Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 2.4e-142 508.8 262 100.0
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 1.3e-127 459.9 262 87.4
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 1.7e-124 449.5 260 86.9
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 4.3e-123 444.9 257 87.9
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 3.7e-114 415.2 262 79.0
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 2.2e-111 406.0 263 77.2
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 8.4e-111 404.1 264 79.5
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 1.3e-108 396.7 262 75.6
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 1.3e-108 396.7 262 76.3
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 4.8e-106 388.3 262 74.8
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 1.4e-105 386.7 262 74.4
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 1.3e-90 337.0 251 68.9
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 1.2e-88 330.5 253 66.4
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 7.7e-88 327.8 248 68.1
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 6.5e-87 324.7 251 65.7
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 1.4e-86 323.6 251 65.3
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 1.9e-86 323.2 251 64.5
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 3.6e-85 318.9 251 64.5
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 1.8e-84 316.6 252 65.9
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 3.0e-84 315.8 251 63.7
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 8.8e-84 314.3 248 64.1
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 1.1e-83 313.9 241 65.6
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 2.0e-83 313.2 251 63.7
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 2.6e-83 312.8 251 62.5
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 4.4e-83 312.0 253 62.8
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 1.7e-82 310.1 257 61.9
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 2.4e-81 306.2 251 62.5
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 5.3e-81 305.1 248 63.7
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 1.5e-80 303.5 246 61.8
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 2.0e-80 303.1 251 61.8
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 5.0e-79 298.5 261 60.2
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 8.5e-79 297.7 251 63.3
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 8.5e-79 297.7 252 61.1
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 1.9e-78 296.6 259 58.3
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 1.9e-78 296.6 256 59.4
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 3.2e-78 295.8 251 58.6
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 4.2e-78 295.4 252 61.9
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 1.2e-77 293.9 252 60.7
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 3.6e-77 292.4 238 62.6
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 3.6e-77 292.4 230 65.7
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 1.8e-76 290.0 249 58.6
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 1.8e-76 290.0 249 63.1
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 3.0e-76 289.3 261 59.4
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 6.7e-76 288.1 292 54.5
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 1.1e-75 287.3 230 63.9
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 2.6e-75 286.2 249 61.4
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 3.3e-75 285.8 261 59.0
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 1.3e-74 283.9 251 57.4
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 4.8e-74 282.0 251 57.0
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 4.8e-74 282.0 251 58.2
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 1.1e-73 280.8 251 58.6
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.4e-73 280.4 261 58.2
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 1.8e-73 280.0 251 58.6
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 9.1e-73 277.7 262 56.5
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 9.1e-73 277.7 257 55.6
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 4.5e-72 275.4 251 58.2
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 5.9e-72 275.0 239 59.0
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 2.9e-71 272.7 240 57.5
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 3.8e-71 272.3 257 54.9
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 6.5e-71 271.6 248 54.4
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 6.5e-71 271.6 248 54.0
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 8.5e-71 271.2 247 56.3
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 8.5e-71 271.2 249 57.8
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 8.5e-71 271.2 238 58.4
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 1.5e-70 270.4 251 57.8
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 4.2e-70 268.9 248 53.2
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 5.5e-70 268.5 238 58.0
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 7.2e-70 268.1 252 54.4
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 2.1e-69 266.5 252 54.0
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 2.7e-69 266.2 252 53.2
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 3.6e-69 265.8 251 53.0
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 3.6e-69 265.8 251 53.0
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 3.6e-69 265.8 251 53.0
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 3.6e-69 265.8 230 60.4
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 6.1e-69 265.0 247 53.8
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 6.1e-69 265.0 247 53.8
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 6.1e-69 265.0 252 54.8
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 6.1e-69 265.0 204 66.2
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 5.7e-67 258.5 252 52.8
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 7.5e-67 258.1 228 61.0
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 9.7e-67 257.7 249 53.0
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 1.7e-66 256.9 252 52.8
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 1.7e-66 256.9 252 52.8
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 4.5e-64 248.8 256 51.2
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 5.9e-64 248.4 252 52.4
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 8.5e-63 244.6 277 47.7
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 5.5e-62 241.9 226 55.3
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 1.0e-60 237.7 217 53.9
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 1.0e-60 237.7 247 52.6
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 6.8e-60 235.0 245 52.2
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 5.7e-59 231.9 248 52.4
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 8.3e-58 228.0 252 49.6
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 4.1e-57 225.7 188 58.5
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 1.3e-55 220.7 329 41.3
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 8.6e-55 218.0 208 54.3
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 3.3e-54 216.1 248 46.8
Cpa.g.sc78.16 Carica papaya HOM05D006609 ORTHO05D008551 1.3e-50 204.1 223 50.7
DCAR_000757 Daucus carota HOM05D006609 ORTHO05D010582 1.2e-48 197.6 250 45.2
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 1.2e-48 197.6 165 62.4
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 9.5e-46 188.0 169 53.3
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 1.7e-42 177.2 149 57.0
ECA233G1748 Erigeron canadensis HOM05D006609 ORTHO05D008551 5.6e-38 162.2 137 60.6
unitig_93.g30708 Utricularia gibba HOM05D006609 ORTHO05D008551 3.4e-35 152.9 250 40.4
vmacro11054 Vaccinium macrocarpon HOM05D006609 ORTHO05D008551 2.3e-31 140.2 110 65.5
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 1.5e-30 137.5 142 49.3
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.3e-28 130.2 116 56.9
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.3e-28 130.2 116 56.9
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 6.6e-23 112.1 212 34.9
SEGI_38144 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 1.1e-20 104.8 89 55.1
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 3.1e-20 103.2 154 37.0
PRCOL_00006038 Prasinoderma coloniale HOM05D006609 ORTHO05D008551 8.9e-20 101.7 223 29.1
HanXRQChr16g0519661 Helianthus annuus HOM05D006609 ORTHO05D008551 2.6e-19 100.1 129 45.0
FAN24G1965 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.2e-18 97.1 105 51.4
SEGI_39152 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 1.9e-14 84.0 93 50.5
QL09p008974 Quercus lobata HOM05D006609 ORTHO05D008551 4.8e-13 79.3 75 56.0
Haze_26101 Corylus avellana HOM05D006609 ORTHO05D008551 1.1e-09 68.2 85 41.2


User provided reference genes

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