Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24555 Trifolium pratense HOM05D000007 ORTHO05D000017 1.4e-59 232.6 108 100.0
Psat3g146120 Pisum sativum HOM05D000007 ORTHO05D000017 1.1e-27 126.7 101 60.4
Medtr0267s0050 Medicago truncatula HOM05D000007 ORTHO05D000017 2.2e-25 119.0 107 55.1
TPR.G17012 Trifolium pratense HOM05D000007 ORTHO05D000017 1.1e-24 116.7 104 51.9
TPR.G9294 Trifolium pratense HOM05D000007 ORTHO05D000017 4.2e-24 114.8 99 53.5
Medtr3g013950 Medicago truncatula HOM05D000007 ORTHO05D000017 6.1e-23 110.9 110 51.8
Medtr4g037465 Medicago truncatula HOM05D000007 ORTHO05D000017 2.6e-21 105.5 101 50.5
Medtr7g056820 Medicago truncatula HOM05D000007 ORTHO05D000017 1.2e-18 96.7 98 57.1
Medtr2g079810 Medicago truncatula HOM05D000007 ORTHO05D000017 3.4e-18 95.1 108 47.2
Medtr0128s0090 Medicago truncatula HOM05D000007 ORTHO05D000017 1.9e-16 89.4 101 44.6
Glyma.08G350400 Glycine max HOM05D000007 ORTHO05D000017 1.7e-12 76.3 102 42.2
Glyma.08G134900 Glycine max HOM05D000007 ORTHO05D000017 3.7e-12 75.1 102 43.1
Glyma.17G116300 Glycine max HOM05D000007 ORTHO05D000017 3.7e-12 75.1 102 42.2
Phvul.007G236000 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 4.1e-11 71.6 93 43.0
Glyma.05G166200 Glycine max HOM05D000007 ORTHO05D000017 5.3e-11 71.2 99 45.5
Glyma.08G352900 Glycine max HOM05D000007 ORTHO05D000017 5.3e-11 71.2 105 40.0
Phvul.007G235400 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 7.0e-11 70.9 105 38.1
Glyma.08G260800 Glycine max HOM05D000007 ORTHO05D000017 2.0e-10 69.3 107 40.2
Lalb_Chr11g0073821 Lupinus albus HOM05D000007 ORTHO05D000017 2.0e-10 69.3 72 50.0
Glyma.05G071600 Glycine max HOM05D000007 ORTHO05D000017 2.6e-10 68.9 105 38.1
Lalb_Chr12g0201651 Lupinus albus HOM05D000007 ORTHO05D000017 3.5e-10 68.6 103 40.8
Glyma.19G048600 Glycine max HOM05D000007 ORTHO05D000017 1.0e-09 67.0 109 41.3
Glyma.19G048700 Glycine max HOM05D000007 ORTHO05D000017 3.8e-09 65.1 109 40.4
Glyma.19G048500 Glycine max HOM05D000007 ORTHO05D000017 8.5e-09 63.9 109 40.4
Lj1g0005824 Lotus japonicus HOM05D000007 ORTHO05D000017 8.5e-09 63.9 109 37.6
Phvul.003G163000 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 8.5e-09 63.9 111 37.8
Glyma.19G048800 Glycine max HOM05D000007 ORTHO05D000017 1.5e-08 63.2 103 40.8
Ca_10652_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 1.9e-08 62.8 97 36.1
Glyma.19G048100 Glycine max HOM05D000007 ORTHO05D000017 1.9e-08 62.8 109 39.4
Glyma.19G048200 Glycine max HOM05D000007 ORTHO05D000017 1.9e-08 62.8 109 39.4
Glyma.19G048300 Glycine max HOM05D000007 ORTHO05D000017 1.9e-08 62.8 109 39.4
Glyma.19G049000 Glycine max HOM05D000007 ORTHO05D000017 1.9e-08 62.8 109 39.4
Medtr7g056727 Medicago truncatula HOM05D000007 ORTHO05D000017 3.2e-08 62.0 109 37.6
Glyma.08G229700 Glycine max HOM05D000007 ORTHO05D000017 5.5e-08 61.2 103 35.0
Psat0ss10486g0160 Pisum sativum HOM05D000007 ORTHO05D000017 7.2e-08 60.8 110 35.5
Medtr7g066850 Medicago truncatula HOM05D000007 ORTHO05D000017 1.2e-07 60.1 100 34.0
Medtr7g061060 Medicago truncatula HOM05D000007 ORTHO05D000017 2.1e-07 59.3 101 35.6
VMungo0720G2597 Vigna mungo HOM05D000007 ORTHO05D000017 2.1e-07 59.3 110 36.4
arahy.Tifrunner.gnm1.ann1.0HK6QF Arachis hypogaea HOM05D000007 ORTHO05D000017 2.7e-07 58.9 94 37.2
arahy.Tifrunner.gnm1.ann1.4EH76Y Arachis hypogaea HOM05D000007 ORTHO05D000017 2.7e-07 58.9 94 37.2
Medtr5g022420 Medicago truncatula HOM05D000007 ORTHO05D000017 4.7e-07 58.2 68 39.7
Ca_25968_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 6.1e-07 57.8 110 32.7
SalBow8G1506 Salvia bowleyana HOM05D000007 ORTHO05D000017 6.1e-07 57.8 72 43.1
SalBow8G3243 Salvia bowleyana HOM05D000007 ORTHO05D000017 6.1e-07 57.8 72 43.1
arahy.Tifrunner.gnm1.ann1.KM85J5 Arachis hypogaea HOM05D000007 ORTHO05D000017 8.0e-07 57.4 103 35.0
arahy.Tifrunner.gnm1.ann1.DVHS31 Arachis hypogaea HOM05D000007 ORTHO05D000017 1.0e-06 57.0 98 35.7
arahy.Tifrunner.gnm1.ann1.XAL4KA Arachis hypogaea HOM05D000007 ORTHO05D000017 1.0e-06 57.0 65 46.2
arahy.Tifrunner.gnm1.ann1.YU78V4 Arachis hypogaea HOM05D000007 ORTHO05D000017 1.0e-06 57.0 98 35.7
Medtr7g056710 Medicago truncatula HOM05D000007 ORTHO05D000017 1.0e-06 57.0 103 36.9
Medtr7g061050 Medicago truncatula HOM05D000007 ORTHO05D000017 1.0e-06 57.0 101 34.7
Medtr7g061090 Medicago truncatula HOM05D000007 ORTHO05D000017 1.0e-06 57.0 92 34.8
Phvul.007G235500 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 1.0e-06 57.0 69 44.9
arahy.Tifrunner.gnm1.ann1.T4T6Y3 Arachis hypogaea HOM05D000007 ORTHO05D000017 1.8e-06 56.2 65 47.7
Glyma.06G181300 Glycine max HOM05D000007 ORTHO05D000017 1.8e-06 56.2 102 37.3
Medtr2g046800 Medicago truncatula HOM05D000007 ORTHO05D000017 1.8e-06 56.2 74 44.6
Phvul.007G113100 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 1.8e-06 56.2 95 40.0
VMungo0720G2115 Vigna mungo HOM05D000007 ORTHO05D000017 1.8e-06 56.2 102 36.3
arahy.Tifrunner.gnm1.ann1.GL2JS2 Arachis hypogaea HOM05D000007 ORTHO05D000017 2.3e-06 55.8 93 35.5
arahy.Tifrunner.gnm1.ann1.ZMJT2S Arachis hypogaea HOM05D000007 ORTHO05D000017 2.3e-06 55.8 94 36.2
Lalb_Chr03g0041721 Lupinus albus HOM05D000007 ORTHO05D000017 2.3e-06 55.8 70 44.3
Lj1g0008967 Lotus japonicus HOM05D002794 ORTHO05D003763 3.0e-06 55.5 98 31.6
arahy.Tifrunner.gnm1.ann1.40BVCW Arachis hypogaea HOM05D000007 ORTHO05D000017 4.0e-06 55.1 94 36.2
Ca_06544_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 4.0e-06 55.1 94 37.2
Dinv38256 Davidia involucrata HOM05D000007 ORTHO05D000017 4.0e-06 55.1 101 34.7
Medtr7g066100 Medicago truncatula HOM05D000007 ORTHO05D000017 4.0e-06 55.1 106 34.0
Psat1g057600 Pisum sativum HOM05D000007 ORTHO05D000017 4.0e-06 55.1 73 41.1
Ca_25967_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 5.2e-06 54.7 110 30.9
Medtr2g010950 Medicago truncatula HOM05D000007 ORTHO05D000017 5.2e-06 54.7 96 38.5
Medtr7g056023 Medicago truncatula HOM05D000007 ORTHO05D000017 5.2e-06 54.7 103 35.9
arahy.Tifrunner.gnm1.ann1.L3R8Y5 Arachis hypogaea HOM05D000007 ORTHO05D000017 6.7e-06 54.3 65 46.2
arahy.Tifrunner.gnm1.ann1.NIV6PW Arachis hypogaea HOM05D000007 ORTHO05D000017 6.7e-06 54.3 94 36.2
Medtr7g070830 Medicago truncatula HOM05D000007 ORTHO05D000017 6.7e-06 54.3 92 35.9
arahy.Tifrunner.gnm1.ann1.HR5IAZ Arachis hypogaea HOM05D000007 ORTHO05D000017 8.8e-06 53.9 100 35.0
arahy.Tifrunner.gnm1.ann1.IGUP8B Arachis hypogaea HOM05D000007 ORTHO05D000017 8.8e-06 53.9 66 45.5
Ca_05139_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 8.8e-06 53.9 101 34.7
Glyma.18G168400 Glycine max HOM05D000007 ORTHO05D000017 8.8e-06 53.9 72 40.3
Medtr7g070880 Medicago truncatula HOM05D000007 ORTHO05D000017 8.8e-06 53.9 92 35.9
Phvul.007G235100 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 8.8e-06 53.9 105 37.1
Psat6g189920 Pisum sativum HOM05D000007 ORTHO05D000017 8.8e-06 53.9 71 40.8
Sopen05g003280 Solanum pennellii HOM05D000007 ORTHO05D000017 8.8e-06 53.9 72 38.9
TPR.G17061 Trifolium pratense HOM05D000007 ORTHO05D000017 8.8e-06 53.9 85 36.5


User provided reference genes

Program Settings