Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G24042 Trifolium pratense HOM05D006136 ORTHO05D007244 4.3e-40 167.5 84 100.0
Ca_02520_v3 Cicer arietinum L. HOM05D006136 ORTHO05D007244 1.5e-21 105.9 73 72.6
TPR.G18712 Trifolium pratense HOM05D006136 ORTHO05D007244 3.2e-19 98.2 51 94.1
Glyma.09G084800 Glycine max HOM05D006136 ORTHO05D007244 6.0e-18 94.0 75 61.3
Psat1g019160 Pisum sativum HOM05D006136 ORTHO05D007244 3.0e-17 91.7 54 77.8
Medtr2g048340 Medicago truncatula HOM05D006136 ORTHO05D007244 3.9e-17 91.3 53 77.4
Glyma.15G193100 Glycine max HOM05D006136 ORTHO05D007244 5.1e-17 90.9 77 59.7
Lj6g0010551 Lotus japonicus HOM05D006136 ORTHO05D007244 2.1e-15 85.5 56 69.6
Lalb_Chr08g0233201 Lupinus albus HOM05D006136 ORTHO05D007244 3.6e-15 84.7 52 75.0
Phvul.009G217200 Phaseolus vulgaris HOM05D006136 ORTHO05D007244 1.2e-13 79.7 55 65.5
VMungo1309G0146 Vigna mungo HOM05D006136 ORTHO05D007244 3.4e-13 78.2 55 63.6
Psat1g163200 Pisum sativum HOM05D000871 ORTHO05D008698 1.7e-12 75.9 82 51.2
Psat1g163240 Pisum sativum HOM05D007111 ORTHO05D008698 1.7e-12 75.9 82 51.2
Haze_21244 Corylus avellana HOM05D006136 ORTHO05D007244 1.1e-08 63.2 62 51.6
Cfa012873 Carpinus fangiana HOM05D006136 ORTHO05D007244 4.3e-08 61.2 62 51.6
CSS0003139 Camellia sinensis var. sinensis HOM05D006136 ORTHO05D007244 9.6e-08 60.1 70 47.1
Thecc.09G202200 Theobroma cacao HOM05D006136 ORTHO05D007244 1.6e-07 59.3 68 50.0
Dinv12632 Davidia involucrata HOM05D006136 ORTHO05D002774 2.1e-07 58.9 67 49.3
Manes.02G224001 Manihot esculenta HOM05D006136 ORTHO05D007244 2.1e-07 58.9 44 63.6
Manes.11G052190 Manihot esculenta HOM05D006136 ORTHO05D007244 2.1e-07 58.9 44 63.6
Atru.chr7.1014 Acer truncatum HOM05D006136 ORTHO05D007244 2.8e-07 58.5 72 43.1
Ciclev10007497m.g Citrus clementina HOM05D006136 ORTHO05D007244 2.8e-07 58.5 57 49.1
vmacro17832 Vaccinium macrocarpon HOM05D006136 ORTHO05D007244 2.8e-07 58.5 41 61.0
Gohir.D08G026500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 3.6e-07 58.2 67 46.3
CiPaw.07G237600 Carya illinoinensis HOM05D006136 ORTHO05D007244 4.7e-07 57.8 61 49.2
QL11p005727 Quercus lobata HOM05D006136 ORTHO05D007244 4.7e-07 57.8 62 45.2
arahy.Tifrunner.gnm1.ann1.46MDAV Arachis hypogaea HOM05D006136 ORTHO05D007244 1.1e-06 56.6 71 49.3
Gorai.004G023000 Gossypium raimondii HOM05D006136 ORTHO05D007244 1.1e-06 56.6 64 50.0
GSVIVG01038350001 Vitis vinifera HOM05D006136 ORTHO05D007244 1.1e-06 56.6 41 70.7
Sed0020259 Sechium edule HOM05D006136 ORTHO05D007244 1.4e-06 56.2 66 48.5
Rhsim08G0117200 Rhododendron simsii HOM05D006136 ORTHO05D007244 2.4e-06 55.5 70 41.4
MD04G1000700 Malus domestica HOM05D006136 ORTHO05D007244 5.2e-06 54.3 68 39.7
Gohir.A08G016500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 6.9e-06 53.9 70 42.9


User provided reference genes

Program Settings