D000091 ORTHO05D004312 7.6e-06 53.9 55 60.0
FvH4_1g17280 Fragaria vesca HOM05D000091 ORTHO05D004312 7.6e-06 53.9 64 54.7
FAN19G0541 Fragaria x ananassa HOM05D000091 ORTHO05D004312 7.6e-06 53.9 64 54.7
FAN23G0287 Fragaria x ananassa HOM05D000091 ORTHO05D004312 7.6e-06 53.9 64 54.7
FAN28G1296 Fragaria x ananassa HOM05D000091 ORTHO05D004312 7.6e-06 53.9 64 54.7
BcaC03g18376 Brassica carinata HOM05D000091 ORTHO05D004312 9.9e-06 53.5 55 54.5
A02p44250 Brassica napus HOM05D000091 ORTHO05D004312 9.9e-06 53.5 55 54.5
C02p64520 Brassica napus HOM05D000091 ORTHO05D004312 9.9e-06 53.5 55 54.5
BolC2t12516H Brassica oleracea HOM05D000091 ORTHO05D004312 9.9e-06 53.5 55 54.5
Cc07_g06850 Coffea canephora HOM05D000091 ORTHO05D004312 9.9e-06 53.5 54 55.6
Thhalv10003858m.g Eutrema salsugineum HOM05D000091 ORTHO05D004312 9.9e-06 53.5 57 56.1


User provided reference genes

Program Settings