Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23739 Trifolium pratense HOM05D008547 ORTHO05D010515 4.1e-144 514.6 242 100.0
TPR.G8333 Trifolium pratense HOM05D008547 ORTHO05D010515 2.9e-113 412.1 244 83.6
Medtr6g004080 Medicago truncatula HOM05D008547 ORTHO05D010515 1.2e-103 380.2 247 77.3
TPR.G32061 Trifolium pratense HOM05D008547 ORTHO05D010515 8.9e-99 364.0 258 70.9
TPR.G27684 Trifolium pratense HOM05D008547 ORTHO05D010515 6.4e-97 357.8 229 76.4
Medtr8g065650 Medicago truncatula HOM05D008547 ORTHO05D010515 2.5e-85 319.3 246 63.4
Medtr8g027525 Medicago truncatula HOM05D008547 ORTHO05D010515 1.6e-71 273.5 238 56.7
Ca_23530_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 7.4e-69 264.6 241 56.4
Ca_15277_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 2.4e-67 259.6 235 55.7
Ca_15416_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 2.4e-67 259.6 235 55.7
Ca_14816_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 2.9e-65 252.7 247 54.3
TPR.G26111 Trifolium pratense HOM05D008547 ORTHO05D010515 4.9e-65 251.9 237 54.4
Ca_17126_v3 Cicer arietinum L. HOM05D008547 ORTHO05D010515 2.5e-64 249.6 246 54.9
TPR.G21917 Trifolium pratense HOM05D008547 ORTHO05D010515 2.5e-64 249.6 151 81.5
Medtr5g090860 Medicago truncatula HOM05D008547 ORTHO05D010515 5.5e-64 248.4 234 55.1
TPR.G16823 Trifolium pratense HOM05D008547 ORTHO05D010515 2.1e-63 246.5 237 52.3
Medtr1g102770 Medicago truncatula HOM05D008547 ORTHO05D010515 2.7e-63 246.1 237 54.4
Psat1g047400 Pisum sativum HOM05D008547 ORTHO05D010515 7.6e-58 228.0 231 51.5
TPR.G16819 Trifolium pratense HOM05D008547 ORTHO05D010515 1.4e-56 223.8 239 49.8
Medtr5g009560 Medicago truncatula HOM05D008547 ORTHO05D010515 4.2e-56 222.2 241 49.4
Medtr8g027595 Medicago truncatula HOM05D008547 ORTHO05D010515 1.6e-55 220.3 237 48.9
Psat4g161600 Pisum sativum HOM05D008547 ORTHO05D010515 1.3e-54 217.2 240 48.3
Psat4g187360 Pisum sativum HOM05D008547 ORTHO05D010515 1.3e-54 217.2 242 47.1
TPR.G39730 Trifolium pratense HOM05D008547 ORTHO05D010515 8.7e-54 214.5 236 49.2
TPR.G16818 Trifolium pratense HOM05D008547 ORTHO05D010515 3.7e-52 209.1 235 48.5
TPR.G12161 Trifolium pratense HOM05D008547 ORTHO05D010515 5.7e-45 185.3 244 43.9
Medtr5g012050 Medicago truncatula HOM05D008547 ORTHO05D010515 1.8e-43 180.3 181 49.7
Psat4g161480 Pisum sativum HOM05D008547 ORTHO05D010515 4.2e-40 169.1 237 45.1
Medtr5g090850 Medicago truncatula HOM05D008547 ORTHO05D010515 4.2e-32 142.5 178 46.6
Medtr1g017800 Medicago truncatula HOM05D008547 ORTHO05D010515 2.3e-30 136.7 132 53.8
TPR.G38872 Trifolium pratense HOM05D008547 ORTHO05D010515 8.8e-30 134.8 125 61.6
Psat4g188000 Pisum sativum HOM05D008547 ORTHO05D010515 2.6e-29 133.3 161 44.1
arahy.Tifrunner.gnm1.ann1.72JBMR Arachis hypogaea HOM05D008547 ORTHO05D010515 5.3e-27 125.6 228 33.8
arahy.Tifrunner.gnm1.ann1.MSS51R Arachis hypogaea HOM05D008547 ORTHO05D010515 2.0e-26 123.6 228 33.8
Medtr5g013170 Medicago truncatula HOM05D008547 ORTHO05D010515 1.2e-23 114.4 111 49.5
Psat4g206720 Pisum sativum HOM05D008547 ORTHO05D010515 1.6e-23 114.0 94 56.4
Lj2g0004475 Lotus japonicus HOM05D008547 ORTHO05D010515 2.3e-22 110.2 230 30.9
TPR.G7992 Trifolium pratense HOM05D008547 ORTHO05D010515 8.3e-20 101.7 126 43.7
Medtr8g027530 Medicago truncatula HOM05D008547 ORTHO05D010515 3.2e-16 89.7 95 51.6
Medtr3g023820 Medicago truncatula HOM05D008547 ORTHO05D010515 3.0e-14 83.2 71 59.2
Medtr1g103170 Medicago truncatula HOM05D008547 ORTHO05D010515 6.3e-12 75.5 70 54.3
Medtr8g027560 Medicago truncatula HOM05D008547 ORTHO05D010515 2.7e-10 70.1 81 50.6
TPR.G21157 Trifolium pratense HOM05D008547 ORTHO05D010515 2.1e-07 60.5 49 63.3


User provided reference genes

Program Settings