Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 3.8e-71 271.6 153 100.0
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 4.8e-58 228.0 151 88.1
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 4.7e-45 184.9 117 81.2
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 5.7e-43 177.9 149 72.5
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 6.3e-42 174.5 153 73.2
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 1.4e-41 173.3 108 83.3
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 2.0e-40 169.5 109 79.8
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 2.7e-40 169.1 108 81.5
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 1.7e-39 166.4 114 74.6
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 1.7e-39 166.4 107 82.2
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 2.9e-39 165.6 119 73.9
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 8.6e-39 164.1 110 74.5
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 9.5e-38 160.6 128 68.8
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 9.5e-38 160.6 108 74.1
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 2.8e-37 159.1 109 77.1
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 8.0e-37 157.5 122 68.9
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 8.0e-37 157.5 122 68.9
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 1.0e-36 157.1 103 75.7
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 1.0e-36 157.1 109 71.6
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.8e-36 156.4 122 68.9
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 6.8e-36 154.5 115 71.3
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 6.8e-36 154.5 121 64.5
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 1.2e-35 153.7 150 65.3
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 4.4e-35 151.8 152 63.8
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 5.7e-35 151.4 114 69.3
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 9.8e-35 150.6 108 68.5
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 9.8e-35 150.6 113 69.0
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.3e-34 150.2 111 71.2
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.3e-34 150.2 111 71.2
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 1.3e-34 150.2 111 68.5
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 1.3e-34 150.2 109 71.6
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 1.3e-34 150.2 108 66.7
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 1.7e-34 149.8 151 56.3
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 2.9e-34 149.1 109 67.0
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 8.3e-34 147.5 114 68.4
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 8.3e-34 147.5 118 64.4
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 1.1e-33 147.1 120 63.3
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 1.1e-33 147.1 108 65.7
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 1.4e-33 146.7 109 69.7
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 2.4e-33 146.0 109 67.9
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 2.4e-33 146.0 121 65.3
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 3.2e-33 145.6 114 64.9
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 4.1e-33 145.2 108 68.5
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 4.1e-33 145.2 109 67.9
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 5.4e-33 144.8 119 63.9
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 5.4e-33 144.8 108 68.5
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 5.4e-33 144.8 108 64.8
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 1.2e-32 143.7 109 67.0
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 1.6e-32 143.3 108 67.6
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 2.0e-32 142.9 108 68.5
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 2.7e-32 142.5 109 66.1
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 2.7e-32 142.5 109 66.1
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 2.7e-32 142.5 108 69.4
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 3.5e-32 142.1 108 67.6
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 4.6e-32 141.7 108 67.6
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 5.9e-32 141.4 121 62.0
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 5.9e-32 141.4 121 62.0
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 7.8e-32 141.0 121 63.6
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 7.8e-32 141.0 116 62.9
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 1.0e-31 140.6 108 65.7
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 3.0e-31 139.0 112 64.3
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 5.0e-31 138.3 109 65.1
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 6.6e-31 137.9 110 63.6
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 6.6e-31 137.9 105 66.7
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 1.1e-30 137.1 104 67.3
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 1.1e-30 137.1 115 63.5
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 1.5e-30 136.7 108 66.7
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 1.9e-30 136.3 105 66.7
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.9e-30 136.3 105 66.7
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.9e-30 136.3 105 66.7
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 1.9e-30 136.3 101 69.3
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 2.5e-30 136.0 110 62.7
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 4.3e-30 135.2 123 60.2
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 5.6e-30 134.8 110 64.5
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 7.3e-30 134.4 112 64.3
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 7.3e-30 134.4 105 65.7
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 9.5e-30 134.0 102 68.6
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 1.6e-29 133.3 118 62.7
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 2.1e-29 132.9 107 64.5
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 8.0e-29 131.0 109 63.3
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 1.0e-28 130.6 109 64.2
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 1.4e-28 130.2 115 58.3
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 1.8e-28 129.8 129 57.4
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 2.3e-28 129.4 109 62.4
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 3.1e-28 129.0 111 64.9
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 5.2e-28 128.3 113 61.9
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 5.2e-28 128.3 107 65.4
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 5.2e-28 128.3 107 65.4
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 6.8e-28 127.9 104 68.3
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 1.2e-27 127.1 121 57.9
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 3.4e-27 125.6 81 76.5
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 5.8e-27 124.8 92 65.2
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 9.8e-27 124.0 105 63.8
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 1.3e-26 123.6 81 75.3
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 2.2e-26 122.9 85 71.8
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 8.3e-26 120.9 127 53.5
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.4e-25 119.4 84 72.6
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 5.4e-25 118.2 114 57.0
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 4.6e-24 115.2 114 57.0
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 6.0e-24 114.8 117 59.0
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 3.9e-23 112.1 129 49.6
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 5.0e-23 111.7 125 53.6
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 1.9e-22 109.8 124 50.8
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 3.3e-22 109.0 85 67.1
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 1.2e-21 107.1 113 51.3
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 8.1e-21 104.4 81 71.6
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 2.3e-20 102.8 79 65.8
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.0e-19 99.8 121 52.1
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 1.9e-17 93.2 76 68.4
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.7e-15 86.7 108 50.9
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 6.6e-15 84.7 87 51.7
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 8.6e-15 84.3 54 74.1
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 1.5e-14 83.6 63 68.3
BcaB08g36664 Brassica carinata HOM05D006881 ORTHO05D008423 4.7e-13 78.6 108 44.4
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 4.4e-11 72.0 85 48.2
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 7.6e-11 71.2 42 78.6
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 1.3e-10 70.5 95 43.2
Nitab4.5_0000784g0080 Nicotiana tabacum HOM05D006881 ORTHO05D008423 7.1e-09 64.7 115 39.1


User provided reference genes

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