Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 7.0e-218 760.4 398 100.0
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 7.4e-167 590.9 404 81.7
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 9.3e-162 573.9 403 79.2
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 2.9e-139 499.2 398 75.1
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 5.5e-130 468.4 401 69.8
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 9.4e-130 467.6 401 69.6
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 1.8e-125 453.4 408 68.4
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 3.1e-125 452.6 406 68.2
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 9.8e-111 404.4 413 61.3
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 3.5e-108 396.0 407 60.9
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 5.4e-101 372.1 419 58.5
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 8.9e-96 354.8 396 57.1
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 2.4e-85 320.1 264 71.6
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 6.6e-83 312.0 339 54.6
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 1.5e-82 310.8 315 58.4
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 3.3e-82 309.7 234 70.1
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 2.8e-81 306.6 288 65.6
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 2.8e-81 306.6 314 58.0
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 4.7e-81 305.8 255 68.6
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 4.7e-81 305.8 404 50.0
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 8.1e-81 305.1 304 58.6
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 1.8e-80 303.9 356 50.3
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 4.0e-80 302.8 231 73.6
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 5.2e-80 302.4 380 51.1
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 4.4e-79 299.3 403 47.9
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 1.3e-78 297.7 350 52.0
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 1.3e-78 297.7 383 50.9
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 3.8e-78 296.2 357 52.1
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 8.4e-78 295.0 390 50.0
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 2.4e-77 293.5 290 56.9
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 4.2e-77 292.7 235 66.8
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 1.6e-76 290.8 315 55.9
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 2.1e-76 290.4 340 52.1
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 2.1e-76 290.4 375 51.2
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 4.6e-76 289.3 301 56.5
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 6.0e-76 288.9 364 51.4
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 1.3e-75 287.7 303 57.1
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 1.7e-75 287.3 377 46.4
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.7e-75 287.3 331 50.5
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 3.9e-75 286.2 269 56.9
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 6.6e-75 285.4 364 49.2
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.1e-74 284.6 305 55.4
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.1e-74 284.6 364 48.9
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.5e-74 284.3 268 59.0
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 1.9e-74 283.9 381 47.8
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.8e-73 280.0 372 47.0
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.6e-73 279.6 305 54.8
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.6e-73 279.6 305 54.8
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 6.2e-73 278.9 302 55.0
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.2e-73 278.9 385 47.0
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 1.8e-72 277.3 302 55.6
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 2.4e-72 276.9 254 60.2
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 6.9e-72 275.4 311 53.4
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.0e-71 273.9 224 63.8
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 8.4e-70 268.5 235 61.3
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 1.1e-69 268.1 235 61.3
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 1.1e-69 268.1 379 47.0
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 2.4e-69 266.9 391 46.5
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 4.2e-69 266.2 228 62.3
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 1.6e-68 264.2 305 52.8
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 1.6e-68 264.2 235 61.3
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 7.9e-68 261.9 268 54.9
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 7.9e-68 261.9 236 60.6
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 3.9e-67 259.6 350 46.6
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 6.6e-67 258.8 327 49.8
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 8.7e-67 258.5 286 54.5
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.1e-66 258.1 271 54.2
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 1.9e-66 257.3 253 59.7
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 1.9e-66 257.3 354 48.3
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 4.3e-66 256.1 353 46.2
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 4.3e-66 256.1 238 58.8
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 2.8e-65 253.4 309 51.1
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.4e-64 251.1 288 51.7
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 2.4e-64 250.4 289 54.7
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 9.0e-64 248.4 258 55.0
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 1.2e-63 248.1 327 48.6
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 2.6e-63 246.9 328 48.8
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 7.6e-63 245.4 336 48.5
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 9.9e-63 245.0 247 56.3
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 1.3e-62 244.6 303 49.5
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 3.8e-62 243.0 279 53.0
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 4.9e-62 242.7 265 55.1
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 4.2e-61 239.6 230 60.0
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 4.2e-61 239.6 256 56.2
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 7.1e-61 238.8 256 54.7
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 7.1e-61 238.8 248 57.7
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 9.3e-61 238.4 265 54.7
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 1.2e-60 238.0 244 57.0
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 1.2e-60 238.0 244 57.0
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 2.1e-60 237.3 266 52.3
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 2.7e-60 236.9 207 61.8
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 1.0e-59 235.0 280 52.9
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 1.3e-59 234.6 244 56.1
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 1.9e-58 230.7 286 50.0
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 3.3e-58 229.9 276 50.4
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 7.4e-58 228.8 276 50.0
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 4.0e-56 223.0 192 63.5
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 4.0e-56 223.0 351 43.6
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 2.5e-53 213.8 296 46.6
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 1.4e-48 198.0 283 42.8
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 6.5e-46 189.1 170 61.2
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 1.9e-45 187.6 182 59.9
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 2.7e-44 183.7 190 55.8
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 3.9e-43 179.9 322 42.2
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 5.7e-42 176.0 156 61.5
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 2.2e-38 164.1 217 48.8
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 8.2e-33 145.6 290 35.2
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.0e-30 138.7 114 63.2
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 1.7e-30 137.9 99 70.7
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 3.8e-30 136.7 153 49.7
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 7.2e-29 132.5 260 38.8
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 2.1e-28 131.0 256 41.0
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 5.0e-22 109.8 174 35.1
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 1.0e-19 102.1 223 32.3
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 4.1e-16 90.1 61 70.5
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 4.7e-12 76.6 55 69.1
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 4.7e-12 76.6 122 41.0
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 1.4e-11 75.1 52 73.1
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 3.7e-09 67.0 154 34.4
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 9.1e-08 62.4 113 45.1


User provided reference genes

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