Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 6.5e-195 685.3 904 100.0
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 4.2e-77 293.9 408 71.8
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 2.8e-73 281.2 203 80.8
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 4.7e-60 237.3 204 66.7
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 2.0e-58 231.9 204 64.7
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 9.2e-56 223.0 196 63.8
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 1.6e-47 195.7 197 58.4
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 1.0e-46 193.0 197 57.4
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 5.2e-43 180.6 163 63.2
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 5.4e-40 170.6 161 60.9
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 1.3e-38 166.0 204 53.4
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 8.7e-30 136.7 217 46.5
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 2.8e-28 131.7 217 45.2
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 4.0e-27 127.9 195 45.6
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 6.9e-27 127.1 203 43.8
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 1.5e-26 125.9 204 45.6
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 2.6e-26 125.2 202 42.6
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 4.4e-26 124.4 192 45.8
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 5.8e-26 124.0 193 46.1
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 1.3e-25 122.9 196 45.9
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 1.7e-25 122.5 195 44.1
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 1.7e-25 122.5 196 43.9
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 6.4e-25 120.6 203 43.3
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 1.9e-24 119.0 193 45.1
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 1.9e-24 119.0 195 42.6
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 2.4e-24 118.6 195 44.1
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 5.4e-24 117.5 194 43.3
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 7.1e-24 117.1 178 44.9
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 9.3e-24 116.7 211 41.2
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 4.6e-23 114.4 182 40.1
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 6.0e-23 114.0 236 39.0
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 6.0e-23 114.0 212 41.0
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 1.0e-22 113.2 212 40.6
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 1.7e-22 112.5 190 41.1
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 1.7e-22 112.5 216 39.8
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 8.7e-22 110.2 194 38.7
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.1e-21 109.8 215 42.3
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 1.1e-21 109.8 195 39.0
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 1.5e-21 109.4 200 38.5
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 1.9e-21 109.0 194 38.7
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 1.9e-21 109.0 190 40.0
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 3.3e-21 108.2 213 42.7
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 3.3e-21 108.2 213 42.7
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 4.3e-21 107.8 206 41.7
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 4.3e-21 107.8 199 41.7
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 4.3e-21 107.8 205 44.4
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 4.3e-21 107.8 207 42.0
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.3e-20 106.3 215 40.5
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 1.3e-20 106.3 200 40.5
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 1.3e-20 106.3 217 39.2
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 1.6e-20 105.9 222 38.3
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 6.2e-20 104.0 184 43.5
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 1.1e-19 103.2 202 41.6
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 3.1e-19 101.7 201 37.8
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 6.9e-19 100.5 201 35.3
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 6.9e-19 100.5 177 39.5
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 2.0e-18 99.0 205 37.6
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 3.4e-18 98.2 213 41.3
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 7.6e-18 97.1 192 38.0
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 1.3e-17 96.3 191 38.2
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 2.9e-17 95.1 209 36.4
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 3.8e-17 94.7 216 36.1
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 2.4e-16 92.0 199 37.2
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 4.2e-16 91.3 220 35.5
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 4.2e-16 91.3 212 35.8
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 4.2e-16 91.3 203 36.9
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 2.7e-15 88.6 213 36.2
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 3.5e-15 88.2 89 51.7
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 1.3e-14 86.3 211 34.6
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 1.5e-13 82.8 210 36.2
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 1.9e-13 82.4 189 34.4
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 9.6e-13 80.1 178 37.6
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 1.3e-12 79.7 145 37.2
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 1.6e-12 79.3 203 32.5
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 2.1e-12 79.0 178 36.0
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 2.1e-12 79.0 180 34.4
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 2.1e-12 79.0 216 33.8
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 3.7e-12 78.2 175 39.4
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 4.8e-12 77.8 175 38.9
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 6.2e-12 77.4 200 34.5
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 8.1e-12 77.0 177 37.3
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 1.1e-11 76.6 186 37.6
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 1.1e-11 76.6 177 36.7
CARHR133260 Cardamine hirsuta HOM05D006830 ORTHO05D008119 2.4e-11 75.5 181 36.5
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 2.4e-11 75.5 65 60.0
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 3.1e-11 75.1 200 33.5
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 3.1e-11 75.1 200 33.5
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 5.3e-11 74.3 186 35.5
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 5.3e-11 74.3 101 47.5
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 5.3e-11 74.3 177 36.2
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 9.0e-11 73.6 101 47.5
Medtr7g073690 Medicago truncatula HOM05D023663 ORTHO05D011835 2.0e-10 72.4 301 35.9
HPP92_012541 Vanilla planifolia HOM05D006830 ORTHO05D008119 7.6e-10 70.5 62 54.8
vmacro20384 Vaccinium macrocarpon HOM05D006830 ORTHO05D008119 2.9e-09 68.6 216 35.2
HPP92_012572 Vanilla planifolia HOM05D006830 ORTHO05D008119 2.9e-09 68.6 62 54.8
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 1.1e-08 66.6 216 31.5
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 1.4e-08 66.2 227 30.8
VMungo1383G1674 Vigna mungo HOM05D023663 ORTHO05D011835 1.9e-08 65.9 138 52.9
Zm00001eb015900 Zea mays HOM05D006830 ORTHO05D008119 2.4e-08 65.5 105 38.1
Os03g0333000 Oryza sativa ssp. japonica HOM05D006830 ORTHO05D008119 3.2e-08 65.1 64 48.4
Lsat_1_v5_gn_5_151701 Lactuca sativa HOM05D006830 ORTHO05D008119 2.1e-07 62.4 62 56.5
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 3.5e-07 61.6 169 31.4
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 7.9e-07 60.5 178 29.2
ATR1127G221 Amborella trichopoda HOM05D006830 ORTHO05D008119 5.1e-06 57.8 34 67.6


User provided reference genes

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