Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 0.0e+00 1332.0 733 100.0
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 1.3e-310 1069.3 662 83.5
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 2.9e-310 1068.1 645 85.6
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 3.2e-309 1064.7 640 85.6
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 1.0e-254 883.6 673 71.9
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 5.6e-253 877.9 668 71.3
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 8.9e-243 844.0 664 67.9
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 9.8e-242 840.5 669 67.7
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 1.6e-239 833.2 668 68.3
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 1.2e-236 823.5 663 65.2
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 4.7e-236 821.6 663 65.2
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 4.1e-163 579.3 673 51.0
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 1.6e-159 567.4 602 52.5
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.4e-158 564.3 682 55.3
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 4.4e-157 559.3 628 51.0
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 7.5e-157 558.5 673 49.0
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 2.2e-156 557.0 666 49.2
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 2.0e-154 550.4 739 52.0
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 1.6e-151 540.8 640 50.3
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 1.0e-150 538.1 757 45.8
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 5.7e-149 532.3 649 55.5
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 8.3e-148 528.5 682 47.2
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 3.5e-146 523.1 609 50.9
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.5e-146 523.1 683 46.9
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 1.3e-145 521.2 652 47.9
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 1.7e-145 520.8 668 46.1
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 6.6e-145 518.8 681 46.0
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 6.6e-145 518.8 682 46.2
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 3.3e-144 516.5 675 46.5
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.6e-143 513.1 730 50.1
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 4.7e-143 512.7 718 52.2
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 2.2e-140 503.8 681 45.7
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 1.1e-139 501.5 568 52.3
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 3.2e-139 500.0 595 49.9
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 1.0e-137 495.0 660 51.7
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 4.3e-136 489.6 655 51.3
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 1.6e-135 487.6 689 50.8
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 9.2e-131 471.9 730 42.6
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 2.7e-130 470.3 673 43.1
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 5.6e-128 462.6 725 45.7
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 2.2e-124 450.7 660 41.2
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 8.3e-124 448.7 660 41.1
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 1.6e-122 444.5 674 40.9
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 2.7e-122 443.7 581 55.1
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 1.0e-121 441.8 730 40.8
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 1.7e-121 441.0 670 40.9
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 2.8e-119 433.7 509 49.9
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 3.8e-116 423.3 633 47.1
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 3.8e-116 423.3 655 48.2
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 3.5e-114 416.8 691 44.6
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 2.3e-113 414.1 718 38.7
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 5.1e-113 412.9 634 47.2
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 8.7e-113 412.1 539 46.2
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 1.6e-111 407.9 635 46.3
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 2.1e-111 407.5 587 43.3
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 4.7e-111 406.4 525 46.1
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 4.0e-110 403.3 591 41.6
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 5.2e-110 402.9 583 42.2
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 9.9e-109 398.7 647 46.8
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 9.9e-109 398.7 636 46.2
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 9.9e-109 398.7 600 42.3
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 2.9e-108 397.1 591 42.1
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 3.2e-107 393.7 599 42.7
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 3.2e-107 393.7 652 41.3
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 4.2e-107 393.3 658 38.3
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 1.5e-104 384.8 592 40.7
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 5.6e-104 382.9 622 39.7
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 1.6e-103 381.3 543 42.5
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 2.8e-103 380.6 593 40.6
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 4.8e-103 379.8 661 39.3
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 2.0e-101 374.4 548 43.1
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 4.5e-101 373.2 477 47.6
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 9.9e-101 372.1 618 39.5
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 1.4e-99 368.2 596 39.9
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 1.4e-99 368.2 580 42.6
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 3.7e-95 353.6 616 38.3
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 2.0e-93 347.8 562 47.7
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 1.7e-92 344.7 551 39.4
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 1.7e-92 344.7 459 44.7
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 1.2e-90 338.6 465 46.0
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 1.5e-85 321.6 435 46.0
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 3.4e-85 320.5 614 35.3
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 6.0e-82 309.7 570 35.1
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 4.2e-75 287.0 515 44.3
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 1.2e-74 285.4 479 38.4
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 4.3e-72 276.9 518 37.5
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 4.1e-70 270.4 427 40.3
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 2.6e-64 251.1 638 35.9
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 7.4e-64 249.6 651 33.6
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 4.5e-61 240.4 231 53.2
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 7.0e-54 216.5 488 33.6
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 5.2e-49 200.3 318 41.2
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 5.2e-49 200.3 318 41.2
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 1.1e-46 192.6 242 45.9
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 1.0e-44 186.0 453 32.0
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 3.8e-44 184.1 334 41.0
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.0e-41 176.0 175 56.0
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 2.8e-31 141.4 640 27.5
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 4.1e-30 137.5 300 34.3
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 9.5e-27 126.3 222 38.3
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 2.0e-24 118.6 81 76.5
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 6.6e-20 103.6 236 33.5
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 1.6e-18 99.0 276 33.7
Peaxi162Scf00097g02317 Petunia axillaris HOM05D006757 ORTHO05D004651 9.8e-16 89.7 78 56.4
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 2.2e-15 88.6 234 31.2
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 2.4e-14 85.1 210 37.1
Ciclev10006110m.g Citrus clementina HOM05D006757 ORTHO05D004651 2.4e-14 85.1 159 37.1
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 3.2e-14 84.7 57 68.4
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.3e-12 79.3 47 74.5
Cc11_g03350 Coffea canephora HOM05D006757 ORTHO05D004651 6.6e-12 77.0 78 47.4
vmacro10766 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 1.6e-10 72.4 203 29.6
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 2.1e-10 72.0 135 40.0
CDE04G0645 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 2.1e-10 72.0 249 26.1
Hma1.2p1_0933F.1_g238390 Hydrangea macrophylla HOM05D006757 ORTHO05D034208 2.9e-07 61.6 108 38.9


User provided reference genes

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