Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2405 Trifolium pratense HOM05D004708 ORTHO05D005573 1.1e-93 346.7 178 100.0
Medtr5g020680 Medicago truncatula HOM05D004708 ORTHO05D005573 4.9e-86 321.2 175 92.6
Psat2g158360 Pisum sativum HOM05D004708 ORTHO05D005573 3.2e-85 318.5 177 91.0
Ca_24863_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 6.6e-83 310.8 174 91.4
Ca_21297_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 2.8e-81 305.4 175 89.7
Lj2g0001027 Lotus japonicus HOM05D002605 ORTHO05D002842 6.2e-81 304.3 178 87.6
arahy.Tifrunner.gnm1.ann1.CZ32YF Arachis hypogaea HOM05D004708 ORTHO05D005573 1.1e-80 303.5 178 86.5
Medtr8g073890 Medicago truncatula HOM05D004708 ORTHO05D005573 1.7e-78 296.2 168 90.5
arahy.Tifrunner.gnm1.ann1.Y7U3HW Arachis hypogaea HOM05D004708 ORTHO05D005573 1.4e-77 293.1 178 83.7
arahy.Tifrunner.gnm1.ann1.V6C6W3 Arachis hypogaea HOM05D004708 ORTHO05D005573 1.9e-77 292.7 178 84.3
arahy.Tifrunner.gnm1.ann1.KFYL3R Arachis hypogaea HOM05D004708 ORTHO05D005573 7.1e-77 290.8 178 84.3
Glyma.01G173050 Glycine max HOM05D004708 ORTHO05D005573 1.2e-76 290.0 182 83.0
VMungo1215G3002 Vigna mungo HOM05D004708 ORTHO05D005573 1.4e-72 276.6 182 79.1
Phvul.002G032200 Phaseolus vulgaris HOM05D004708 ORTHO05D005573 2.3e-72 275.8 185 79.5
Lalb_Chr05g0212721 Lupinus albus HOM05D004708 ORTHO05D005573 6.8e-72 274.2 171 83.0
COL.COLO4_34048 Corchorus olitorius HOM05D004708 ORTHO05D005573 3.1e-64 248.8 173 70.5
Thecc.01G032800 Theobroma cacao HOM05D004708 ORTHO05D005573 1.5e-63 246.5 167 72.5
QL06p046600 Quercus lobata HOM05D004708 ORTHO05D005573 2.6e-63 245.7 166 73.5
Ciclev10026600m.g Citrus clementina HOM05D004708 ORTHO05D005573 4.4e-63 245.0 171 71.9
Thecc.03G010200 Theobroma cacao HOM05D004708 ORTHO05D005573 1.3e-62 243.4 173 68.8
CiPaw.01G043700 Carya illinoinensis HOM05D004708 ORTHO05D005573 1.7e-62 243.0 171 70.2
Gorai.008G067200 Gossypium raimondii HOM05D004708 ORTHO05D005573 1.7e-62 243.0 166 72.9
Glyma.02G276900 Glycine max HOM05D004708 ORTHO05D005573 2.9e-62 242.3 146 82.9
Aa31LG8G15760 Aethionema arabicum HOM05D004708 ORTHO05D005573 3.8e-62 241.9 164 73.8
Duzib084G0089 Durio zibethinus HOM05D004708 ORTHO05D005573 3.8e-62 241.9 171 69.6
Actinidia19193 Actinidia chinensis HOM05D004708 ORTHO05D005573 2.4e-61 239.2 170 69.4
Cpa.g.sc6.137 Carica papaya HOM05D004708 ORTHO05D005573 4.2e-61 238.4 170 71.2
vmacro17822 Vaccinium macrocarpon HOM05D004708 ORTHO05D005573 4.2e-61 238.4 170 69.4
MD02G1144700 Malus domestica HOM05D004708 ORTHO05D005573 5.4e-61 238.0 171 70.8
Carub.0003s3243 Capsella rubella HOM05D004708 ORTHO05D005573 1.2e-60 236.9 164 70.7
Prupe.7G156900 Prunus persica HOM05D004708 ORTHO05D005573 1.2e-60 236.9 174 69.5
Rhsim08G0118600 Rhododendron simsii HOM05D004708 ORTHO05D005573 2.1e-60 236.1 170 69.4
TWI53G1618 Tripterygium wilfordii HOM05D004708 ORTHO05D005573 2.1e-60 236.1 169 69.2
AT2G18250 Arabidopsis thaliana HOM05D004708 ORTHO05D005573 2.7e-60 235.7 159 72.3
CSS0030971 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 2.7e-60 235.7 170 68.8
AL3G51520 Arabidopsis lyrata HOM05D004708 ORTHO05D005573 3.5e-60 235.3 171 69.6
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 3.5e-60 235.3 168 69.0
Nitab4.5_0000136g0310 Nicotiana tabacum HOM05D004708 ORTHO05D005573 1.0e-59 233.8 167 70.1
Gohir.A09G170800 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.3e-59 233.4 169 66.3
Thhalv10022875m.g Eutrema salsugineum HOM05D004708 ORTHO05D005573 1.7e-59 233.0 159 71.7
MD15G1258400 Malus domestica HOM05D004708 ORTHO05D005573 1.7e-59 233.0 171 69.6
ECA232G2192 Erigeron canadensis HOM05D004708 ORTHO05D005573 2.3e-59 232.6 175 69.1
FvH4_1g13011 Fragaria vesca HOM05D004708 ORTHO05D005573 3.0e-59 232.3 172 68.6
Lsat_1_v5_gn_4_148240 Lactuca sativa HOM05D004708 ORTHO05D005573 3.0e-59 232.3 164 68.9
Gorai.006G188300 Gossypium raimondii HOM05D004708 ORTHO05D005573 3.9e-59 231.9 169 65.1
Potri.005G121200 Populus trichocarpa HOM05D004708 ORTHO05D005573 3.9e-59 231.9 174 69.0
Sc16g0002660 Simmondsia chinensis HOM05D004708 ORTHO05D005573 3.9e-59 231.9 161 71.4
Sopen02g013670 Solanum pennellii HOM05D004708 ORTHO05D005573 5.1e-59 231.5 178 65.7
CARHR108820 Cardamine hirsuta HOM05D004708 ORTHO05D005573 6.6e-59 231.1 171 69.0
RcHm_v2.0_Chr2g0101171 Rosa chinensis HOM05D004708 ORTHO05D005573 6.6e-59 231.1 176 65.3
Solyc02g062640.4 Solanum lycopersicum HOM05D004708 ORTHO05D005573 6.6e-59 231.1 167 68.9
Hund16439 Selenicereus undatus HOM05D004708 ORTHO05D005573 8.7e-59 230.7 160 70.6
Atru.chr3.607 Acer truncatum HOM05D004708 ORTHO05D005573 1.1e-58 230.3 167 68.9
Manes.01G136850 Manihot esculenta HOM05D004708 ORTHO05D005573 1.1e-58 230.3 166 68.7
Peaxi162Scf00008g03516 Petunia axillaris HOM05D004708 ORTHO05D005573 1.1e-58 230.3 155 73.5
COL.COLO4_22050 Corchorus olitorius HOM05D004708 ORTHO05D005573 1.5e-58 229.9 175 69.1
CAN.G111.48 Capsicum annuum HOM05D004708 ORTHO05D005573 2.5e-58 229.2 155 72.9
Duzib264G1087 Durio zibethinus HOM05D004708 ORTHO05D005573 2.5e-58 229.2 168 68.5
Cc07_g09720 Coffea canephora HOM05D004708 ORTHO05D005573 3.3e-58 228.8 170 67.1
MELO3C006648.2 Cucumis melo HOM05D004708 ORTHO05D005573 3.3e-58 228.8 168 67.3
HanXRQChr09g0261341 Helianthus annuus HOM05D004708 ORTHO05D005573 3.3e-58 228.8 158 72.2
GSVIVG01018936001 Vitis vinifera HOM05D004708 ORTHO05D005573 5.6e-58 228.0 168 69.6
CsaV3_3G014460 Cucumis sativus L. HOM05D004708 ORTHO05D005573 7.3e-58 227.6 169 68.0
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 7.3e-58 227.6 166 68.1
Sp3g31670 Schrenkiella parvula HOM05D004708 ORTHO05D005573 9.6e-58 227.3 171 68.4
AUR62004070 Chenopodium quinoa HOM05D004708 ORTHO05D005573 1.3e-57 226.9 164 69.5
PGR119G0658 Punica granatum HOM05D004708 ORTHO05D005573 2.1e-57 226.1 174 67.8
Manes.02G095600 Manihot esculenta HOM05D004708 ORTHO05D005573 2.8e-57 225.7 171 67.3
THA.LOC104807464 Tarenaya hassleriana HOM05D004708 ORTHO05D005573 4.8e-57 224.9 198 60.1
PGSC0003DMG400015508 Solanum tuberosum HOM05D004708 ORTHO05D005573 6.2e-57 224.6 166 66.9
PSO764G0091 Papaver somniferum HOM05D004708 ORTHO05D005573 8.1e-57 224.2 172 65.1
CSS0040556 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 1.4e-56 223.4 170 65.3
BcaB07g31677 Brassica carinata HOM05D004708 ORTHO05D005573 6.9e-56 221.1 172 64.5
A07p02450 Brassica napus HOM05D004708 ORTHO05D005573 9.0e-56 220.7 160 68.1
BraA07t28041Z Brassica rapa HOM05D004708 ORTHO05D005573 9.0e-56 220.7 160 68.1
EL10Ac6g15543 Beta vulgaris HOM05D004708 ORTHO05D005573 1.5e-55 219.9 165 67.3
Dinv13509 Davidia involucrata HOM05D004708 ORTHO05D005573 1.5e-55 219.9 165 67.9
BcaC06g36391 Brassica carinata HOM05D004708 ORTHO05D005573 2.6e-55 219.2 172 65.7
AUR62007583 Chenopodium quinoa HOM05D004708 ORTHO05D005573 2.6e-55 219.2 156 70.5
BcaB03g16615 Brassica carinata HOM05D004708 ORTHO05D005573 3.4e-55 218.8 170 67.1
Aqoxy5G01592 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 9.9e-55 217.2 157 68.8
CAN.G1645.15 Capsicum annuum HOM05D004708 ORTHO05D005573 9.9e-55 217.2 155 71.0
MD15G1258500 Malus domestica HOM05D004708 ORTHO05D005573 1.3e-54 216.9 171 65.5
BcaC04g22917 Brassica carinata HOM05D004708 ORTHO05D005573 1.7e-54 216.5 160 66.2
Hund13990 Selenicereus undatus HOM05D004708 ORTHO05D005573 2.2e-54 216.1 166 65.7
BolC7t40861H Brassica oleracea HOM05D004708 ORTHO05D005573 2.9e-54 215.7 172 65.1
DCAR_023857 Daucus carota HOM05D004708 ORTHO05D005573 2.9e-54 215.7 158 65.8
C07p04600 Brassica napus HOM05D004708 ORTHO05D005573 3.8e-54 215.3 172 65.1
BolC9t54282H Brassica oleracea HOM05D004708 ORTHO05D005573 3.8e-54 215.3 160 65.6
MSTRG.23511 Avicennia marina HOM05D004708 ORTHO05D005573 4.9e-54 214.9 159 67.3
PSO339G0290 Papaver somniferum HOM05D004708 ORTHO05D005573 4.9e-54 214.9 159 67.9
DCAR_032374 Daucus carota HOM05D004708 ORTHO05D005573 6.4e-54 214.5 156 66.0
Aqoxy3G01739 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 8.4e-54 214.2 158 67.1
Zm00001eb231510 Zea mays HOM05D004708 ORTHO05D005573 8.4e-54 214.2 157 66.2
SalBow6G2211 Salvia bowleyana HOM05D004708 ORTHO05D005573 2.4e-53 212.6 170 64.1
Lsat_1_v5_gn_2_77221 Lactuca sativa HOM05D004708 ORTHO05D005573 5.4e-53 211.5 162 65.4
Hma1.2p1_0224F.1_g094553 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 9.3e-53 210.7 170 63.5
Migut.H00962 Erythranthe guttata HOM05D004708 ORTHO05D005573 1.6e-52 209.9 172 63.4
FAN25G0668 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.3e-51 206.8 167 64.1
FAN19G0555 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.8e-51 206.5 205 57.1
Sabra05G0099900 Salix brachista HOM05D004708 ORTHO05D005573 1.8e-51 206.5 219 54.8
SGA_v2.0_scaffold258G45779 Striga asiatica HOM05D004708 ORTHO05D005573 3.0e-51 205.7 164 64.0
Os07g0179400 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 3.9e-51 205.3 158 67.1
unitig_21.g20250 Utricularia gibba HOM05D004708 ORTHO05D005573 5.1e-51 204.9 171 60.2
Gohir.A12G064100 Gossypium hirsutum HOM05D004708 ORTHO05D005573 6.7e-51 204.5 166 65.1
ATR0796G251 Amborella trichopoda HOM05D004708 ORTHO05D005573 2.5e-50 202.6 165 61.8
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 3.3e-50 202.2 162 63.0
Hma1.2p1_0789F.1_g218250 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 7.4e-50 201.1 170 61.2
ECA238G4849 Erigeron canadensis HOM05D004708 ORTHO05D005573 2.1e-49 199.5 158 63.9
HPP92_014750 Vanilla planifolia HOM05D004708 ORTHO05D005573 2.8e-49 199.1 146 66.4
SEGI_37374 Sequoiadendron giganteum HOM05D004708 ORTHO05D005573 3.7e-49 198.7 160 63.1
CDE12G0116 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 4.8e-49 198.4 154 64.9
Pp3c18_16890 Physcomitrium patens HOM05D004708 ORTHO05D005573 5.3e-48 194.9 162 57.4
TAR624G0473 Trochodendron aralioides HOM05D004708 ORTHO05D005573 9.0e-48 194.1 154 63.0
CDE01G0816 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 1.5e-47 193.4 176 59.1
Gohir.D09G166500 Gossypium hirsutum HOM05D004708 ORTHO05D005573 3.4e-47 192.2 171 57.9
SMO357G0013 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 3.8e-46 188.7 148 64.9
SMO318G0001 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 1.1e-45 187.2 164 59.8
A09p11790 Brassica napus HOM05D004708 ORTHO05D005573 2.5e-42 176.0 131 65.6
CARHR108850 Cardamine hirsuta HOM05D004708 ORTHO05D005573 5.6e-42 174.9 120 70.8
Dinv39998 Davidia involucrata HOM05D004708 ORTHO05D005573 5.6e-42 174.9 167 56.3
Hma1.2p1_1820F.1_g304110 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 5.6e-42 174.9 138 65.2
FvH4_3g26020 Fragaria vesca HOM05D004708 ORTHO05D005573 1.6e-41 173.3 138 61.6
BcaC04g22919 Brassica carinata HOM05D004708 ORTHO05D005573 9.0e-40 167.5 188 50.5
Mapoly0065s0018 Marchantia polymorpha HOM05D004708 ORTHO05D005573 9.0e-40 167.5 159 56.0
Gohir.D12G064000 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.0e-38 164.1 108 72.2
C09p13900 Brassica napus HOM05D004708 ORTHO05D005573 8.4e-38 161.0 160 53.1
CSS0019358 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 5.5e-37 158.3 112 72.3
CBR_g4476 Chara braunii HOM05D003322 ORTHO05D004228 1.6e-36 156.8 151 54.3
Zm00001eb301320 Zea mays HOM05D004708 ORTHO05D005573 2.3e-35 152.9 155 55.5
Nitab4.5_0009165g0010 Nicotiana tabacum HOM05D000001 ORTHO05D013582 1.9e-34 149.8 103 74.8
Peaxi162Scf00130g00618 Petunia axillaris HOM05D004708 ORTHO05D005573 2.5e-34 149.4 174 48.9
Lj2A454G55 Lonicera japonica HOM05D004708 ORTHO05D005573 3.3e-34 149.1 143 55.2
PSO731G0046 Papaver somniferum HOM05D004708 ORTHO05D005573 6.3e-33 144.8 113 65.5
PSO384G2349 Papaver somniferum HOM05D004708 ORTHO05D005573 5.3e-32 141.7 159 51.6
arahy.Tifrunner.gnm1.ann1.W5EA8A Arachis hypogaea HOM05D004708 ORTHO05D005573 5.9e-31 138.3 96 78.1
Os02g0134000 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 5.0e-30 135.2 105 65.7
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 6.5e-30 134.8 167 47.9
Nn7g38122 Nelumbo nucifera HOM05D004708 ORTHO05D005573 4.2e-29 132.1 98 64.3
AagrBONN_evm.TU.Sc2ySwM_228.2017 Anthoceros agrestis HOM05D004708 ORTHO05D005573 1.2e-28 130.6 104 67.3
Actinidia33865 Actinidia chinensis HOM05D004708 ORTHO05D005573 1.3e-27 127.1 89 76.4
Pp3c18_18790 Physcomitrium patens HOM05D004708 ORTHO05D005573 3.0e-27 125.9 162 43.8
BraA09t36827Z Brassica rapa HOM05D004708 ORTHO05D005573 8.8e-27 124.4 105 62.9
CAN.G2875.1 Capsicum annuum HOM05D004708 ORTHO05D005573 9.7e-26 120.9 91 70.3
FAN26G2067 Fragaria x ananassa HOM05D004708 ORTHO05D005573 3.1e-24 115.9 84 66.7
Cre13.g590550 Chlamydomonas reinhardtii HOM05D004708 ORTHO05D005573 5.9e-23 111.7 135 40.7
AagrBONN_evm.TU.Sc2ySwM_368.1168 Anthoceros agrestis HOM05D004708 ORTHO05D005573 1.6e-20 103.6 70 71.4
CAN.G53.14 Capsicum annuum HOM05D004708 ORTHO05D005573 6.3e-17 91.7 52 80.8
C09p74780 Brassica napus HOM05D004708 ORTHO05D005573 1.4e-16 90.5 58 74.1
C09p74830 Brassica napus HOM05D004708 ORTHO05D005573 1.4e-16 90.5 58 74.1
HanXRQChr17g0534461 Helianthus annuus HOM05D004708 ORTHO05D005573 4.1e-16 89.0 69 59.4
Cfa027114 Carpinus fangiana HOM05D004708 ORTHO05D005573 9.1e-16 87.8 200 30.0
MCO08G231 Micromonas commoda HOM05D004708 ORTHO05D005573 5.0e-14 82.0 161 32.3
SGA_v2.0_scaffold276G46612 Striga asiatica HOM05D004708 ORTHO05D005573 5.5e-13 78.6 111 45.0
BcaC06g36392 Brassica carinata HOM05D000492 ORTHO05D005571 1.2e-12 77.4 57 70.2
PRCOL_00004729 Prasinoderma coloniale HOM05D004708 ORTHO05D005573 6.1e-12 75.1 152 33.6
CAN.G53.15 Capsicum annuum HOM05D004708 ORTHO05D005573 1.4e-11 73.9 52 76.9
Oeu044133.1 Olea europaea HOM05D004708 ORTHO05D005573 9.1e-08 61.2 45 64.4
arahy.Tifrunner.gnm1.ann1.7621NS Arachis hypogaea HOM05D054750 ORTHO05D005573 3.5e-07 59.3 32 87.5
Actinidia12710 Actinidia chinensis HOM05D004708 ORTHO05D005573 8.5e-06 54.7 38 63.2


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