Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24244 Trifolium pratense HOM05D005432 ORTHO05D004599 3.2e-139 498.4 256 100.0
TPR.G24220 Trifolium pratense HOM05D005432 ORTHO05D004599 4.1e-86 322.0 200 82.5
TPR.G24237 Trifolium pratense HOM05D005432 ORTHO05D004599 1.1e-78 297.4 201 77.6
Medtr4g097280 Medicago truncatula HOM05D005432 ORTHO05D004599 6.0e-69 265.0 198 70.2
Medtr4g097350 Medicago truncatula HOM05D005432 ORTHO05D004599 8.3e-63 244.6 200 69.0
Medtr4g097360 Medicago truncatula HOM05D005432 ORTHO05D004599 2.4e-62 243.0 192 66.7
Psat4g081760 Pisum sativum HOM05D005432 ORTHO05D004599 1.1e-54 217.6 200 66.0
Ca_22097_v3 Cicer arietinum L. HOM05D005432 ORTHO05D004599 1.2e-53 214.2 192 62.0
Lj4g0003965 Lotus japonicus HOM05D005432 ORTHO05D004599 4.3e-43 179.1 193 57.0
Psat4g081120 Pisum sativum HOM05D005432 ORTHO05D004599 1.6e-26 124.0 120 64.2
Glyma.05G107500 Glycine max HOM05D005432 ORTHO05D004599 6.2e-26 122.1 198 43.9
Glyma.17G159600 Glycine max HOM05D005432 ORTHO05D004599 1.5e-24 117.5 200 43.0
VMungo0251G2573 Vigna mungo HOM05D005432 ORTHO05D004599 1.9e-22 110.5 196 42.9
Lalb_Chr05g0225821 Lupinus albus HOM05D005432 ORTHO05D004599 1.6e-21 107.5 203 39.9
Phvul.003G233700 Phaseolus vulgaris HOM05D005432 ORTHO05D004599 3.5e-21 106.3 196 40.8
Glyma.01G195300 Glycine max HOM05D005432 ORTHO05D004599 1.6e-18 97.4 179 39.1
Phvul.002G009700 Phaseolus vulgaris HOM05D005432 ORTHO05D004599 1.1e-17 94.7 188 39.9
Duzib264G0647 Durio zibethinus HOM05D005432 ORTHO05D004599 2.4e-17 93.6 188 38.8
Glyma.11G046400 Glycine max HOM05D005432 ORTHO05D004599 3.1e-17 93.2 165 41.8
VMungo1215G3148 Vigna mungo HOM05D005432 ORTHO05D004599 1.0e-15 88.2 183 39.9
QL06p039087 Quercus lobata HOM05D005432 ORTHO05D004599 1.7e-15 87.4 194 40.7
Thecc.01G075000 Theobroma cacao HOM05D005432 ORTHO05D004599 3.2e-14 83.2 191 35.1
Manes.13G109800 Manihot esculenta HOM05D005432 ORTHO05D004599 4.2e-14 82.8 189 37.0
Duzib147G0737 Durio zibethinus HOM05D005432 ORTHO05D004599 9.4e-14 81.6 184 39.1
Duzib187G0823 Durio zibethinus HOM05D005432 ORTHO05D004599 2.7e-13 80.1 189 37.6
Gohir.A12G078000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 7.9e-13 78.6 195 36.9
MD02G1188600 Malus domestica HOM05D005432 ORTHO05D004599 1.0e-12 78.2 197 34.0
Prupe.6G218300 Prunus persica HOM05D005432 ORTHO05D004599 1.0e-12 78.2 201 34.3
Gohir.A11G213000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 2.3e-12 77.0 161 37.9
Gorai.007G225500 Gossypium raimondii HOM05D005432 ORTHO05D004599 2.3e-12 77.0 161 38.5
Gohir.D11G210200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 3.0e-12 76.6 187 38.0
Gohir.D12G076200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 3.9e-12 76.3 195 35.9
Dinv23035 Davidia involucrata HOM05D005432 ORTHO05D004599 8.8e-12 75.1 110 48.2
Gorai.008G084600 Gossypium raimondii HOM05D005432 ORTHO05D004599 4.3e-11 72.8 195 35.4
COL.COLO4_11602 Corchorus olitorius HOM05D005432 ORTHO05D004599 1.3e-10 71.2 147 35.4
MD02G1188700 Malus domestica HOM05D005432 ORTHO05D004599 4.8e-10 69.3 119 44.5
Haze_15264 Corylus avellana HOM05D005432 ORTHO05D004599 6.3e-10 68.9 92 50.0
Potri.014G006400 Populus trichocarpa HOM05D005432 ORTHO05D004599 6.3e-10 68.9 100 48.0
Atru.chr3.1044 Acer truncatum HOM05D005432 ORTHO05D004599 1.4e-09 67.8 94 50.0
Manes.12G116300 Manihot esculenta HOM05D005432 ORTHO05D004599 1.4e-09 67.8 190 36.8
Sabra07G0004500 Salix brachista HOM05D005432 ORTHO05D004599 1.8e-09 67.4 208 34.1
TWI77G0559 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 1.8e-09 67.4 70 51.4
TWI74G0597 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 3.1e-09 66.6 84 48.8
TAR628G1364 Trochodendron aralioides HOM05D005432 ORTHO05D004599 4.1e-09 66.2 82 50.0
FvH4_1g18020 Fragaria vesca HOM05D005432 ORTHO05D004599 6.9e-09 65.5 89 47.2
FAN19G1119 Fragaria x ananassa HOM05D005432 ORTHO05D004599 6.9e-09 65.5 89 47.2
Sopen02g014700 Solanum pennellii HOM05D005432 ORTHO05D004599 6.9e-09 65.5 86 50.0
Actinidia11967 Actinidia chinensis HOM05D005432 ORTHO05D004599 9.1e-09 65.1 123 35.0
CiPaw.01G002700 Carya illinoinensis HOM05D005432 ORTHO05D004599 9.1e-09 65.1 84 51.2
FAN23G2070 Fragaria x ananassa HOM05D005432 ORTHO05D004599 9.1e-09 65.1 89 46.1
Nitab4.5_0008385g0010 Nicotiana tabacum HOM05D005432 ORTHO05D004599 9.1e-09 65.1 93 46.2
Rhsim10G0095000 Rhododendron simsii HOM05D005432 ORTHO05D004599 9.1e-09 65.1 194 35.1
RcHm_v2.0_Chr2g0108511 Rosa chinensis HOM05D005432 ORTHO05D004599 9.1e-09 65.1 89 47.2
Sabra14G0006100 Salix brachista HOM05D005432 ORTHO05D004599 1.2e-08 64.7 169 34.3
PGSC0003DMG400012977 Solanum tuberosum HOM05D005432 ORTHO05D004599 1.2e-08 64.7 89 46.1
CANSAT01G2351 Cannabis sativa HOM05D005432 ORTHO05D004599 1.5e-08 64.3 96 47.9
FAN26G1008 Fragaria x ananassa HOM05D005432 ORTHO05D004599 1.5e-08 64.3 85 44.7
Potri.007G006200 Populus trichocarpa HOM05D005432 ORTHO05D004599 1.5e-08 64.3 196 35.7
Nitab4.5_0000680g0130 Nicotiana tabacum HOM05D005432 ORTHO05D004599 2.0e-08 63.9 87 50.6
Psat2g172120 Pisum sativum HOM05D005432 ORTHO05D004599 2.0e-08 63.9 91 46.2
Lalb_Chr16g0378951 Lupinus albus HOM05D005432 ORTHO05D004599 2.6e-08 63.5 101 47.5
Medtr5g015190 Medicago truncatula HOM05D005432 ORTHO05D004599 2.6e-08 63.5 118 39.8
TPR.G9336 Trifolium pratense HOM05D005432 ORTHO05D004599 2.6e-08 63.5 97 43.3
Solyc09g008750.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 4.5e-08 62.8 82 46.3
FAN28G2020 Fragaria x ananassa HOM05D005432 ORTHO05D004599 5.9e-08 62.4 77 50.6
Peaxi162Scf00500g00034 Petunia axillaris HOM05D005432 ORTHO05D004599 5.9e-08 62.4 94 45.7
TAR625G0570 Trochodendron aralioides HOM05D005432 ORTHO05D004599 7.7e-08 62.0 49 59.2
Nitab4.5_0008385g0020 Nicotiana tabacum HOM05D005432 ORTHO05D004599 1.0e-07 61.6 87 47.1
SalBow5G2133 Salvia bowleyana HOM05D005432 ORTHO05D004599 1.0e-07 61.6 94 44.7
Solyc02g064570.2 Solanum lycopersicum HOM05D005432 ORTHO05D004599 1.0e-07 61.6 142 38.0
Peaxi162Scf00449g00414 Petunia axillaris HOM05D005432 ORTHO05D004599 1.3e-07 61.2 90 51.1
Prupe.6G218200 Prunus persica HOM05D005432 ORTHO05D004599 1.3e-07 61.2 203 31.0
CiPaw.02G001400 Carya illinoinensis HOM05D005432 ORTHO05D004599 1.7e-07 60.8 90 48.9
Cfa004151 Carpinus fangiana HOM05D005432 ORTHO05D004599 2.9e-07 60.1 86 46.5
Rhsim10G0095100 Rhododendron simsii HOM05D005432 ORTHO05D004599 2.9e-07 60.1 52 63.5
PGSC0003DMG400003320 Solanum tuberosum HOM05D005432 ORTHO05D004599 2.9e-07 60.1 122 39.3
DCAR_010807 Daucus carota HOM05D005432 ORTHO05D004599 5.0e-07 59.3 84 44.0
Gohir.A11G048800 Gossypium hirsutum HOM05D005432 ORTHO05D004599 5.0e-07 59.3 90 44.4
PGSC0003DMG400002732 Solanum tuberosum HOM05D005432 ORTHO05D004599 5.0e-07 59.3 52 53.8
CAN.G775.5 Capsicum annuum HOM05D005432 ORTHO05D004599 6.5e-07 58.9 125 38.4
Eucgr.H02318 Eucalyptus grandis HOM05D005432 ORTHO05D004599 1.1e-06 58.2 91 46.2
TAR381G0486 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.1e-06 58.2 78 51.3
Rhsim08G0092400 Rhododendron simsii HOM05D005432 ORTHO05D004599 1.9e-06 57.4 119 37.0
Eucgr.H02317 Eucalyptus grandis HOM05D005432 ORTHO05D004599 2.5e-06 57.0 134 34.3
Lsat_1_v5_gn_4_160241 Lactuca sativa HOM05D005432 ORTHO05D004599 2.5e-06 57.0 52 61.5
Solyc09g008760.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 2.5e-06 57.0 90 42.2
Gohir.D11G052400 Gossypium hirsutum HOM05D005432 ORTHO05D004599 4.2e-06 56.2 98 40.8
Gorai.007G056800 Gossypium raimondii HOM05D005432 ORTHO05D004599 4.2e-06 56.2 98 40.8
arahy.Tifrunner.gnm1.ann1.0M6NCC Arachis hypogaea HOM05D005432 ORTHO05D004599 5.5e-06 55.8 59 54.2
ClCG01G017720 Citrullus lanatus HOM05D005432 ORTHO05D004599 5.5e-06 55.8 57 54.4
Hma1.2p1_0424F.1_g150570 Hydrangea macrophylla HOM05D005432 ORTHO05D004599 5.5e-06 55.8 88 48.9
Lsat_1_v5_gn_4_160361 Lactuca sativa HOM05D005432 ORTHO05D004599 5.5e-06 55.8 65 46.2
CAN.G1830.3 Capsicum annuum HOM05D005432 ORTHO05D004599 7.2e-06 55.5 35 68.6
Nn5g30641 Nelumbo nucifera HOM05D005432 ORTHO05D004599 7.2e-06 55.5 81 43.2
Ciclev10026545m.g Citrus clementina HOM05D005432 ORTHO05D004599 9.4e-06 55.1 97 45.4
ECA232G0649 Erigeron canadensis HOM05D005432 ORTHO05D004599 9.4e-06 55.1 85 47.1


User provided reference genes

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