Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23629 Trifolium pratense HOM05D001128 ORTHO05D000721 2.3e-207 725.3 366 100.0
Medtr4g064947 Medicago truncatula HOM05D001128 ORTHO05D000721 4.5e-118 428.7 346 69.9
Psat7g211520 Pisum sativum HOM05D001128 ORTHO05D000721 4.3e-97 359.0 352 61.9
Ca_29561_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 8.8e-82 308.1 343 55.4
Ca_20607_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 9.8e-65 251.5 252 57.1
Lj3g0022973 Lotus japonicus HOM05D001128 ORTHO05D000721 1.8e-50 204.1 359 45.7
Glyma.12G058400 Glycine max HOM05D001128 ORTHO05D000721 4.9e-48 196.1 327 48.0
Glyma.11G134800 Glycine max HOM05D001128 ORTHO05D000721 2.0e-46 190.7 349 44.1
VMungo1127G1603 Vigna mungo HOM05D001128 ORTHO05D000721 1.7e-37 161.0 333 42.0
Lalb_Chr19g0138041 Lupinus albus HOM05D001128 ORTHO05D000721 2.3e-34 150.6 238 45.0
Lalb_Chr14g0372071 Lupinus albus HOM05D001128 ORTHO05D000721 2.0e-25 120.9 343 35.9
Glyma.13G339500 Glycine max HOM05D001128 ORTHO05D000721 6.4e-24 115.9 275 37.8
Phvul.L008643 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 9.2e-23 112.1 163 46.6
Lalb_Chr24g0397131 Lupinus albus HOM05D001128 ORTHO05D000721 6.0e-22 109.4 178 42.1
TPR.G6832 Trifolium pratense HOM05D001128 ORTHO05D000721 3.0e-21 107.1 284 36.3
arahy.Tifrunner.gnm1.ann1.BMML80 Arachis hypogaea HOM05D001128 ORTHO05D000721 1.1e-20 105.1 230 39.1
Ca_01300_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 8.1e-19 99.0 287 34.5
VMungo1080G0292 Vigna mungo HOM05D001128 ORTHO05D000721 8.1e-19 99.0 204 41.2
Medtr2g097800 Medicago truncatula HOM05D001128 ORTHO05D000721 1.8e-18 97.8 309 34.6
Glyma.15G034900 Glycine max HOM05D001128 ORTHO05D000721 2.4e-18 97.4 204 36.3
arahy.Tifrunner.gnm1.ann1.E0Q1QR Arachis hypogaea HOM05D001128 ORTHO05D000721 6.9e-18 95.9 284 34.9
arahy.Tifrunner.gnm1.ann1.74AGPN Arachis hypogaea HOM05D001128 ORTHO05D000721 1.2e-17 95.1 289 34.6
arahy.Tifrunner.gnm1.ann1.N2YSCM Arachis hypogaea HOM05D001128 ORTHO05D000721 3.4e-17 93.6 289 34.6
Cfa011590 Carpinus fangiana HOM05D001128 ORTHO05D000721 4.9e-16 89.7 348 32.8
Psat5g286040 Pisum sativum HOM05D001128 ORTHO05D000721 1.9e-15 87.8 268 34.3
Gorai.009G095300 Gossypium raimondii HOM05D001128 ORTHO05D000721 3.5e-14 83.6 338 31.1
Atru.chr3.4033 Acer truncatum HOM05D001128 ORTHO05D000721 4.6e-14 83.2 353 30.6
QL01p028290 Quercus lobata HOM05D001128 ORTHO05D000721 4.6e-14 83.2 214 36.4
Haze_24208 Corylus avellana HOM05D001128 ORTHO05D000721 1.0e-13 82.0 359 31.5
Manes.01G167300 Manihot esculenta HOM05D001128 ORTHO05D000721 3.0e-13 80.5 341 31.4
Gohir.D05G092700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.5e-12 78.2 337 30.9
Thecc.09G311600 Theobroma cacao HOM05D001128 ORTHO05D000721 2.5e-12 77.4 359 29.0
Prupe.6G067000 Prunus persica HOM05D001128 ORTHO05D000721 4.3e-12 76.6 283 32.9
Potri.009G038600 Populus trichocarpa HOM05D001128 ORTHO05D000721 7.3e-12 75.9 359 31.5
Sabra09G0027500 Salix brachista HOM05D001128 ORTHO05D000721 2.1e-11 74.3 366 30.1
MD03G1082700 Malus domestica HOM05D001128 ORTHO05D000721 3.6e-11 73.6 315 30.8
CiPaw.14G063600 Carya illinoinensis HOM05D001128 ORTHO05D000721 8.1e-11 72.4 71 53.5
Gohir.A03G046700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.1e-10 72.0 158 37.3
MBI05_g02674_MAGBIO Magnolia biondii HOM05D001128 ORTHO05D000721 6.9e-10 69.3 250 28.4
Duzib168G0052 Durio zibethinus HOM05D001128 ORTHO05D000721 9.0e-10 68.9 308 30.2
Dinv17068 Davidia involucrata HOM05D001128 ORTHO05D000721 3.4e-09 67.0 310 30.6
Duzib170G1159 Durio zibethinus HOM05D001128 ORTHO05D000721 3.4e-09 67.0 363 28.4
RcHm_v2.0_Chr5g0066981 Rosa chinensis HOM05D001128 ORTHO05D000721 3.4e-09 67.0 291 32.0
Eucgr.J01995 Eucalyptus grandis HOM05D001128 ORTHO05D000721 7.6e-09 65.9 267 27.0
FAN21G1564 Fragaria x ananassa HOM05D001128 ORTHO05D000721 7.6e-09 65.9 291 29.2
Gohir.D03G120500 Gossypium hirsutum HOM05D001128 ORTHO05D000721 7.6e-09 65.9 158 36.1
Gorai.003G127200 Gossypium raimondii HOM05D001128 ORTHO05D000721 7.6e-09 65.9 158 36.1
GSVIVG01024844001 Vitis vinifera HOM05D001128 ORTHO05D000721 7.6e-09 65.9 354 27.4
MD11G1090800 Malus domestica HOM05D001128 ORTHO05D000721 1.7e-08 64.7 274 32.8
vmacro03017 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 1.7e-08 64.7 197 35.5
FAN16G1449 Fragaria x ananassa HOM05D001128 ORTHO05D000721 2.2e-08 64.3 294 30.6
Gohir.A05G091900 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.9e-08 63.9 326 27.0
MSTRG.19049 Avicennia marina HOM05D001128 ORTHO05D000721 3.8e-08 63.5 148 35.1
TAR633G0212 Trochodendron aralioides HOM05D001128 ORTHO05D000721 3.8e-08 63.5 144 32.6
CiPaw.13G086900 Carya illinoinensis HOM05D001128 ORTHO05D000721 4.9e-08 63.2 348 31.0
DCAR_028803 Daucus carota HOM05D001128 ORTHO05D000721 4.9e-08 63.2 240 31.7
Actinidia12878 Actinidia chinensis HOM05D001128 ORTHO05D000721 6.4e-08 62.8 170 31.8
TAR623G0478 Trochodendron aralioides HOM05D001128 ORTHO05D000721 8.4e-08 62.4 282 29.8
Nitab4.5_0000652g0060 Nicotiana tabacum HOM05D001128 ORTHO05D000721 1.4e-07 61.6 238 30.7
FvH4_3g37230 Fragaria vesca HOM05D001128 ORTHO05D000721 1.9e-07 61.2 297 29.6
Peaxi162Scf00009g03319 Petunia axillaris HOM05D001128 ORTHO05D000721 1.9e-07 61.2 80 45.0
Sed0009465 Sechium edule HOM05D021754 ORTHO05D000721 1.9e-07 61.2 94 44.7
GSVIVG01002073001 Vitis vinifera HOM05D001128 ORTHO05D000721 1.9e-07 61.2 74 47.3
Actinidia29161 Actinidia chinensis HOM05D001128 ORTHO05D000721 2.4e-07 60.8 135 35.6
Manes.02G125700 Manihot esculenta HOM05D001128 ORTHO05D000721 2.4e-07 60.8 345 29.9
GSVIVG01038461001 Vitis vinifera HOM05D001128 ORTHO05D000721 3.2e-07 60.5 78 43.6
ECA236G1683 Erigeron canadensis HOM05D001128 ORTHO05D000721 4.2e-07 60.1 93 41.9
MBI14_g02856_MAGBIO Magnolia biondii HOM05D001128 ORTHO05D000721 4.2e-07 60.1 173 32.4
TAR369G0849 Trochodendron aralioides HOM05D001128 ORTHO05D000721 4.2e-07 60.1 81 46.9
GSVIVG01026841001 Vitis vinifera HOM05D001128 ORTHO05D000721 4.2e-07 60.1 78 43.6
C03p13890 Brassica napus HOM05D009319 ORTHO05D000721 5.4e-07 59.7 134 34.3
Dinv37107 Davidia involucrata HOM05D001128 ORTHO05D000721 5.4e-07 59.7 154 33.8
Dinv43012 Davidia involucrata HOM05D001128 ORTHO05D000721 5.4e-07 59.7 310 28.4
Dinv43085 Davidia involucrata HOM05D001128 ORTHO05D000721 5.4e-07 59.7 310 28.4
Sp6g20920 Schrenkiella parvula HOM05D009319 ORTHO05D000721 5.4e-07 59.7 79 44.3
FAN25G3787 Fragaria x ananassa HOM05D001128 ORTHO05D000721 7.1e-07 59.3 297 29.0
THA.LOC104810743 Tarenaya hassleriana HOM05D009319 ORTHO05D000721 7.1e-07 59.3 295 29.2
Rhsim13G0075900 Rhododendron simsii HOM05D001128 ORTHO05D000721 9.3e-07 58.9 299 29.1
GSVIVG01034054001 Vitis vinifera HOM05D001128 ORTHO05D000721 9.3e-07 58.9 163 30.1
Glyma.18G191000 Glycine max HOM05D001128 ORTHO05D000721 1.2e-06 58.5 164 29.3
CSS0027233 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 1.6e-06 58.2 56 57.1
Nn1g00216 Nelumbo nucifera HOM05D001128 ORTHO05D000721 1.6e-06 58.2 81 45.7
Nitab4.5_0000119g0370 Nicotiana tabacum HOM05D001128 ORTHO05D000721 1.6e-06 58.2 178 32.6
BolC3t13836H Brassica oleracea HOM05D009319 ORTHO05D000721 2.1e-06 57.8 88 38.6
Oeu001830.1 Olea europaea HOM05D001128 ORTHO05D000721 2.1e-06 57.8 140 32.9
TWI77G0372 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 2.1e-06 57.8 222 28.8
TAR636G2726 Trochodendron aralioides HOM05D001128 ORTHO05D000721 2.1e-06 57.8 307 29.3
GSVIVG01016431001 Vitis vinifera HOM05D001128 ORTHO05D000721 2.1e-06 57.8 167 32.9
BraA03t10494Z Brassica rapa HOM05D009319 ORTHO05D000721 2.7e-06 57.4 136 34.6
HanXRQChr08g0212731 Helianthus annuus HOM05D001128 ORTHO05D000721 2.7e-06 57.4 65 46.2
TWI79G1361 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 2.7e-06 57.4 62 53.2
GSVIVG01012944001 Vitis vinifera HOM05D001128 ORTHO05D000721 2.7e-06 57.4 93 38.7
A03p11830 Brassica napus HOM05D009319 ORTHO05D000721 3.5e-06 57.0 134 33.6
Peaxi162Scf00481g00624 Petunia axillaris HOM05D001128 ORTHO05D000721 3.5e-06 57.0 80 47.5
PGR119G0644 Punica granatum HOM05D001128 ORTHO05D000721 3.5e-06 57.0 53 58.5
BcaB01g04601 Brassica carinata HOM05D009319 ORTHO05D000721 4.6e-06 56.6 130 35.4
Actinidia13814 Actinidia chinensis HOM05D001128 ORTHO05D000721 6.0e-06 56.2 179 31.3
MSTRG.10240 Avicennia marina HOM05D001128 ORTHO05D000721 6.0e-06 56.2 114 37.7
Oeu018335.1 Olea europaea HOM05D001128 ORTHO05D000721 6.0e-06 56.2 139 32.4
GSVIVG01007626001 Vitis vinifera HOM05D001128 ORTHO05D000721 6.0e-06 56.2 93 38.7
MSTRG.12657 Avicennia marina HOM05D001128 ORTHO05D000721 7.9e-06 55.8 66 45.5
Lsat_1_v5_gn_8_72501 Lactuca sativa HOM05D001128 ORTHO05D000721 7.9e-06 55.8 318 26.1
Prupe.2G243200 Prunus persica HOM05D001128 ORTHO05D000721 7.9e-06 55.8 175 30.9


User provided reference genes

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