Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24045 Trifolium pratense HOM05D000222 ORTHO05D025622 2.1e-94 349.0 171 100.0
Medtr1g025430 Medicago truncatula HOM05D000222 ORTHO05D000329 1.3e-11 73.9 38 84.2
TPR.G26394 Trifolium pratense HOM05D000222 ORTHO05D000329 1.3e-11 73.9 38 86.8
Glyma.14G219700 Glycine max HOM05D000222 ORTHO05D000329 1.7e-11 73.6 38 86.8
Glyma.17G258700 Glycine max HOM05D000222 ORTHO05D000329 1.7e-11 73.6 38 86.8
Lj5g0005976 Lotus japonicus HOM05D000222 ORTHO05D000329 5.0e-11 72.0 58 65.5
Phvul.001G005200 Phaseolus vulgaris HOM05D000222 ORTHO05D000329 8.4e-11 71.2 38 84.2
Psat6g002360 Pisum sativum HOM05D000222 ORTHO05D000329 2.5e-10 69.7 58 65.5
Hma1.2p1_0867F.1_g230170 Hydrangea macrophylla HOM05D000222 ORTHO05D025622 3.2e-10 69.3 47 66.0
Ca_13433_v3 Cicer arietinum L. HOM05D000222 ORTHO05D000329 4.2e-10 68.9 58 63.8
Hma1.2p1_0733F.1_g210310 Hydrangea macrophylla HOM05D000222 ORTHO05D000329 4.2e-10 68.9 38 78.9
Lalb_Chr19g0131441 Lupinus albus HOM05D000222 ORTHO05D000329 9.3e-10 67.8 58 62.1
HanXRQChr12g0366871 Helianthus annuus HOM05D000222 ORTHO05D000329 1.6e-09 67.0 65 50.8
Lalb_Chr03g0033421 Lupinus albus HOM05D000222 ORTHO05D000329 2.1e-09 66.6 66 48.5
VMungo0647G1547 Vigna mungo HOM05D000222 ORTHO05D000329 2.7e-09 66.2 65 53.8
arahy.Tifrunner.gnm1.ann1.T76A9L Arachis hypogaea HOM05D000222 ORTHO05D000329 3.5e-09 65.9 56 60.7
Lalb_Chr11g0061831 Lupinus albus HOM05D000222 ORTHO05D000329 3.5e-09 65.9 80 47.5
FvH4_2g38300 Fragaria vesca HOM05D000222 ORTHO05D000329 4.6e-09 65.5 54 59.3
FAN15G0622 Fragaria x ananassa HOM05D000222 ORTHO05D000329 4.6e-09 65.5 54 59.3
Cpa.g.sc64.164 Carica papaya HOM05D000222 ORTHO05D000329 6.1e-09 65.1 48 62.5
DCAR_013875 Daucus carota HOM05D000222 ORTHO05D000329 6.1e-09 65.1 38 73.7
RhsimUnG0065400 Rhododendron simsii HOM05D000222 ORTHO05D000329 7.9e-09 64.7 81 45.7
FAN20G2674 Fragaria x ananassa HOM05D000222 ORTHO05D000329 1.0e-08 64.3 54 57.4
FAN27G0624 Fragaria x ananassa HOM05D000222 ORTHO05D000329 1.0e-08 64.3 54 57.4
RcHm_v2.0_Chr6g0303071 Rosa chinensis HOM05D000222 ORTHO05D000329 1.0e-08 64.3 54 57.4
vmacro04362 Vaccinium macrocarpon HOM05D000222 ORTHO05D000329 1.0e-08 64.3 80 45.0
CANSAT78G1241 Cannabis sativa HOM05D000222 ORTHO05D000329 1.3e-08 63.9 38 73.7
Dinv39529 Davidia involucrata HOM05D000222 ORTHO05D000329 1.3e-08 63.9 38 73.7
arahy.Tifrunner.gnm1.ann1.P8FSM4 Arachis hypogaea HOM05D000222 ORTHO05D000329 1.8e-08 63.5 55 60.0
MD08G1011200 Malus domestica HOM05D000222 ORTHO05D000329 1.8e-08 63.5 54 59.3
TWI12G1180 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 1.8e-08 63.5 38 73.7
Hma1.2p1_0013F.1_g008210 Hydrangea macrophylla HOM05D000222 ORTHO05D000329 2.3e-08 63.2 36 77.8
TWI56G0657 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 2.3e-08 63.2 58 58.6
Prupe.1G363900 Prunus persica HOM05D000222 ORTHO05D000329 3.0e-08 62.8 58 58.6
ClCG08G014210 Citrullus lanatus HOM05D000222 ORTHO05D000329 3.9e-08 62.4 38 68.4
MELO3C011021.2 Cucumis melo HOM05D000222 ORTHO05D000329 3.9e-08 62.4 38 68.4
Dinv31860 Davidia involucrata HOM05D000222 ORTHO05D000329 3.9e-08 62.4 38 71.1
HanXRQChr13g0387091 Helianthus annuus HOM05D000222 ORTHO05D000329 3.9e-08 62.4 65 49.2
Lsat_1_v5_gn_8_30781 Lactuca sativa HOM05D000222 ORTHO05D000329 3.9e-08 62.4 65 49.2
Lj4C22T9 Lonicera japonica HOM05D000222 ORTHO05D000329 3.9e-08 62.4 38 71.1
ECA233G5047 Erigeron canadensis HOM05D000222 ORTHO05D000329 5.1e-08 62.0 65 47.7
AUR62040542 Chenopodium quinoa HOM05D000222 ORTHO05D000329 6.7e-08 61.6 66 47.0
Eucgr.H00972 Eucalyptus grandis HOM05D000222 ORTHO05D000329 6.7e-08 61.6 56 53.6
MSTRG.1183 Avicennia marina HOM05D000222 ORTHO05D000329 8.7e-08 61.2 39 71.8
Migut.C00851 Erythranthe guttata HOM05D000222 ORTHO05D000329 8.7e-08 61.2 38 71.1
CSS0018705 Camellia sinensis var. sinensis HOM05D000222 ORTHO05D000329 1.5e-07 60.5 38 71.1
Os06g0716700 Oryza sativa ssp. japonica HOM05D000222 ORTHO05D000329 1.5e-07 60.5 37 70.3
PGR083G1489 Punica granatum HOM05D000222 ORTHO05D000329 1.5e-07 60.5 58 53.4
Sed0002325 Sechium edule HOM05D000222 ORTHO05D000329 1.5e-07 60.5 65 44.6
Actinidia15430 Actinidia chinensis HOM05D000222 ORTHO05D000329 1.9e-07 60.1 65 47.7
Migut.N03167 Erythranthe guttata HOM05D000222 ORTHO05D000329 1.9e-07 60.1 38 71.1
Nitab4.5_0000337g0070 Nicotiana tabacum HOM05D000222 ORTHO05D000329 1.9e-07 60.1 38 68.4
PSO541G0316 Papaver somniferum HOM05D000222 ORTHO05D000329 2.5e-07 59.7 39 71.8
PSO675G6717 Papaver somniferum HOM05D000222 ORTHO05D000329 2.5e-07 59.7 39 71.8
Hund05159 Selenicereus undatus HOM05D000222 ORTHO05D000329 2.5e-07 59.7 38 65.8
Glyma.03G065300 Glycine max HOM05D000222 ORTHO05D025622 3.3e-07 59.3 35 77.1
Nitab4.5_0003251g0080 Nicotiana tabacum HOM05D000222 ORTHO05D000329 3.3e-07 59.3 38 68.4
QL02p011881 Quercus lobata HOM05D000222 ORTHO05D000329 3.3e-07 59.3 56 57.1
Sed0003929 Sechium edule HOM05D000222 ORTHO05D000329 3.3e-07 59.3 65 46.2
GSVIVG01009931001 Vitis vinifera HOM05D000222 ORTHO05D000329 3.3e-07 59.3 38 68.4
MSTRG.25258 Avicennia marina HOM05D000222 ORTHO05D000329 4.3e-07 58.9 38 71.1
EL10Ac1g02175 Beta vulgaris HOM05D000222 ORTHO05D000329 4.3e-07 58.9 38 63.2
CsaV3_2G029630 Cucumis sativus L. HOM05D000222 ORTHO05D000329 4.3e-07 58.9 38 65.8
Potri.005G241100 Populus trichocarpa HOM05D000222 ORTHO05D000329 4.3e-07 58.9 38 68.4
Haze_22648 Corylus avellana HOM05D000222 ORTHO05D000329 5.7e-07 58.5 49 57.1
DCAR_023014 Daucus carota HOM05D000222 ORTHO05D000329 5.7e-07 58.5 64 46.9
Nitab4.5_0000337g0060 Nicotiana tabacum HOM05D000222 ORTHO05D000329 5.7e-07 58.5 38 65.8
Psat0s454g0080 Pisum sativum HOM05D000002 ORTHO05D000001 5.7e-07 58.5 131 36.6
SalBow8G4062 Salvia bowleyana HOM05D000222 ORTHO05D000329 5.7e-07 58.5 38 68.4
AUR62041482 Chenopodium quinoa HOM05D000222 ORTHO05D000329 7.4e-07 58.2 64 45.3
Solyc04g081570.3 Solanum lycopersicum HOM05D000222 ORTHO05D000329 7.4e-07 58.2 38 68.4
PGSC0003DMG400009940 Solanum tuberosum HOM05D000222 ORTHO05D000329 7.4e-07 58.2 38 68.4
Zm00001eb346820 Zea mays HOM05D000222 ORTHO05D000329 7.4e-07 58.2 44 59.1
CAN.G311.42 Capsicum annuum HOM05D000222 ORTHO05D000329 9.7e-07 57.8 38 65.8
CDE05G1631 Ceratophyllum demersum HOM05D000222 ORTHO05D000329 9.7e-07 57.8 82 41.5
Zm00001eb228120 Zea mays HOM05D000222 ORTHO05D000329 9.7e-07 57.8 51 54.9
CiPaw.08G067100 Carya illinoinensis HOM05D000222 ORTHO05D000329 1.6e-06 57.0 48 60.4
Sopen04g035180 Solanum pennellii HOM05D000222 ORTHO05D000329 1.6e-06 57.0 38 68.4
TAR536G0015 Trochodendron aralioides HOM05D000222 ORTHO05D000329 1.6e-06 57.0 59 54.2
Zm00001eb181950 Zea mays HOM05D000222 ORTHO05D000329 1.6e-06 57.0 37 64.9
Lalb_Chr08g0246171 Lupinus albus HOM05D000222 ORTHO05D000329 2.2e-06 56.6 65 47.7
Cfa013966 Carpinus fangiana HOM05D000222 ORTHO05D000329 2.8e-06 56.2 48 56.2
CDE05G2968 Ceratophyllum demersum HOM05D000222 ORTHO05D000329 2.8e-06 56.2 82 41.5
Ciclev10000296m.g Citrus clementina HOM05D000222 ORTHO05D000329 2.8e-06 56.2 58 51.7
Psat5g083200 Pisum sativum HOM05D000002 ORTHO05D000001 2.8e-06 56.2 79 44.3
Lj4C798T7 Lonicera japonica HOM05D000222 ORTHO05D000329 3.7e-06 55.8 65 46.2
Peaxi162Scf00553g00114 Petunia axillaris HOM05D000222 ORTHO05D000329 3.7e-06 55.8 38 65.8
THA.LOC104813226 Tarenaya hassleriana HOM05D000222 ORTHO05D000329 3.7e-06 55.8 38 60.5
Atru.chr13.271 Acer truncatum HOM05D000222 ORTHO05D000329 4.8e-06 55.5 56 51.8
Cc10_g01540 Coffea canephora HOM05D000222 ORTHO05D000329 4.8e-06 55.5 38 65.8
TAR628G0053 Trochodendron aralioides HOM05D000222 ORTHO05D000329 4.8e-06 55.5 39 66.7
Zm00001eb026610 Zea mays HOM05D000222 ORTHO05D444596 4.8e-06 55.5 72 41.7
MBI05_g33509_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D000329 6.3e-06 55.1 41 65.9
SGA_v2.0_scaffold11G05934 Striga asiatica HOM05D000222 ORTHO05D000329 6.3e-06 55.1 40 67.5
Gohir.A01G110500 Gossypium hirsutum HOM05D000222 ORTHO05D000329 8.2e-06 54.7 48 58.3
Gohir.D01G097100 Gossypium hirsutum HOM05D000222 ORTHO05D000329 8.2e-06 54.7 48 58.3
Gorai.002G122800 Gossypium raimondii HOM05D000222 ORTHO05D000329 8.2e-06 54.7 48 58.3
MBI05_g33510_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D000329 8.2e-06 54.7 83 44.6
Psat1g154000 Pisum sativum HOM05D000002 ORTHO05D000001 8.2e-06 54.7 79 44.3


User provided reference genes

Program Settings