Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 7.8e-39 164.9 238 100.0
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 1.9e-37 160.2 238 88.2
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 7.8e-31 138.3 120 81.7
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 4.7e-28 129.0 237 92.8
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 9.0e-27 124.8 121 83.5
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 3.4e-26 122.9 123 73.2
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 3.2e-24 116.3 114 79.8
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 4.2e-24 115.9 121 71.9
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 2.7e-23 113.2 119 61.3
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 3.9e-22 109.4 114 71.1
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 5.1e-22 109.0 116 55.2
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 2.5e-21 106.7 116 71.6
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 9.6e-21 104.8 116 69.0
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 1.3e-20 104.4 115 67.8
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 2.1e-20 103.6 115 72.2
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 1.4e-19 100.9 115 53.0
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 2.4e-19 100.1 123 65.0
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 3.1e-19 99.8 115 65.2
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 4.0e-19 99.4 121 67.8
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 5.3e-19 99.0 118 70.3
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 1.2e-18 97.8 114 50.9
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 2.6e-18 96.7 118 50.0
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 2.6e-18 96.7 115 62.6
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 3.4e-18 96.3 115 63.5
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 5.8e-18 95.5 110 60.0
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 7.6e-18 95.1 120 68.3
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 7.6e-18 95.1 116 48.3
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 9.9e-18 94.7 120 64.2
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 1.3e-17 94.4 113 46.0
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 1.3e-17 94.4 107 54.2
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 1.7e-17 94.0 120 68.3
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 3.8e-17 92.8 107 54.2
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.9e-17 92.4 113 50.4
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 4.9e-17 92.4 120 65.8
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 6.4e-17 92.0 116 66.4
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 6.4e-17 92.0 110 52.7
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 8.4e-17 91.7 110 52.7
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.1e-16 91.3 120 59.2
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 1.4e-16 90.9 120 60.8
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 1.4e-16 90.9 118 59.3
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 1.9e-16 90.5 118 48.3
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.9e-16 90.5 118 63.6
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 7.1e-16 88.6 109 71.6
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 9.3e-16 88.2 120 62.5
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 1.2e-15 87.8 105 64.8
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 1.2e-15 87.8 105 64.8
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 1.2e-15 87.8 119 61.3
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.6e-15 87.4 109 46.8
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 2.1e-15 87.0 104 49.0
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 2.1e-15 87.0 104 49.0
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 2.1e-15 87.0 104 49.0
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 2.7e-15 86.7 108 63.0
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 3.5e-15 86.3 81 61.7
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 6.0e-15 85.5 77 67.5
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 1.0e-14 84.7 104 65.4
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 1.0e-14 84.7 78 62.8
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 1.3e-14 84.3 103 53.4
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 1.3e-14 84.3 112 48.2
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 2.3e-14 83.6 113 68.1
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 2.3e-14 83.6 114 59.6
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 2.3e-14 83.6 105 66.7
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 3.0e-14 83.2 73 65.8
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 3.9e-14 82.8 76 59.2
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 3.9e-14 82.8 120 66.7
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 5.1e-14 82.4 110 67.3
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 5.1e-14 82.4 74 63.5
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 6.7e-14 82.0 113 63.7
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 6.7e-14 82.0 119 63.0
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 6.7e-14 82.0 74 63.5
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 6.7e-14 82.0 118 63.6
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 8.7e-14 81.6 76 60.5
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 1.5e-13 80.9 80 57.5
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 1.5e-13 80.9 110 63.6
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 1.5e-13 80.9 113 60.2
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 3.3e-13 79.7 100 60.0
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 4.3e-13 79.3 113 61.9
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.3e-13 79.3 75 61.3
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.3e-13 79.3 75 61.3
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 4.3e-13 79.3 70 61.4
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 4.3e-13 79.3 100 69.0
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 5.6e-13 79.0 75 61.3
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 5.6e-13 79.0 120 60.0
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 1.6e-12 77.4 97 64.9
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 2.1e-12 77.0 143 39.2
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 2.1e-12 77.0 77 58.4
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 2.8e-12 76.6 77 58.4
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 3.7e-12 76.3 68 60.3
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 3.7e-12 76.3 123 50.4
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 4.8e-12 75.9 114 58.8
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 6.2e-12 75.5 77 57.1
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 1.1e-11 74.7 73 57.5
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 1.8e-11 73.9 121 52.9
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 4.0e-11 72.8 73 56.2
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 6.9e-11 72.0 111 58.6
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 6.9e-11 72.0 109 64.2
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 4.5e-10 69.3 117 40.2
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 7.6e-10 68.6 68 55.9
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 1.0e-09 68.2 75 54.7
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 1.0e-09 68.2 76 51.3
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 1.3e-09 67.8 111 41.4
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 4.9e-09 65.9 52 67.3
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.1e-07 60.5 75 52.0
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 4.6e-07 59.3 100 37.0
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 4.6e-07 59.3 67 49.3
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 1.0e-06 58.2 68 47.1
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 1.3e-06 57.8 85 45.9
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 2.3e-06 57.0 61 55.7
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 2.3e-06 57.0 70 48.6
EL10Ac6g14964 Beta vulgaris HOM05D027931 ORTHO05D007861 6.7e-06 55.5 105 57.1


User provided reference genes

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