Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 1.5e-119 433.0 232 100.0
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 8.9e-88 327.4 232 78.0
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 1.2e-87 327.0 232 78.4
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 1.5e-87 326.6 235 79.6
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 4.0e-80 302.0 232 72.4
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 7.8e-76 287.7 229 70.3
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 3.0e-75 285.8 230 69.6
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.1e-74 283.9 232 68.5
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 7.5e-71 271.2 232 67.2
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 2.4e-69 266.2 197 75.6
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 1.6e-68 263.5 191 75.4
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 7.1e-53 211.5 218 55.5
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 7.1e-53 211.5 214 54.2
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 1.0e-51 207.6 228 53.1
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 1.7e-51 206.8 223 56.5
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 5.1e-51 205.3 231 53.7
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 1.5e-50 203.8 214 53.7
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 3.3e-50 202.6 227 52.9
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 9.6e-50 201.1 230 53.5
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.3e-49 200.7 227 52.4
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.1e-49 199.9 227 52.9
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 2.8e-49 199.5 223 53.8
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.8e-48 196.8 227 52.4
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 3.1e-48 196.1 226 53.1
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 6.9e-48 194.9 220 50.9
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 1.2e-47 194.1 210 55.7
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 2.0e-47 193.4 224 51.8
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 2.6e-47 193.0 246 49.6
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 4.5e-47 192.2 219 55.3
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 9.9e-47 191.0 219 54.8
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 1.9e-45 186.8 220 51.8
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 4.2e-45 185.7 208 51.9
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 3.5e-44 182.6 217 52.1
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 4.6e-44 182.2 253 46.2
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 6.0e-44 181.8 214 53.3
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 2.3e-43 179.9 212 52.8
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 2.3e-43 179.9 216 50.5
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 6.7e-43 178.3 206 51.5
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 1.1e-42 177.6 209 49.8
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 1.9e-42 176.8 223 49.8
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 1.3e-41 174.1 230 47.4
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 2.1e-41 173.3 107 86.0
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 2.8e-41 172.9 221 48.4
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 4.8e-41 172.2 228 46.1
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 6.2e-41 171.8 230 47.4
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 1.1e-40 171.0 210 48.6
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 1.1e-40 171.0 202 52.0
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 2.4e-40 169.9 221 46.6
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 2.4e-40 169.9 227 47.1
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 3.1e-40 169.5 205 49.3
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 4.0e-40 169.1 212 45.8
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 4.0e-40 169.1 225 48.0
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 5.3e-40 168.7 226 45.6
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 1.5e-39 167.2 206 50.0
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 1.5e-39 167.2 231 44.2
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 1.3e-38 164.1 193 50.8
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 1.7e-38 163.7 206 48.5
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 2.2e-38 163.3 217 46.1
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 6.4e-38 161.8 116 75.0
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 8.4e-38 161.4 246 43.5
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 1.4e-37 160.6 229 45.0
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 2.4e-37 159.8 221 46.6
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 3.2e-37 159.5 203 46.8
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 9.3e-37 157.9 208 45.2
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 1.6e-36 157.1 216 44.0
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 3.5e-36 156.0 193 49.7
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 1.8e-35 153.7 227 43.6
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 2.3e-35 153.3 208 44.2
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 3.9e-35 152.5 203 46.3
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 1.1e-34 151.0 222 42.3
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 1.5e-34 150.6 225 42.7
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 7.4e-34 148.3 225 42.7
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 1.8e-32 143.7 218 43.1
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 1.8e-32 143.7 209 43.5
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 2.4e-32 143.3 252 39.3
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 3.1e-32 142.9 234 40.6
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 4.0e-32 142.5 163 52.1
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 1.5e-31 140.6 230 43.5
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.0e-31 140.2 215 41.9
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 7.6e-31 138.3 220 44.5
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 1.3e-30 137.5 209 42.1
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 2.9e-30 136.3 228 42.1
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 3.8e-30 136.0 231 38.1
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 6.5e-30 135.2 228 42.1
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 8.4e-30 134.8 229 38.4
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 3.2e-29 132.9 195 43.1
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 3.5e-28 129.4 163 50.3
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 3.5e-28 129.4 126 59.5
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.0e-27 127.9 183 45.4
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 1.1e-26 124.4 204 38.2
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 5.7e-26 122.1 179 41.9
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 7.4e-26 121.7 187 44.9
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 1.3e-25 120.9 178 46.1
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 5.3e-24 115.5 180 44.4
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 1.2e-23 114.4 204 39.2
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 1.5e-23 114.0 99 60.6
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 5.9e-23 112.1 219 39.7
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 1.0e-22 111.3 230 39.1
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 1.0e-22 111.3 230 39.1
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 1.7e-22 110.5 188 41.0
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 2.9e-22 109.8 179 39.1
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 6.5e-22 108.6 230 38.7
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 1.4e-21 107.5 221 38.5
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 2.5e-21 106.7 212 38.7
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 2.5e-21 106.7 199 42.2
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 5.5e-21 105.5 231 38.1
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 5.5e-21 105.5 198 38.9
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 2.7e-20 103.2 214 37.9
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 4.6e-20 102.4 215 34.4
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 6.1e-20 102.1 231 35.1
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 6.1e-20 102.1 210 39.5
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 1.8e-19 100.5 225 38.7
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 4.3e-18 95.9 162 39.5
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 5.7e-18 95.5 225 36.4
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 5.7e-18 95.5 225 36.4
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 5.7e-18 95.5 225 36.4
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 5.7e-18 95.5 225 36.4
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 7.4e-18 95.1 125 44.0
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 1.7e-17 94.0 114 49.1
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 1.7e-17 94.0 188 38.3
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 3.7e-17 92.8 206 33.0
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 5.3e-16 89.0 116 46.6
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 6.9e-16 88.6 130 44.6
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 9.1e-16 88.2 192 34.4
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 1.3e-14 84.3 223 35.4
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.3e-14 84.3 121 41.3
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 1.7e-14 84.0 160 42.5
CDE08G0630 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 1.1e-13 81.3 129 38.0
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 7.9e-12 75.1 229 32.3
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 1.4e-11 74.3 147 36.1
Nitab4.5_0000867g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 6.3e-09 65.5 122 35.2


User provided reference genes

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