Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2442 Trifolium pratense HOM05D007572 ORTHO05D009535 3.8e-75 284.6 135 100.0
Psat3g018080 Pisum sativum HOM05D007572 ORTHO05D009535 2.2e-70 268.9 135 94.1
Medtr7g110410 Medicago truncatula HOM05D007572 ORTHO05D009535 1.1e-69 266.5 135 93.3
Lj1g0010997 Lotus japonicus HOM05D007572 ORTHO05D009535 2.2e-62 242.3 135 85.9
Lalb_Chr04g0260171 Lupinus albus HOM05D007572 ORTHO05D009535 2.4e-61 238.8 135 83.0
Glyma.03G223300 Glycine max HOM05D007572 ORTHO05D009535 7.0e-61 237.3 136 83.8
arahy.Tifrunner.gnm1.ann1.W6UB1T Arachis hypogaea HOM05D007572 ORTHO05D009535 1.2e-60 236.5 135 82.2
arahy.Tifrunner.gnm1.ann1.XSK3JW Arachis hypogaea HOM05D007572 ORTHO05D009535 2.0e-60 235.7 135 81.5
Duzib138G0176 Durio zibethinus HOM05D007572 ORTHO05D009535 4.9e-54 214.5 135 71.9
Phvul.001G217100 Phaseolus vulgaris HOM05D007572 ORTHO05D009535 4.9e-54 214.5 135 78.5
Gohir.A07G131300 Gossypium hirsutum HOM05D007572 ORTHO05D009535 1.9e-53 212.6 135 71.9
Potri.002G188300 Populus trichocarpa HOM05D007572 ORTHO05D009535 9.2e-53 210.3 135 74.8
PGR142G3328 Punica granatum HOM05D007572 ORTHO05D009535 1.6e-52 209.5 135 71.9
Gohir.D07G135600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 1.3e-51 206.5 135 69.6
Sed0017651 Sechium edule HOM05D007572 ORTHO05D009535 5.0e-51 204.5 135 71.9
Manes.05G010100 Manihot esculenta HOM05D007572 ORTHO05D009535 1.5e-50 203.0 135 71.1
CsaV3_5G029750 Cucumis sativus L. HOM05D007572 ORTHO05D009535 1.9e-50 202.6 135 70.4
CiPaw.08G083700 Carya illinoinensis HOM05D007572 ORTHO05D009535 2.5e-50 202.2 135 71.9
MELO3C034050.2 Cucumis melo HOM05D007572 ORTHO05D009535 2.5e-50 202.2 135 71.1
TWI23G0551 Tripterygium wilfordii HOM05D007572 ORTHO05D009535 1.2e-49 199.9 135 71.9
Eucgr.K00578 Eucalyptus grandis HOM05D007572 ORTHO05D009535 3.1e-48 195.3 135 68.1
Dinv12090 Davidia involucrata HOM05D007572 ORTHO05D009535 8.9e-48 193.7 135 70.4
Nn3g21914 Nelumbo nucifera HOM05D007572 ORTHO05D009535 2.0e-47 192.6 135 66.7
VMungo1383G1880 Vigna mungo HOM05D007572 ORTHO05D009535 3.2e-45 185.3 125 74.4
Lsat_1_v5_gn_8_167180 Lactuca sativa HOM05D007572 ORTHO05D009535 5.4e-45 184.5 135 65.2
HanXRQChr13g0414461 Helianthus annuus HOM05D007572 ORTHO05D009535 2.1e-44 182.6 135 66.7
Sopen06g004090 Solanum pennellii HOM05D007572 ORTHO05D009535 6.0e-44 181.0 135 64.4
Hund11629 Selenicereus undatus HOM05D007572 ORTHO05D009535 1.7e-43 179.5 135 62.2
Nitab4.5_0003324g0080 Nicotiana tabacum HOM05D007572 ORTHO05D009535 3.0e-43 178.7 142 62.7
Sp5g01190 Schrenkiella parvula HOM05D007572 ORTHO05D009535 5.1e-43 177.9 139 66.9
CAN.G1280.44 Capsicum annuum HOM05D007572 ORTHO05D009535 1.1e-42 176.8 138 62.3
Solyc06g009340.4 Solanum lycopersicum HOM05D007572 ORTHO05D009535 1.1e-42 176.8 135 63.0
Aqoxy2G02521 Aquilegia oxysepala HOM05D007572 ORTHO05D009535 2.5e-42 175.6 135 66.7
Thhalv10006305m.g Eutrema salsugineum HOM05D007572 ORTHO05D009535 3.3e-42 175.3 139 66.2
AT3G62190 Arabidopsis thaliana HOM05D007572 ORTHO05D009535 5.6e-42 174.5 139 64.0
AL5G44940 Arabidopsis lyrata HOM05D007572 ORTHO05D009535 1.2e-41 173.3 139 64.0
BraA09t40838Z Brassica rapa HOM05D007572 ORTHO05D009535 2.1e-41 172.6 139 65.5
C08p37130 Brassica napus HOM05D007572 ORTHO05D009535 2.8e-41 172.2 139 65.5
BolC8t51291H Brassica oleracea HOM05D007572 ORTHO05D009535 2.8e-41 172.2 139 65.5
Carub.0005s2892 Capsella rubella HOM05D007572 ORTHO05D009535 8.9e-40 167.2 139 62.6
Oeu052583.1 Olea europaea HOM05D007572 ORTHO05D009535 2.0e-39 166.0 135 58.5
vmacro16962 Vaccinium macrocarpon HOM05D007572 ORTHO05D009535 2.0e-39 166.0 117 68.4
Cc01_g21830 Coffea canephora HOM05D007572 ORTHO05D009535 3.4e-39 165.2 135 60.0
ATR0796G039 Amborella trichopoda HOM05D007572 ORTHO05D009535 1.7e-38 162.9 135 60.7
Nitab4.5_0000363g0140 Nicotiana tabacum HOM05D007572 ORTHO05D009535 1.7e-38 162.9 114 66.7
CDE02G1692 Ceratophyllum demersum HOM05D007572 ORTHO05D009535 3.2e-37 158.7 132 58.3
PGSC0003DMG400007276 Solanum tuberosum HOM05D007572 ORTHO05D009535 1.2e-36 156.8 114 65.8
PSO210G6566 Papaver somniferum HOM05D007572 ORTHO05D009535 3.5e-36 155.2 145 55.2
Zm00001eb110000 Zea mays HOM05D007572 ORTHO05D009535 1.5e-34 149.8 135 56.3
Aa31LG10G16130 Aethionema arabicum HOM05D007572 ORTHO05D009535 5.6e-34 147.9 186 46.2
Ah.11g045850 Amaranthus hybridus HOM05D007572 ORTHO05D009535 2.8e-33 145.6 114 63.2
Rhsim01G0293200 Rhododendron simsii HOM05D007572 ORTHO05D009535 8.9e-32 140.6 191 46.1
A09p54260 Brassica napus HOM05D007572 ORTHO05D009535 3.4e-31 138.7 126 59.5
SalBow6G4072 Salvia bowleyana HOM05D007572 ORTHO05D009535 4.2e-29 131.7 135 53.3
Migut.D00021 Erythranthe guttata HOM05D007572 ORTHO05D009535 2.7e-28 129.0 146 48.6
Peaxi162Scf00058g02018 Petunia axillaris HOM05D007572 ORTHO05D009535 3.0e-27 125.6 115 55.7
SGA_v2.0_scaffold80G25682 Striga asiatica HOM05D007572 ORTHO05D009535 9.6e-26 120.6 173 41.0
BcaC07g40711 Brassica carinata HOM05D007572 ORTHO05D009535 1.3e-25 120.2 125 56.8
unitig_60.g25647 Utricularia gibba HOM05D007572 ORTHO05D009535 4.0e-24 115.2 141 47.5
Thecc.01G323600 Theobroma cacao HOM05D007572 ORTHO05D009535 6.9e-24 114.4 75 64.0
Pp3c17_19540 Physcomitrium patens HOM05D007572 ORTHO05D009535 3.4e-23 112.1 145 46.2
Thecc.01G323700 Theobroma cacao HOM05D000023 ORTHO05D000014 9.9e-23 110.5 64 78.1
Cfa004892 Carpinus fangiana HOM05D007572 ORTHO05D009535 8.4e-22 107.5 72 70.8
Gorai.001G147700 Gossypium raimondii HOM05D007572 ORTHO05D009535 1.9e-21 106.3 64 73.4
Duzib133G1540 Durio zibethinus HOM05D007572 ORTHO05D009535 2.4e-21 105.9 64 75.0
Sabra02G0167000 Salix brachista HOM05D007572 ORTHO05D009535 3.2e-21 105.5 92 56.5
AagrBONN_evm.TU.Sc2ySwM_228.110 Anthoceros agrestis HOM05D007572 ORTHO05D009535 7.1e-21 104.4 139 41.7
Haze_05130 Corylus avellana HOM05D007572 ORTHO05D009535 9.3e-21 104.0 79 63.3
AUR62011699 Chenopodium quinoa HOM05D007572 ORTHO05D009535 1.6e-20 103.2 64 71.9
QL12p034502 Quercus lobata HOM05D007572 ORTHO05D009535 4.6e-20 101.7 84 60.7
Gorai.001G147500 Gossypium raimondii HOM05D007572 ORTHO05D009535 7.9e-20 100.9 67 65.7
Sc05g0000110 Simmondsia chinensis HOM05D007572 ORTHO05D009535 1.0e-19 100.5 64 67.2
COL.COLO4_23146 Corchorus olitorius HOM05D000023 ORTHO05D000014 1.9e-18 96.3 52 80.8
DCAR_002931 Daucus carota HOM05D007572 ORTHO05D009535 3.3e-18 95.5 70 67.1
CBR_g88332 Chara braunii HOM05D007572 ORTHO05D009535 7.4e-18 94.4 163 35.0
MBI18_g10389_MAGBIO Magnolia biondii HOM05D007572 ORTHO05D009535 2.1e-17 92.8 68 61.8
CANSAT01G2141 Cannabis sativa HOM05D007572 ORTHO05D009535 8.1e-17 90.9 74 59.5
GSVIVG01028267001 Vitis vinifera HOM05D007572 ORTHO05D009535 8.1e-17 90.9 72 56.9
Atru.chr5.887 Acer truncatum HOM05D007572 ORTHO05D009535 1.8e-16 89.7 54 75.9
Glyma.19G220500 Glycine max HOM05D007572 ORTHO05D009535 3.1e-16 89.0 142 43.0
ClCG11G013240 Citrullus lanatus HOM05D007572 ORTHO05D009535 6.9e-16 87.8 55 72.7
Ciclev10024492m.g Citrus clementina HOM05D007572 ORTHO05D009535 1.2e-15 87.0 50 76.0
GSVIVG01028266001 Vitis vinifera HOM05D007572 ORTHO05D009535 2.0e-15 86.3 64 65.6
Sabra02G0166900 Salix brachista HOM05D000023 ORTHO05D000014 9.9e-15 84.0 51 72.5
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 1.7e-14 83.2 64 60.9
PSO761G0106 Papaver somniferum HOM05D007572 ORTHO05D009535 1.7e-14 83.2 68 61.8
Ciclev10023453m.g Citrus clementina HOM05D007572 ORTHO05D009535 2.9e-14 82.4 52 73.1
CARHR172530 Cardamine hirsuta HOM05D007572 ORTHO05D009535 4.2e-13 78.6 67 56.7
TAR636G1955 Trochodendron aralioides HOM05D007572 ORTHO05D009535 1.6e-12 76.6 52 65.4
SEGI_13004 Sequoiadendron giganteum HOM05D007572 ORTHO05D009535 2.7e-12 75.9 77 49.4
BcaB07g33721 Brassica carinata HOM05D007572 ORTHO05D009535 3.9e-11 72.0 60 58.3
Os07g0637150 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 5.1e-11 71.6 55 61.8
Atru.chr5.884 Acer truncatum HOM05D007572 ORTHO05D009535 1.1e-10 70.5 46 69.6
Os07g0637100 Oryza sativa ssp. japonica HOM05D007572 ORTHO05D009535 4.3e-10 68.6 54 57.4
MBI18_g10388_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 5.6e-10 68.2 53 62.3
Atru.chr5.886 Acer truncatum HOM05D007572 ORTHO05D009535 2.1e-09 66.2 60 55.0
Atru.chr5.889 Acer truncatum HOM05D007572 ORTHO05D009535 2.1e-09 66.2 60 55.0
Gohir.A12G120600 Gossypium hirsutum HOM05D007572 ORTHO05D009535 1.4e-08 63.5 52 61.5
AagrBONN_evm.TU.Sc2ySwM_362.2777 Anthoceros agrestis HOM05D007572 ORTHO05D009535 2.4e-08 62.8 97 38.1


User provided reference genes

Program Settings