Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24140 Trifolium pratense HOM05D005677 ORTHO05D006966 1.9e-90 335.9 180 100.0
Ca_22266_v3 Cicer arietinum L. HOM05D005677 ORTHO05D006966 2.0e-58 229.6 255 53.3
Ca_22280_v3 Cicer arietinum L. HOM05D005677 ORTHO05D006966 2.0e-58 229.6 255 53.3
Medtr8g077610 Medicago truncatula HOM05D005677 ORTHO05D006966 2.5e-53 212.6 233 53.2
Psat4g092640 Pisum sativum HOM05D005677 ORTHO05D006966 6.1e-52 208.0 259 51.4
Psat4g079800 Pisum sativum HOM05D005677 ORTHO05D006966 1.8e-51 206.5 255 51.0
LjContig00448g0024692 Lotus japonicus HOM05D005677 ORTHO05D006966 9.7e-50 200.7 261 48.3
Phvul.003G253400 Phaseolus vulgaris HOM05D005677 ORTHO05D006966 3.0e-43 179.1 265 44.5
arahy.Tifrunner.gnm1.ann1.6977IM Arachis hypogaea HOM05D005677 ORTHO05D006966 6.7e-43 177.9 268 41.4
VMungo0251G0356 Vigna mungo HOM05D005677 ORTHO05D006966 1.7e-41 173.3 263 42.2
arahy.Tifrunner.gnm1.ann1.V4VRBH Arachis hypogaea HOM05D005677 ORTHO05D006966 2.8e-41 172.6 270 40.7
Hma1.2p1_0224F.1_g094650 Hydrangea macrophylla HOM05D005677 ORTHO05D006966 3.7e-41 172.2 262 40.5
Lalb_Chr16g0388501 Lupinus albus HOM05D005677 ORTHO05D006966 3.7e-41 172.2 269 40.5
Glyma.02G057000 Glycine max HOM05D005677 ORTHO05D006966 1.4e-40 170.2 261 44.1
Haze_15089 Corylus avellana HOM05D005677 ORTHO05D006966 2.4e-40 169.5 264 40.9
Cfa004307 Carpinus fangiana HOM05D005677 ORTHO05D006966 4.5e-39 165.2 265 40.0
CiPaw.01G038100 Carya illinoinensis HOM05D005677 ORTHO05D006966 1.1e-37 160.6 261 38.7
QL06p046093 Quercus lobata HOM05D005677 ORTHO05D006966 6.1e-36 154.8 263 38.4
COL.COLO4_22080 Corchorus olitorius HOM05D005677 ORTHO05D006966 8.0e-36 154.5 266 37.2
CSS0028163 Camellia sinensis var. sinensis HOM05D005677 ORTHO05D006966 6.8e-35 151.4 224 39.7
Thecc.01G035800 Theobroma cacao HOM05D005677 ORTHO05D006966 6.8e-35 151.4 265 36.2
RcHm_v2.0_Chr2g0101571 Rosa chinensis HOM05D005677 ORTHO05D006966 1.5e-34 150.2 261 37.5
Cpa.g.sc6.112 Carica papaya HOM05D005677 ORTHO05D006966 2.6e-34 149.4 274 35.4
Aa31LG1G15100 Aethionema arabicum HOM05D005677 ORTHO05D006966 3.4e-34 149.1 230 39.1
THA.LOC104821296 Tarenaya hassleriana HOM05D005677 ORTHO05D006966 3.4e-34 149.1 249 36.9
Prupe.7G154600 Prunus persica HOM05D005677 ORTHO05D006966 4.4e-34 148.7 223 40.8
Actinidia19186 Actinidia chinensis HOM05D005677 ORTHO05D006966 1.3e-33 147.1 261 36.4
Gorai.003G015000 Gossypium raimondii HOM05D005677 ORTHO05D006966 1.3e-33 147.1 254 36.6
Cc06_g21220 Coffea canephora HOM05D005677 ORTHO05D006966 1.7e-33 146.7 271 38.0
Duzib147G0715 Durio zibethinus HOM05D005677 ORTHO05D006966 1.7e-33 146.7 265 34.7
ClCG01G019540 Citrullus lanatus HOM05D005677 ORTHO05D006966 2.2e-33 146.4 265 35.1
Gohir.A02G165300 Gossypium hirsutum HOM05D005677 ORTHO05D006966 2.2e-33 146.4 228 37.7
Gohir.D03G014700 Gossypium hirsutum HOM05D005677 ORTHO05D006966 2.8e-33 146.0 254 36.2
Migut.H00989 Erythranthe guttata HOM05D005677 ORTHO05D006966 6.3e-33 144.8 238 39.5
FvH4_1g13310 Fragaria vesca HOM05D005677 ORTHO05D006966 1.4e-32 143.7 263 36.5
FAN19G0062 Fragaria x ananassa HOM05D005677 ORTHO05D006966 1.8e-32 143.3 263 35.7
TWI53G0229 Tripterygium wilfordii HOM05D005677 ORTHO05D006966 1.8e-32 143.3 265 36.2
FAN26G2780 Fragaria x ananassa HOM05D005677 ORTHO05D006966 3.1e-32 142.5 263 35.7
FAN28G0162 Fragaria x ananassa HOM05D005677 ORTHO05D006966 3.1e-32 142.5 259 36.7
Migut.L00520 Erythranthe guttata HOM05D005677 ORTHO05D006966 4.1e-32 142.1 236 39.0
Potri.007G025600 Populus trichocarpa HOM05D005677 ORTHO05D006966 4.1e-32 142.1 266 34.6
AUR62007566 Chenopodium quinoa HOM05D005677 ORTHO05D006966 5.4e-32 141.7 255 36.5
Aa31LG4G18970 Aethionema arabicum HOM05D005677 ORTHO05D006966 9.1e-32 141.0 227 39.2
CANSAT01G0942 Cannabis sativa HOM05D005677 ORTHO05D006966 1.2e-31 140.6 267 35.6
CsaV3_6G046230 Cucumis sativus L. HOM05D005677 ORTHO05D006966 1.6e-31 140.2 227 38.8
A01p21690 Brassica napus HOM05D005677 ORTHO05D006966 2.7e-31 139.4 231 37.2
BolC8t50224H Brassica oleracea HOM05D005677 ORTHO05D006966 2.7e-31 139.4 228 40.4
BraA01t02078Z Brassica rapa HOM05D005677 ORTHO05D006966 2.7e-31 139.4 231 37.2
AUR62004051 Chenopodium quinoa HOM05D005677 ORTHO05D006966 2.7e-31 139.4 256 35.9
Lsat_1_v5_gn_4_152101 Lactuca sativa HOM05D005677 ORTHO05D006966 2.7e-31 139.4 260 36.9
Sed0020674 Sechium edule HOM05D005677 ORTHO05D006966 3.5e-31 139.0 229 38.0
Carub.0005s1724 Capsella rubella HOM05D005677 ORTHO05D006966 4.5e-31 138.7 224 39.7
CARHR160400 Cardamine hirsuta HOM05D005677 ORTHO05D006966 4.5e-31 138.7 219 39.7
MD15G1261800 Malus domestica HOM05D005677 ORTHO05D006966 4.5e-31 138.7 224 38.8
THA.LOC104821292 Tarenaya hassleriana HOM05D005677 ORTHO05D006966 4.5e-31 138.7 266 34.2
THA.LOC109115976 Tarenaya hassleriana HOM05D005677 ORTHO05D006966 4.5e-31 138.7 266 34.2
AT3G50850 Arabidopsis thaliana HOM05D005677 ORTHO05D006966 5.9e-31 138.3 225 38.2
MELO3C007826.2 Cucumis melo HOM05D005677 ORTHO05D006966 7.7e-31 137.9 227 37.9
Manes.01G135600 Manihot esculenta HOM05D005677 ORTHO05D006966 7.7e-31 137.9 267 34.8
Sabra07G0022600 Salix brachista HOM05D005677 ORTHO05D006966 1.0e-30 137.5 270 34.4
Oeu042263.1 Olea europaea HOM05D005677 ORTHO05D006966 1.3e-30 137.1 258 36.4
vmacro17831 Vaccinium macrocarpon HOM05D005677 ORTHO05D006966 1.7e-30 136.7 231 38.1
Atru.chr3.573 Acer truncatum HOM05D005677 ORTHO05D006966 2.9e-30 136.0 269 33.5
Sp7g14210 Schrenkiella parvula HOM05D005677 ORTHO05D006966 2.9e-30 136.0 226 36.7
AL8G23360 Arabidopsis lyrata HOM05D005677 ORTHO05D006966 3.8e-30 135.6 220 37.3
CARHR281190 Cardamine hirsuta HOM05D005677 ORTHO05D006966 3.8e-30 135.6 224 37.1
AT5G49560 Arabidopsis thaliana HOM05D005677 ORTHO05D006966 5.0e-30 135.2 257 35.0
BcaC09g50280 Brassica carinata HOM05D005677 ORTHO05D006966 8.6e-30 134.4 228 36.4
C01p27040 Brassica napus HOM05D005677 ORTHO05D006966 8.6e-30 134.4 228 36.4
BolC1t02652H Brassica oleracea HOM05D005677 ORTHO05D006966 8.6e-30 134.4 228 36.4
Carub.0008s2796 Capsella rubella HOM05D005677 ORTHO05D006966 8.6e-30 134.4 223 37.2
Nn2g12315 Nelumbo nucifera HOM05D005677 ORTHO05D006966 8.6e-30 134.4 262 35.1
EL10Ac6g15562 Beta vulgaris HOM05D005677 ORTHO05D006966 1.5e-29 133.7 255 34.1
Solyc02g085210.1 Solanum lycopersicum HOM05D005677 ORTHO05D006966 1.5e-29 133.7 258 34.9
Sopen02g029910 Solanum pennellii HOM05D005677 ORTHO05D006966 1.5e-29 133.7 258 35.7
BcaB01g00573 Brassica carinata HOM05D005677 ORTHO05D006966 1.9e-29 133.3 229 38.4
HanXRQChr09g0261461 Helianthus annuus HOM05D005677 ORTHO05D006966 1.9e-29 133.3 259 34.4
C08p26060 Brassica napus HOM05D005677 ORTHO05D006966 2.5e-29 132.9 225 39.1
Nitab4.5_0001385g0030 Nicotiana tabacum HOM05D005677 ORTHO05D006966 2.5e-29 132.9 261 34.1
Thhalv10027491m.g Eutrema salsugineum HOM05D005677 ORTHO05D006966 3.2e-29 132.5 233 35.6
Lj2P453T29 Lonicera japonica HOM05D005677 ORTHO05D006966 3.2e-29 132.5 217 38.2
Oeu041446.1 Olea europaea HOM05D005677 ORTHO05D006966 3.2e-29 132.5 236 38.6
Rhsim08G0117300 Rhododendron simsii HOM05D000412 ORTHO05D002774 3.2e-29 132.5 223 39.5
PGSC0003DMG400003597 Solanum tuberosum HOM05D005677 ORTHO05D006966 4.2e-29 132.1 262 34.7
DCAR_025564 Daucus carota HOM05D005677 ORTHO05D006966 7.2e-29 131.3 263 35.0
CAN.G358.85 Capsicum annuum HOM05D005677 ORTHO05D006966 9.5e-29 131.0 264 34.8
Gohir.D11G190800 Gossypium hirsutum HOM05D005677 ORTHO05D006966 2.1e-28 129.8 224 37.1
Nitab4.5_0000178g0070 Nicotiana tabacum HOM05D005677 ORTHO05D006966 2.8e-28 129.4 257 33.9
Eucgr.H01270 Eucalyptus grandis HOM05D005677 ORTHO05D006966 4.7e-28 128.6 230 33.9
Eucgr.L02813 Eucalyptus grandis HOM05D005677 ORTHO05D006966 4.7e-28 128.6 230 34.3
Thhalv10010630m.g Eutrema salsugineum HOM05D005677 ORTHO05D006966 8.0e-28 127.9 230 37.0
DCAR_025942 Daucus carota HOM05D005677 ORTHO05D006966 1.0e-27 127.5 268 35.1
Peaxi162Scf00366g10014 Petunia axillaris HOM05D005677 ORTHO05D006966 2.3e-27 126.3 255 33.3
Ciclev10026228m.g Citrus clementina HOM05D005677 ORTHO05D006966 3.0e-27 125.9 269 31.6
Ah.03g140850 Amaranthus hybridus HOM05D005677 ORTHO05D006966 9.8e-26 120.9 230 37.0
ECA232G2278 Erigeron canadensis HOM05D005677 ORTHO05D006966 6.3e-25 118.2 223 35.4
PSO210G3110 Papaver somniferum HOM05D005677 ORTHO05D006966 6.3e-25 118.2 225 32.9
PSO731G0124 Papaver somniferum HOM05D005677 ORTHO05D006966 1.1e-24 117.5 225 32.9
Gohir.A11G184300 Gossypium hirsutum HOM05D005677 ORTHO05D006966 9.2e-24 114.4 210 35.2
PGR102G2535 Punica granatum HOM05D005677 ORTHO05D006966 9.2e-24 114.4 255 33.3
Dinv39987 Davidia involucrata HOM05D005677 ORTHO05D006966 1.6e-23 113.6 139 51.1
SalBow5G4467 Salvia bowleyana HOM05D005677 ORTHO05D006966 1.3e-22 110.5 222 33.3
TAR625G0490 Trochodendron aralioides HOM05D005677 ORTHO05D006966 5.0e-22 108.6 216 34.3
Oeu033645.1 Olea europaea HOM05D005677 ORTHO05D006966 2.3e-19 99.8 152 42.1
HPP92_019510 Vanilla planifolia HOM05D005677 ORTHO05D006966 3.0e-19 99.4 218 31.7
FAN23G0294 Fragaria x ananassa HOM05D005677 ORTHO05D006966 2.6e-18 96.3 84 60.7
unitig_32.g11368 Utricularia gibba HOM05D005677 ORTHO05D006966 3.4e-18 95.9 84 58.3
Gorai.007G203300 Gossypium raimondii HOM05D005677 ORTHO05D006966 7.5e-18 94.7 90 57.8
Sc16g0002730 Simmondsia chinensis HOM05D003467 ORTHO05D004220 4.9e-17 92.0 193 34.2
ATR0772G168 Amborella trichopoda HOM05D005677 ORTHO05D006966 1.8e-16 90.1 228 30.3
BraA09t39853Z Brassica rapa HOM05D005677 ORTHO05D006966 1.2e-15 87.4 224 32.1
BcaC07g39550 Brassica carinata HOM05D005677 ORTHO05D006966 2.0e-15 86.7 187 34.2
BcaC09g50274 Brassica carinata HOM05D005677 ORTHO05D006966 5.9e-15 85.1 62 58.1
CDE02G2571 Ceratophyllum demersum HOM05D005677 ORTHO05D006966 7.8e-15 84.7 125 41.6
Oeu009414.1 Olea europaea HOM05D005677 ORTHO05D006966 1.3e-14 84.0 51 72.5
arahy.Tifrunner.gnm1.ann1.QCSB5K Arachis hypogaea HOM05D001229 ORTHO05D011199 2.3e-14 83.2 52 69.2
MBI03_g28536_MAGBIO Magnolia biondii HOM05D005677 ORTHO05D006966 1.1e-13 80.9 75 56.0
Os07g0569500 Oryza sativa ssp. japonica HOM05D005677 ORTHO05D006966 1.5e-13 80.5 239 28.0
Zm00001eb324730 Zea mays HOM05D005677 ORTHO05D006966 4.3e-13 79.0 226 27.9
MD02G1147500 Malus domestica HOM05D005677 ORTHO05D006966 8.9e-11 71.2 46 69.6
BcaNung00242 Brassica carinata HOM05D005677 ORTHO05D006966 1.7e-09 67.0 49 61.2
SEGI_16522 Sequoiadendron giganteum HOM05D005677 ORTHO05D006966 1.1e-08 64.3 258 23.6
AagrBONN_evm.TU.Sc2ySwM_368.1727 Anthoceros agrestis HOM05D005677 ORTHO05D006966 4.6e-07 58.9 61 39.3
DCAR_025565 Daucus carota HOM05D005677 ORTHO05D006966 3.9e-06 55.8 125 36.8


User provided reference genes

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