Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23974 Trifolium pratense HOM05D006167 ORTHO05D007635 1.2e-62 243.0 122 100.0
Psat6g109400 Pisum sativum HOM05D006167 ORTHO05D007635 7.9e-19 97.4 65 73.8
Ca_00011_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 8.1e-16 87.4 61 72.1
Lalb_Chr03g0036881 Lupinus albus HOM05D006167 ORTHO05D007635 4.0e-15 85.1 57 66.7
Glyma.20G081600 Glycine max HOM05D006167 ORTHO05D007635 5.3e-15 84.7 62 66.1
Ca_26216_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 9.0e-15 84.0 61 68.9
Lj4g0015547 Lotus japonicus HOM05D006167 ORTHO05D007635 3.4e-14 82.0 62 71.0
CANSAT78G0928 Cannabis sativa HOM05D006167 ORTHO05D007635 7.6e-14 80.9 58 63.8
Prupe.1G052700 Prunus persica HOM05D006167 ORTHO05D007635 2.4e-12 75.9 57 61.4
CANSAT54G0143 Cannabis sativa HOM05D006167 ORTHO05D007635 3.2e-12 75.5 57 61.4
Atru.chr4.1872 Acer truncatum HOM05D006167 ORTHO05D007635 1.2e-11 73.6 58 62.1
ClCG06G007470 Citrullus lanatus HOM05D006167 ORTHO05D007635 2.7e-11 72.4 58 62.1
CsaV3_2G012210 Cucumis sativus L. HOM05D006167 ORTHO05D007635 2.7e-11 72.4 58 62.1
Sed0006558 Sechium edule HOM05D006167 ORTHO05D007635 2.7e-11 72.4 58 63.8
MELO3C023070.2 Cucumis melo HOM05D006167 ORTHO05D007635 3.5e-11 72.0 58 60.3
Cfa014825 Carpinus fangiana HOM05D006167 ORTHO05D007635 4.6e-11 71.6 58 58.6
THA.LOC109117012 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 7.9e-11 70.9 58 58.6
Phvul.007G232600 Phaseolus vulgaris HOM05D006167 ORTHO05D007635 1.0e-10 70.5 62 61.3
Hma1.2p1_0112F.1_g054980 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.8e-10 69.7 57 57.9
CiPaw.01G175200 Carya illinoinensis HOM05D006167 ORTHO05D007635 2.3e-10 69.3 58 56.9
Potri.010G063100 Populus trichocarpa HOM05D006167 ORTHO05D007635 2.3e-10 69.3 58 58.6
Carub.0007s2902 Capsella rubella HOM05D006167 ORTHO05D007635 3.0e-10 68.9 58 60.3
Lsat_1_v5_gn_1_76160 Lactuca sativa HOM05D006167 ORTHO05D007635 3.0e-10 68.9 60 58.3
Sp7g11110 Schrenkiella parvula HOM05D006167 ORTHO05D007635 3.9e-10 68.6 58 58.6
THA.LOC109116489 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 3.9e-10 68.6 58 56.9
THA.LOC109116515 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 3.9e-10 68.6 58 56.9
CARHR219150 Cardamine hirsuta HOM05D006167 ORTHO05D007635 6.7e-10 67.8 58 60.3
Thhalv10026745m.g Eutrema salsugineum HOM05D006167 ORTHO05D007635 6.7e-10 67.8 58 58.6
HanXRQChr13g0410431 Helianthus annuus HOM05D006167 ORTHO05D007635 8.7e-10 67.4 60 56.7
TWI09G0967 Tripterygium wilfordii HOM05D006167 ORTHO05D007635 8.7e-10 67.4 58 60.3
BcaB04g17822 Brassica carinata HOM05D006167 ORTHO05D007635 2.5e-09 65.9 58 55.2
BcaC07g37498 Brassica carinata HOM05D006167 ORTHO05D007635 2.5e-09 65.9 58 55.2
A08p07960 Brassica napus HOM05D006167 ORTHO05D007635 2.5e-09 65.9 58 55.2
BolC8t47817H Brassica oleracea HOM05D006167 ORTHO05D007635 2.5e-09 65.9 58 55.2
BraA08t32818Z Brassica rapa HOM05D006167 ORTHO05D007635 2.5e-09 65.9 58 55.2
Eucgr.H02882 Eucalyptus grandis HOM05D006167 ORTHO05D007635 2.5e-09 65.9 59 59.3
AL7G43090 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 3.3e-09 65.5 58 56.9
Potri.008G174000 Populus trichocarpa HOM05D006167 ORTHO05D007635 3.3e-09 65.5 58 55.2
Aa31LG9G4150 Aethionema arabicum HOM05D006167 ORTHO05D007635 4.3e-09 65.1 59 55.9
AT4G13520 Arabidopsis thaliana HOM05D006167 ORTHO05D007635 4.3e-09 65.1 58 56.9
Cpa.g.sc59.38 Carica papaya HOM05D006167 ORTHO05D007635 4.3e-09 65.1 58 55.2
EL10Ac3g06721 Beta vulgaris HOM05D006167 ORTHO05D007635 5.6e-09 64.7 66 54.5
Nn1g03031 Nelumbo nucifera HOM05D006167 ORTHO05D007635 5.6e-09 64.7 55 56.4
PGR004G2513 Punica granatum HOM05D006167 ORTHO05D007635 5.6e-09 64.7 58 56.9
TAR362G1146 Trochodendron aralioides HOM05D006167 ORTHO05D007635 5.6e-09 64.7 53 58.5
AL5G12040 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 7.4e-09 64.3 58 56.9
AL5G12300 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 7.4e-09 64.3 58 56.9
ECA248G1405 Erigeron canadensis HOM05D006167 ORTHO05D007635 7.4e-09 64.3 77 49.4
Hma1.2p1_0014F.1_g009760 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.3e-08 63.5 59 54.2
Aqoxy5G00097 Aquilegia oxysepala HOM05D006167 ORTHO05D007635 1.6e-08 63.2 53 60.4
Dinv29784 Davidia involucrata HOM05D006167 ORTHO05D007635 1.6e-08 63.2 65 53.8
FvH4_4g05200 Fragaria vesca HOM05D006167 ORTHO05D007635 1.6e-08 63.2 59 50.8
FAN12G1688 Fragaria x ananassa HOM05D006167 ORTHO05D007635 1.6e-08 63.2 59 50.8
FAN17G0547 Fragaria x ananassa HOM05D006167 ORTHO05D007635 1.6e-08 63.2 59 50.8
SalBow5G4407 Salvia bowleyana HOM05D006167 ORTHO05D007635 2.1e-08 62.8 78 52.6
SalBow5G4759 Salvia bowleyana HOM05D006167 ORTHO05D007635 2.1e-08 62.8 78 52.6
arahy.Tifrunner.gnm1.ann1.C36CE0 Arachis hypogaea HOM05D000254 ORTHO05D000165 6.2e-08 61.2 49 59.2
Hma1.2p1_0432F.1_g151790 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 6.2e-08 61.2 58 53.4
SalBow3G0251 Salvia bowleyana HOM05D006167 ORTHO05D007635 6.2e-08 61.2 67 58.2
SalBow3G4531 Salvia bowleyana HOM05D006167 ORTHO05D007635 6.2e-08 61.2 67 58.2
DCAR_027359 Daucus carota HOM05D006167 ORTHO05D007635 8.1e-08 60.8 60 56.7
SalBow5G0916 Salvia bowleyana HOM05D006167 ORTHO05D007635 8.1e-08 60.8 66 57.6
SalBow5G2020 Salvia bowleyana HOM05D006167 ORTHO05D007635 8.1e-08 60.8 66 57.6
Cc03_g06850 Coffea canephora HOM05D006167 ORTHO05D007635 1.1e-07 60.5 62 50.0
Lsat_1_v5_gn_2_42001 Lactuca sativa HOM05D006167 ORTHO05D007635 1.1e-07 60.5 59 52.5
CSS0017011 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 1.4e-07 60.1 58 50.0
CSS0046609 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 1.4e-07 60.1 58 50.0
RcHm_v2.0_Chr4g0396111 Rosa chinensis HOM05D006167 ORTHO05D007635 1.4e-07 60.1 82 41.5
Migut.N00323 Erythranthe guttata HOM05D006167 ORTHO05D007635 2.4e-07 59.3 62 58.1
SGA_v2.0_scaffold189G40388 Striga asiatica HOM05D006167 ORTHO05D007635 2.4e-07 59.3 69 58.0
Actinidia32969 Actinidia chinensis HOM05D006167 ORTHO05D007635 4.0e-07 58.5 60 50.0
Solyc12g097040.1 Solanum lycopersicum HOM05D006167 ORTHO05D007635 4.0e-07 58.5 60 50.0
CAN.G566.4 Capsicum annuum HOM05D006167 ORTHO05D007635 5.3e-07 58.2 62 51.6
Peaxi162Scf01007g00005 Petunia axillaris HOM05D006167 ORTHO05D007635 5.3e-07 58.2 66 53.0
SEGI_07901 Sequoiadendron giganteum HOM05D006167 ORTHO05D007635 5.3e-07 58.2 68 45.6
Nitab4.5_0000867g0070 Nicotiana tabacum HOM05D006167 ORTHO05D007635 6.9e-07 57.8 57 50.9
Rhsim09G0043900 Rhododendron simsii HOM05D006167 ORTHO05D007635 1.2e-06 57.0 54 59.3
SGA_v2.0_scaffold35G14127 Striga asiatica HOM05D006167 ORTHO05D007635 1.2e-06 57.0 69 55.1
AUR62035353 Chenopodium quinoa HOM05D006167 ORTHO05D007635 2.0e-06 56.2 54 55.6
Dinv18834 Davidia involucrata HOM05D006167 ORTHO05D007635 2.0e-06 56.2 65 52.3
Thecc.04G269200 Theobroma cacao HOM05D006167 ORTHO05D007635 2.0e-06 56.2 61 50.8
COL.COLO4_16007 Corchorus olitorius HOM05D006167 ORTHO05D007635 3.4e-06 55.5 44 63.6
Hma1.2p1_0144F.1_g065120 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 3.4e-06 55.5 58 46.6
SHI00872 Sapria himalayana HOM05D006167 ORTHO05D007635 4.5e-06 55.1 53 50.9
unitig_744.g24610 Utricularia gibba HOM05D006167 ORTHO05D007635 4.5e-06 55.1 61 54.1
Oeu012938.1 Olea europaea HOM05D006167 ORTHO05D007635 5.8e-06 54.7 60 50.0
Duzib052G0384 Durio zibethinus HOM05D006167 ORTHO05D007635 1.0e-05 53.9 44 61.4
Duzib052G0895 Durio zibethinus HOM05D006167 ORTHO05D007635 1.0e-05 53.9 44 61.4
Duzib266G0005 Durio zibethinus HOM05D006167 ORTHO05D007635 1.0e-05 53.9 44 61.4


User provided reference genes

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