Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24215 Trifolium pratense HOM05D011238 ORTHO05D004093 4.7e-164 581.3 318 100.0
TPR.G31069 Trifolium pratense HOM05D011238 ORTHO05D004093 5.9e-26 122.5 121 46.3
TPR.G19381 Trifolium pratense HOM05D000003 ORTHO05D000004 3.3e-24 116.7 118 44.1
TPR.G14786 Trifolium pratense HOM05D000071 ORTHO05D000029 2.8e-23 113.6 125 42.4
TPR.G31700 Trifolium pratense HOM05D000003 ORTHO05D000004 4.7e-15 86.3 93 36.6
Medtr4g009790 Medicago truncatula HOM05D011238 ORTHO05D016329 5.4e-11 72.8 89 32.6
Psat6g200320 Pisum sativum HOM05D011238 ORTHO05D004093 4.6e-10 69.7 113 31.9
TPR.G22171 Trifolium pratense HOM05D000147 ORTHO05D004093 6.6e-09 65.9 120 29.2
TPR.G5236 Trifolium pratense HOM05D000003 ORTHO05D004093 1.9e-08 64.3 83 28.9
TPR.G16652 Trifolium pratense HOM05D011174 ORTHO05D004093 5.6e-08 62.8 115 25.2
Medtr4g098780 Medicago truncatula HOM05D011238 ORTHO05D004093 7.3e-08 62.4 68 38.2
Psat5g030960 Pisum sativum HOM05D011238 ORTHO05D004093 7.3e-08 62.4 101 30.7
TPR.G3250 Trifolium pratense HOM05D011238 ORTHO05D004093 7.3e-08 62.4 73 41.1
TPR.G5340 Trifolium pratense HOM05D011238 ORTHO05D004093 9.5e-08 62.0 47 51.1
TPR.G16927 Trifolium pratense HOM05D011238 ORTHO05D004093 1.2e-07 61.6 48 45.8
Medtr1g046130 Medicago truncatula HOM05D000003 ORTHO05D000004 3.6e-07 60.1 57 42.1
Psat5g032200 Pisum sativum HOM05D011238 ORTHO05D004093 6.2e-07 59.3 123 30.9
Lj8P177T18 Lonicera japonica HOM05D014440 ORTHO05D000167 1.1e-06 58.5 102 24.5
TPR.G16970 Trifolium pratense HOM05D011238 ORTHO05D004093 1.4e-06 58.2 84 35.7
Lj5C785T7 Lonicera japonica HOM05D008418 ORTHO05D000004 2.3e-06 57.4 100 29.0
Medtr6g453270 Medicago truncatula HOM05D000147 ORTHO05D004093 5.2e-06 56.2 104 27.9
CANSAT11G1435 Cannabis sativa HOM05D000003 ORTHO05D000167 6.8e-06 55.8 108 29.6


User provided reference genes

Program Settings