Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 3.9e-182 641.3 329 100.0
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 4.7e-151 538.1 332 82.2
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 7.8e-146 520.8 334 80.2
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 1.2e-143 513.5 331 79.8
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 4.1e-139 498.4 333 78.1
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 2.1e-135 486.1 333 74.5
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 2.8e-135 485.7 334 75.1
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 1.4e-131 473.4 333 72.7
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 3.5e-130 468.8 332 72.6
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 1.7e-129 466.5 338 71.3
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 3.0e-129 465.7 332 74.1
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 3.9e-129 465.3 338 71.0
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 2.7e-114 416.0 339 62.8
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 1.9e-112 409.8 350 60.3
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 5.2e-110 401.7 345 62.0
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 6.9e-110 401.4 351 60.1
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 2.5e-104 382.9 341 58.7
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 2.8e-103 379.4 334 59.3
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 8.1e-103 377.9 374 55.3
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 4.5e-101 372.1 334 57.5
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 3.2e-99 365.9 334 54.8
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 4.2e-99 365.5 334 58.1
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 1.2e-98 364.0 337 54.6
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 6.0e-98 361.7 329 56.5
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 1.5e-96 357.1 336 54.2
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 3.3e-96 355.9 334 56.0
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 5.6e-96 355.1 334 53.9
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 2.1e-95 353.2 358 53.9
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 3.7e-95 352.4 349 54.7
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 5.3e-94 348.6 333 53.2
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 1.2e-93 347.4 344 51.7
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 1.5e-93 347.1 359 52.6
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 3.4e-93 345.9 308 57.5
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 3.8e-92 342.4 336 53.9
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 3.8e-92 342.4 343 53.9
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 1.1e-91 340.9 333 50.5
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 2.4e-91 339.7 345 51.9
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 4.2e-91 339.0 334 51.8
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 5.5e-91 338.6 336 53.6
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 9.3e-91 337.8 336 51.8
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 2.1e-90 336.7 333 52.6
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 2.7e-90 336.3 333 52.6
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 2.7e-90 336.3 340 53.8
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 6.0e-90 335.1 333 53.2
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 6.0e-90 335.1 344 53.5
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 6.0e-90 335.1 332 52.4
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 6.0e-90 335.1 332 52.4
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 1.0e-89 334.3 339 52.2
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 1.3e-89 334.0 333 52.3
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 1.3e-89 334.0 332 50.0
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 1.8e-89 333.6 331 53.5
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 3.0e-89 332.8 331 53.5
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 3.9e-89 332.4 334 51.8
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 5.1e-89 332.0 329 50.5
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 3.3e-88 329.3 350 52.3
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 1.2e-85 320.9 337 48.4
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 1.2e-85 320.9 337 48.7
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 1.5e-85 320.5 337 48.1
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 2.6e-85 319.7 339 49.0
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 1.1e-83 314.3 341 48.1
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 2.5e-83 313.2 368 46.5
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 4.2e-83 312.4 318 50.0
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 1.2e-82 310.8 358 46.1
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 2.1e-82 310.1 384 44.8
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 2.7e-82 309.7 338 47.0
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 4.6e-82 308.9 310 49.7
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 4.6e-82 308.9 349 49.9
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 1.3e-81 307.4 305 51.5
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 3.9e-81 305.8 311 50.8
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 6.7e-81 305.1 270 57.8
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 1.1e-80 304.3 361 46.3
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 1.1e-80 304.3 363 45.2
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 1.5e-80 303.9 346 46.0
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 2.5e-80 303.1 339 47.2
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 3.3e-80 302.8 365 44.7
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 1.3e-79 300.8 342 46.5
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 2.2e-79 300.1 319 47.3
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 2.2e-79 300.1 311 50.8
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 6.3e-79 298.5 361 44.0
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 1.4e-78 297.4 338 46.4
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 1.8e-78 297.0 309 51.1
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 2.6e-77 293.1 319 47.3
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 2.6e-77 293.1 305 49.2
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 5.9e-77 292.0 334 45.5
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 1.3e-76 290.8 319 47.0
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 1.7e-76 290.4 355 47.6
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 2.2e-76 290.0 336 47.3
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 6.5e-76 288.5 326 45.4
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 7.2e-75 285.0 289 53.3
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 9.4e-75 284.6 352 43.8
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 1.2e-74 284.3 370 41.6
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 2.7e-74 283.1 304 46.4
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 3.6e-74 282.7 346 44.5
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 3.6e-74 282.7 304 46.4
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 1.4e-73 280.8 320 45.9
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 1.4e-73 280.8 361 46.8
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 1.8e-73 280.4 304 46.1
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 3.7e-71 272.7 256 56.2
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 1.9e-67 260.4 345 45.2
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 1.5e-61 240.7 212 53.3
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 1.8e-54 217.2 210 53.8
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 3.1e-54 216.5 296 41.2
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 3.1e-54 216.5 188 53.2
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 4.7e-50 202.6 177 55.4
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 1.9e-43 180.6 328 37.2
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 2.5e-43 180.3 330 35.5
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 2.5e-43 180.3 345 35.1
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 1.4e-41 174.5 241 38.6
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 4.0e-41 172.9 330 35.5
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 9.8e-40 168.3 121 70.2
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 2.0e-37 160.6 213 37.6
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 4.2e-35 152.9 242 34.3
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 5.5e-35 152.5 211 38.9
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 9.5e-35 151.8 206 37.4
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.6e-34 149.8 195 39.0
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 8.0e-34 148.7 195 39.5
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.4e-33 147.9 196 39.3
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 1.8e-33 147.5 215 36.3
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 3.0e-33 146.7 117 66.7
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 4.0e-33 146.4 199 37.2
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 7.8e-29 132.1 228 36.4
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 9.5e-27 125.2 150 41.3
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 2.9e-23 113.6 162 35.8
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 1.7e-20 104.4 82 62.2
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 1.3e-15 88.2 129 40.3
unitig_46.g18639 Utricularia gibba HOM05D006196 ORTHO05D007758 8.1e-10 68.9 100 37.0
CDE04G2496 Ceratophyllum demersum HOM05D000548 ORTHO05D001552 8.3e-07 58.9 152 29.6


User provided reference genes

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