Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 9.0e-267 922.9 436 100.0
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 6.9e-235 817.0 437 87.2
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 3.3e-229 798.1 436 86.0
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 3.3e-229 798.1 436 86.0
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 6.5e-225 783.9 437 85.1
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 5.3e-219 764.2 432 82.9
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 1.8e-211 739.2 439 80.6
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 9.4e-208 726.9 438 78.3
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 2.1e-207 725.7 439 78.8
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 3.0e-206 721.8 437 78.5
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 3.1e-203 711.8 438 77.9
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 7.0e-195 684.1 434 73.3
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 5.0e-193 677.9 432 73.8
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 1.6e-191 672.9 429 74.6
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 6.1e-191 671.0 435 72.0
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.8e-190 669.5 431 72.2
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 2.3e-190 669.1 431 71.5
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 8.9e-190 667.2 432 71.3
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 5.8e-189 664.5 432 71.1
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 9.8e-189 663.7 429 72.3
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 2.9e-188 662.1 435 70.3
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 6.4e-188 661.0 434 70.7
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 1.9e-187 659.4 429 71.8
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 4.1e-187 658.3 432 72.7
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 4.1e-187 658.3 434 71.2
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 5.4e-187 657.9 434 71.2
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 7.0e-187 657.5 427 71.0
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 7.0e-187 657.5 427 71.0
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 1.6e-186 656.4 434 71.2
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 4.6e-186 654.8 425 72.0
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.7e-185 652.9 424 71.7
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 5.0e-185 651.4 434 70.0
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 5.0e-185 651.4 431 69.1
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 5.0e-185 651.4 427 70.5
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 6.6e-185 651.0 424 71.5
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 8.6e-185 650.6 427 71.2
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 8.6e-185 650.6 433 70.9
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 1.5e-184 649.8 429 72.0
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 4.3e-184 648.3 427 70.3
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 1.2e-183 646.7 437 70.3
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 2.8e-183 645.6 424 70.8
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.8e-183 645.6 424 70.8
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 2.8e-183 645.6 424 70.8
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 6.2e-183 644.4 432 69.0
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 2.3e-182 642.5 424 70.5
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 8.9e-182 640.6 433 69.3
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 3.4e-181 638.6 434 69.4
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 5.8e-181 637.9 431 68.9
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 1.7e-180 636.3 432 68.8
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 2.9e-180 635.6 426 68.5
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 8.3e-180 634.0 426 70.0
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 8.3e-180 634.0 428 68.0
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 2.4e-179 632.5 437 67.5
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 4.1e-179 631.7 424 70.3
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 7.0e-179 630.9 428 69.6
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 1.2e-178 630.2 426 67.6
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 1.6e-178 629.8 428 69.2
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 3.5e-178 628.6 433 66.5
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 4.6e-178 628.2 429 68.8
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 6.0e-178 627.9 426 66.7
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 2.3e-177 625.9 428 68.9
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 5.1e-177 624.8 430 68.4
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 2.5e-176 622.5 426 69.0
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 3.3e-176 622.1 424 69.8
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 5.6e-176 621.3 428 68.0
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 5.6e-176 621.3 426 66.2
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 7.3e-176 620.9 429 67.4
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 1.6e-175 619.8 432 68.5
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 6.2e-175 617.8 426 65.7
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 8.1e-175 617.5 429 66.2
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 8.1e-175 617.5 424 68.4
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 1.8e-174 616.3 427 67.7
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 2.6e-173 612.5 433 66.7
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 9.9e-173 610.5 429 67.1
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 9.9e-173 610.5 428 68.2
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 2.9e-172 609.0 429 66.4
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 2.4e-171 605.9 355 75.8
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 3.2e-171 605.5 434 63.1
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 9.2e-171 604.0 430 65.8
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 4.6e-170 601.7 356 75.8
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 6.0e-170 601.3 429 66.4
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 6.0e-170 601.3 421 66.3
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 7.8e-170 600.9 392 69.4
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 5.1e-169 598.2 430 66.3
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 8.6e-169 597.4 433 64.9
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 1.5e-168 596.7 434 63.8
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 2.5e-168 595.9 434 65.9
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 2.5e-168 595.9 438 63.9
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 4.7e-167 591.7 431 64.0
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 3.1e-166 589.0 423 64.1
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 3.1e-166 589.0 344 75.3
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 1.7e-164 583.2 348 75.3
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 6.4e-164 581.3 352 73.6
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 2.4e-163 579.3 423 63.8
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 4.2e-163 578.6 423 63.8
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 9.2e-163 577.4 423 63.4
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 4.6e-162 575.1 378 68.3
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 1.0e-161 573.9 340 74.4
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 3.0e-161 572.4 425 64.5
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 3.9e-161 572.0 423 62.6
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 3.9e-161 572.0 423 62.6
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 3.9e-161 572.0 364 70.1
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 8.7e-161 570.9 434 64.3
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 3.3e-160 568.9 424 63.2
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 4.3e-160 568.5 419 64.2
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 7.3e-160 567.8 386 65.5
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 1.3e-159 567.0 365 68.5
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 2.4e-158 562.8 430 60.2
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 5.8e-157 558.1 359 69.9
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 1.1e-155 553.9 407 65.4
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 3.9e-153 545.4 289 83.4
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 1.5e-149 533.5 430 60.2
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 4.9e-148 528.5 433 60.0
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 7.4e-144 514.6 283 79.5
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 2.4e-142 509.6 413 58.4
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 1.2e-138 497.3 357 61.9
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 8.7e-137 491.1 357 61.3
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 1.6e-127 460.3 364 58.5
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 1.0e-116 424.5 322 62.7
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 2.9e-100 369.8 216 72.7
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 5.0e-100 369.0 357 51.3
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 1.4e-97 360.9 210 76.2
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 6.8e-97 358.6 211 75.4
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 1.6e-93 347.4 297 55.2
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 3.2e-62 243.4 260 52.7
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 1.9e-54 217.6 402 38.3
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 2.0e-32 144.4 101 61.4
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 5.3e-25 119.8 58 87.9
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 1.2e-24 118.6 80 65.0
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.3e-15 88.6 113 40.7


User provided reference genes

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