Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23509 Trifolium pratense HOM05D005676 ORTHO05D007375 9.2e-87 323.6 166 100.0
TPR.G16793 Trifolium pratense HOM05D005676 ORTHO05D007375 1.4e-50 203.4 120 90.0
Medtr8g027605 Medicago truncatula HOM05D005676 ORTHO05D007375 2.5e-44 182.6 120 80.0
Ca_23531_v3 Cicer arietinum L. HOM05D005676 ORTHO05D007375 3.6e-43 178.7 124 78.2
Psat4g161440 Pisum sativum HOM05D005676 ORTHO05D007375 3.1e-42 175.6 123 74.8
Phvul.010G114600 Phaseolus vulgaris HOM05D005676 ORTHO05D007375 4.6e-38 161.8 123 70.7
Glyma.16G024100 Glycine max HOM05D005676 ORTHO05D007375 1.3e-37 160.2 123 69.9
arahy.Tifrunner.gnm1.ann1.L1WQQA Arachis hypogaea HOM05D005676 ORTHO05D007375 5.1e-37 158.3 115 72.2
arahy.Tifrunner.gnm1.ann1.FH2LCI Arachis hypogaea HOM05D005676 ORTHO05D007375 6.7e-37 157.9 115 72.2
Lalb_Chr17g0342721 Lupinus albus HOM05D005676 ORTHO05D007375 5.6e-36 154.8 123 67.5
Glyma.07G055432 Glycine max HOM05D005676 ORTHO05D007375 7.4e-36 154.5 123 67.5
Lj3g0008614 Lotus japonicus HOM05D005676 ORTHO05D007375 6.2e-35 151.4 115 70.4
VMungo0331G0849 Vigna mungo HOM05D005676 ORTHO05D007375 1.7e-32 143.3 123 65.0
Potri.014G099100 Populus trichocarpa HOM05D005676 ORTHO05D007375 1.4e-23 113.6 132 52.3
Prupe.2G189000 Prunus persica HOM05D005676 ORTHO05D007375 7.1e-23 111.3 127 51.2
Sabra14G0072700 Salix brachista HOM05D005676 ORTHO05D007375 1.2e-22 110.5 121 55.4
Aqoxy7G00081 Aquilegia oxysepala HOM05D005676 ORTHO05D007375 4.6e-22 108.6 124 46.8
Thhalv10005757m.g Eutrema salsugineum HOM05D005676 ORTHO05D007375 4.6e-22 108.6 126 49.2
AL5G44340 Arabidopsis lyrata HOM05D005676 ORTHO05D007375 6.1e-22 108.2 127 47.2
CARHR172110 Cardamine hirsuta HOM05D005676 ORTHO05D007375 6.1e-22 108.2 128 47.7
GSVIVG01027152001 Vitis vinifera HOM05D005676 ORTHO05D007375 6.1e-22 108.2 131 49.6
Sopen01g039730 Solanum pennellii HOM05D005676 ORTHO05D007375 1.0e-21 107.5 127 47.2
Nn1g00247 Nelumbo nucifera HOM05D005676 ORTHO05D007375 1.3e-21 107.1 132 48.5
Peaxi162Scf00786g00018 Petunia axillaris HOM05D005676 ORTHO05D007375 1.3e-21 107.1 127 45.7
QL04p060782 Quercus lobata HOM05D005676 ORTHO05D007375 1.8e-21 106.7 125 50.4
MD01G1081300 Malus domestica HOM05D005676 ORTHO05D007375 3.9e-21 105.5 127 48.0
PGSC0003DMG400000228 Solanum tuberosum HOM05D005676 ORTHO05D007375 3.9e-21 105.5 127 46.5
Dinv32595 Davidia involucrata HOM05D005676 ORTHO05D007375 5.1e-21 105.1 130 45.4
Nitab4.5_0000172g0490 Nicotiana tabacum HOM05D005676 ORTHO05D007375 5.1e-21 105.1 124 46.0
AT3G61780 Arabidopsis thaliana HOM05D005676 ORTHO05D007375 6.7e-21 104.8 127 46.5
CSS0030996 Camellia sinensis var. sinensis HOM05D005676 ORTHO05D007375 1.1e-20 104.0 134 46.3
RcHm_v2.0_Chr1g0359591 Rosa chinensis HOM05D005676 ORTHO05D007375 1.5e-20 103.6 128 50.0
Sp5g01590 Schrenkiella parvula HOM05D005676 ORTHO05D007375 1.5e-20 103.6 125 44.8
CAN.G1415.28 Capsicum annuum HOM05D005676 ORTHO05D007375 1.9e-20 103.2 128 46.9
Aa31LG10G15770 Aethionema arabicum HOM05D005676 ORTHO05D007375 2.5e-20 102.8 128 48.4
PGR031G0643 Punica granatum HOM05D005676 ORTHO05D007375 2.5e-20 102.8 125 48.8
EL10Ac1g00264 Beta vulgaris HOM05D005676 ORTHO05D007375 3.3e-20 102.4 120 45.0
TAR636G2851 Trochodendron aralioides HOM05D005676 ORTHO05D007375 3.3e-20 102.4 135 47.4
AT5G28320 Arabidopsis thaliana HOM05D005676 ORTHO05D007375 4.3e-20 102.1 122 46.7
CiPaw.02G041000 Carya illinoinensis HOM05D005676 ORTHO05D007375 4.3e-20 102.1 133 48.9
Sc01g0002640 Simmondsia chinensis HOM05D005676 ORTHO05D007375 4.3e-20 102.1 132 47.7
Cc02_g39430 Coffea canephora HOM05D005676 ORTHO05D007375 5.7e-20 101.7 129 49.6
Hma1.2p1_0139F.1_g063260 Hydrangea macrophylla HOM05D005676 ORTHO05D007375 5.7e-20 101.7 125 47.2
Nitab4.5_0013740g0030 Nicotiana tabacum HOM05D005676 ORTHO05D007375 5.7e-20 101.7 124 45.2
Sed0007378 Sechium edule HOM05D005676 ORTHO05D007375 5.7e-20 101.7 128 44.5
Solyc01g096010.4 Solanum lycopersicum HOM05D005676 ORTHO05D007375 5.7e-20 101.7 127 45.7
FAN06G1134 Fragaria x ananassa HOM05D005676 ORTHO05D007375 7.4e-20 101.3 126 47.6
FAN06G4290 Fragaria x ananassa HOM05D005676 ORTHO05D007375 7.4e-20 101.3 126 47.6
Ciclev10023383m.g Citrus clementina HOM05D005676 ORTHO05D007375 9.7e-20 100.9 130 46.9
Lj9A598G65 Lonicera japonica HOM05D005676 ORTHO05D007375 9.7e-20 100.9 117 48.7
Manes.01G246200 Manihot esculenta HOM05D005676 ORTHO05D007375 9.7e-20 100.9 130 50.0
SalBow3G4648 Salvia bowleyana HOM05D005676 ORTHO05D007375 9.7e-20 100.9 133 47.4
Ah.05g179510 Amaranthus hybridus HOM05D005676 ORTHO05D007375 1.3e-19 100.5 121 47.1
MSTRG.17345 Avicennia marina HOM05D005676 ORTHO05D007375 1.3e-19 100.5 134 46.3
Carub.0005s2852 Capsella rubella HOM05D005676 ORTHO05D007375 1.6e-19 100.1 130 45.4
ClCG05G000790 Citrullus lanatus HOM05D005676 ORTHO05D007375 2.8e-19 99.4 128 43.8
Migut.B01876 Erythranthe guttata HOM05D005676 ORTHO05D007375 2.8e-19 99.4 137 43.8
SGA_v2.0_scaffold5G03020 Striga asiatica HOM05D005676 ORTHO05D007375 2.8e-19 99.4 123 48.0
FvH4_7g16470 Fragaria vesca HOM05D005676 ORTHO05D007375 3.7e-19 99.0 126 46.8
Oeu043238.1 Olea europaea HOM05D005676 ORTHO05D007375 3.7e-19 99.0 134 47.8
Actinidia10141 Actinidia chinensis HOM05D005676 ORTHO05D007375 4.8e-19 98.6 131 47.3
COL.COLO4_06282 Corchorus olitorius HOM05D005676 ORTHO05D007375 4.8e-19 98.6 131 47.3
FAN03G1248 Fragaria x ananassa HOM05D005676 ORTHO05D007375 4.8e-19 98.6 125 48.8
CsaV3_3G008030 Cucumis sativus L. HOM05D005676 ORTHO05D007375 8.2e-19 97.8 124 45.2
Duzib268G0021 Durio zibethinus HOM05D005676 ORTHO05D007375 1.1e-18 97.4 133 45.9
FAN10G1066 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.1e-18 97.4 125 48.8
BcaC08g45164 Brassica carinata HOM05D005676 ORTHO05D007375 1.4e-18 97.1 129 45.0
A07p25740 Brassica napus HOM05D005676 ORTHO05D007375 1.4e-18 97.1 129 47.3
BraA07t30214Z Brassica rapa HOM05D005676 ORTHO05D007375 1.4e-18 97.1 129 47.3
FAN10G0710 Fragaria x ananassa HOM05D005676 ORTHO05D007375 1.4e-18 97.1 125 48.8
CDE02G4093 Ceratophyllum demersum HOM05D005676 ORTHO05D007375 1.8e-18 96.7 126 46.0
AUR62023455 Chenopodium quinoa HOM05D005676 ORTHO05D007375 1.8e-18 96.7 120 46.7
Gorai.007G108400 Gossypium raimondii HOM05D005676 ORTHO05D007375 1.8e-18 96.7 134 45.5
AT5G28400 Arabidopsis thaliana HOM05D005676 ORTHO05D007375 2.4e-18 96.3 118 46.6
Cfa003798 Carpinus fangiana HOM05D005676 ORTHO05D007375 2.4e-18 96.3 119 51.3
AUR62004498 Chenopodium quinoa HOM05D005676 ORTHO05D007375 2.4e-18 96.3 120 46.7
THA.LOC104817362 Tarenaya hassleriana HOM05D005676 ORTHO05D007375 4.1e-18 95.5 125 43.2
BcaC08g45161 Brassica carinata HOM05D005676 ORTHO05D007375 5.3e-18 95.1 128 46.1
C06p27960 Brassica napus HOM05D005676 ORTHO05D007375 5.3e-18 95.1 128 46.1
Gohir.A11G096900 Gossypium hirsutum HOM05D005676 ORTHO05D007375 6.9e-18 94.7 134 44.8
MBI06_g46583_MAGBIO Magnolia biondii HOM05D005676 ORTHO05D007375 1.2e-17 94.0 133 44.4
Thecc.01G342000 Theobroma cacao HOM05D005676 ORTHO05D007375 1.2e-17 94.0 123 48.0
DCAR_005392 Daucus carota HOM05D005676 ORTHO05D007375 4.5e-17 92.0 126 41.3
Lsat_1_v5_gn_3_140321 Lactuca sativa HOM05D005676 ORTHO05D007375 5.9e-17 91.7 132 44.7
ATR0602G016 Amborella trichopoda HOM05D005676 ORTHO05D007375 7.7e-17 91.3 131 45.8
MELO3C006021.2 Cucumis melo HOM05D005676 ORTHO05D007375 7.7e-17 91.3 124 42.7
SalBow6G4948 Salvia bowleyana HOM05D005676 ORTHO05D007375 7.7e-17 91.3 125 44.0
BolC6t37957H Brassica oleracea HOM05D005676 ORTHO05D007375 1.0e-16 90.9 128 44.5
Cpa.g.sc96.24 Carica papaya HOM05D005676 ORTHO05D007375 1.0e-16 90.9 137 43.8
Eucgr.D02379 Eucalyptus grandis HOM05D005676 ORTHO05D007375 1.3e-16 90.5 124 46.8
ECA246G1832 Erigeron canadensis HOM05D000467 ORTHO05D000379 5.0e-16 88.6 127 45.7
unitig_899.g14797 Utricularia gibba HOM05D005676 ORTHO05D007375 5.0e-16 88.6 118 45.8
HanXRQChr11g0352981 Helianthus annuus HOM05D005676 ORTHO05D007375 8.5e-16 87.8 125 44.8
Hund16716 Selenicereus undatus HOM05D005676 ORTHO05D007375 7.9e-14 81.3 114 41.2
MD07G1150200 Malus domestica HOM05D005676 ORTHO05D007375 3.0e-13 79.3 108 45.4
Haze_15661 Corylus avellana HOM05D005676 ORTHO05D007375 4.3e-12 75.5 108 48.1
Atru.chr5.673 Acer truncatum HOM05D005676 ORTHO05D007375 2.0e-09 66.6 112 42.0


User provided reference genes

Program Settings