Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23504 Trifolium pratense HOM05D006977 ORTHO05D008738 4.9e-82 307.8 155 100.0
Psat7g015240 Pisum sativum HOM05D006977 ORTHO05D008738 6.2e-69 264.2 151 88.1
Medtr8g103265 Medicago truncatula HOM05D006977 ORTHO05D008738 4.9e-66 254.6 151 86.8
Ca_17328_v3 Cicer arietinum L. HOM05D006977 ORTHO05D008738 3.1e-60 235.3 129 91.5
Glyma.04G053700 Glycine max HOM05D006977 ORTHO05D008738 5.6e-54 214.5 145 75.2
Lj5g0006261 Lotus japonicus HOM05D006977 ORTHO05D008738 3.4e-51 205.3 119 85.7
Glyma.10G137900 Glycine max HOM05D006977 ORTHO05D008738 1.0e-47 193.7 126 76.2
Phvul.L002843 Phaseolus vulgaris HOM05D006977 ORTHO05D008738 1.7e-47 193.0 133 72.9
VMungo0720G2811 Vigna mungo HOM05D006977 ORTHO05D008738 5.6e-46 188.0 120 77.5
Lalb_Chr11g0071671 Lupinus albus HOM05D006977 ORTHO05D008738 9.6e-46 187.2 116 81.0
arahy.Tifrunner.gnm1.ann1.KP3I1I Arachis hypogaea HOM05D006977 ORTHO05D008738 3.0e-39 165.6 115 74.8
Dinv12080 Davidia involucrata HOM05D006977 ORTHO05D008738 6.6e-39 164.5 132 64.4
QL05p057365 Quercus lobata HOM05D006977 ORTHO05D008738 1.1e-38 163.7 121 71.1
Haze_05149 Corylus avellana HOM05D006977 ORTHO05D008738 2.5e-38 162.5 118 71.2
Cfa004914 Carpinus fangiana HOM05D006977 ORTHO05D008738 3.3e-38 162.2 118 71.2
Cpa.g.sc112.76 Carica papaya HOM05D006977 ORTHO05D008738 9.6e-38 160.6 118 67.8
TAR362G0624 Trochodendron aralioides HOM05D006977 ORTHO05D008738 9.6e-38 160.6 115 69.6
Sabra14G0082500 Salix brachista HOM05D006977 ORTHO05D008738 1.3e-37 160.2 115 69.6
arahy.Tifrunner.gnm1.ann1.PT1J72 Arachis hypogaea HOM05D006977 ORTHO05D008738 3.6e-37 158.7 109 75.2
Cpa.g.sc57.16 Carica papaya HOM05D006977 ORTHO05D008738 3.1e-36 155.6 118 65.3
MBI19_g30288_MAGBIO Magnolia biondii HOM05D006977 ORTHO05D008738 3.1e-36 155.6 116 70.7
TWI81G0461 Tripterygium wilfordii HOM05D006977 ORTHO05D008738 5.3e-36 154.8 124 63.7
Potri.014G112200 Populus trichocarpa HOM05D006977 ORTHO05D008738 6.9e-36 154.5 111 71.2
Thecc.01G325400 Theobroma cacao HOM05D006977 ORTHO05D008738 1.2e-35 153.7 115 67.8
GSVIVG01028248001 Vitis vinifera HOM05D006977 ORTHO05D008738 1.2e-35 153.7 135 63.0
Manes.05G008900 Manihot esculenta HOM05D006977 ORTHO05D008738 4.5e-35 151.8 118 65.3
Prupe.3G002600 Prunus persica HOM05D006977 ORTHO05D008738 4.5e-35 151.8 142 56.3
Nn4g24845 Nelumbo nucifera HOM05D006977 ORTHO05D008738 9.9e-35 150.6 116 67.2
CSS0050251 Camellia sinensis var. sinensis HOM05D006977 ORTHO05D008738 1.7e-34 149.8 119 63.9
Actinidia25872 Actinidia chinensis HOM05D006977 ORTHO05D008738 2.2e-34 149.4 115 67.0
CiPaw.08G082500 Carya illinoinensis HOM05D006977 ORTHO05D008738 1.1e-33 147.1 117 63.2
Atru.chr5.861 Acer truncatum HOM05D006977 ORTHO05D008738 1.9e-33 146.4 125 61.6
PSO357G0421 Papaver somniferum HOM05D006977 ORTHO05D008738 2.4e-33 146.0 116 66.4
MSTRG.6995 Avicennia marina HOM05D006977 ORTHO05D008738 3.2e-33 145.6 119 62.2
Migut.M01655 Erythranthe guttata HOM05D006977 ORTHO05D008738 4.2e-33 145.2 118 63.6
Eucgr.A01003 Eucalyptus grandis HOM05D006977 ORTHO05D008738 4.2e-33 145.2 115 63.5
Ciclev10022352m.g Citrus clementina HOM05D006977 ORTHO05D008738 7.1e-33 144.4 118 61.9
Aqoxy5G02822 Aquilegia oxysepala HOM05D006977 ORTHO05D008738 9.3e-33 144.1 116 62.9
Hma1.2p1_0484F.1_g162990 Hydrangea macrophylla HOM05D006977 ORTHO05D008738 1.2e-32 143.7 128 61.7
PSO170G4516 Papaver somniferum HOM05D006977 ORTHO05D008738 1.2e-32 143.7 115 63.5
Cc04_g01560 Coffea canephora HOM05D006977 ORTHO05D008738 2.1e-32 142.9 117 63.2
COL.COLO4_23128 Corchorus olitorius HOM05D006977 ORTHO05D008738 2.1e-32 142.9 118 63.6
vmacro15094 Vaccinium macrocarpon HOM05D006977 ORTHO05D008738 2.1e-32 142.9 124 62.1
Rhsim01G0293500 Rhododendron simsii HOM05D006977 ORTHO05D008738 2.7e-32 142.5 125 60.0
Duzib133G0680 Durio zibethinus HOM05D006977 ORTHO05D008738 3.5e-32 142.1 118 61.0
Duzib268G1378 Durio zibethinus HOM05D006977 ORTHO05D008738 4.6e-32 141.7 118 60.2
Lj1A7G42 Lonicera japonica HOM05D006977 ORTHO05D008738 6.0e-32 141.4 107 69.2
PGR042G1466 Punica granatum HOM05D006977 ORTHO05D008738 6.0e-32 141.4 118 64.4
ATR0796G043 Amborella trichopoda HOM05D006977 ORTHO05D008738 7.9e-32 141.0 125 62.4
CsaV3_5G018620 Cucumis sativus L. HOM05D006977 ORTHO05D008738 7.9e-32 141.0 116 62.9
Gohir.D11G109500 Gossypium hirsutum HOM05D006977 ORTHO05D008738 1.8e-31 139.8 118 59.3
Gorai.007G117100 Gossypium raimondii HOM05D006977 ORTHO05D008738 1.8e-31 139.8 118 59.3
AUR62007556 Chenopodium quinoa HOM05D006977 ORTHO05D008738 2.3e-31 139.4 116 61.2
AUR62020194 Chenopodium quinoa HOM05D006977 ORTHO05D008738 2.3e-31 139.4 123 57.7
FAN26G0658 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.3e-31 139.4 122 61.5
RcHm_v2.0_Chr3g0485771 Rosa chinensis HOM05D006977 ORTHO05D008738 2.3e-31 139.4 119 63.0
Duzib268G1723 Durio zibethinus HOM05D006977 ORTHO05D008738 3.0e-31 139.0 118 59.3
Duzib268G1823 Durio zibethinus HOM05D006977 ORTHO05D008738 3.0e-31 139.0 118 59.3
FAN23G2129 Fragaria x ananassa HOM05D006977 ORTHO05D008738 3.0e-31 139.0 126 59.5
Hund02455 Selenicereus undatus HOM05D006977 ORTHO05D008738 3.9e-31 138.7 118 58.5
Gohir.A11G104700 Gossypium hirsutum HOM05D006977 ORTHO05D008738 5.1e-31 138.3 118 58.5
HPP92_012764 Vanilla planifolia HOM05D006977 ORTHO05D008738 6.7e-31 137.9 116 57.8
FvH4_1g26230 Fragaria vesca HOM05D006977 ORTHO05D008738 1.5e-30 136.7 126 57.9
FAN19G2776 Fragaria x ananassa HOM05D006977 ORTHO05D008738 1.5e-30 136.7 126 57.9
Nitab4.5_0003092g0050 Nicotiana tabacum HOM05D006977 ORTHO05D008738 1.9e-30 136.3 114 62.3
MELO3C005192.2 Cucumis melo HOM05D006977 ORTHO05D008738 4.3e-30 135.2 116 60.3
MD09G1290400 Malus domestica HOM05D006977 ORTHO05D008738 5.6e-30 134.8 120 59.2
Lsat_1_v5_gn_7_107761 Lactuca sativa HOM05D006977 ORTHO05D008738 9.6e-30 134.0 115 60.0
PGSC0003DMG400001120 Solanum tuberosum HOM05D006977 ORTHO05D008738 9.6e-30 134.0 115 60.9
EL10Ac6g15579 Beta vulgaris HOM05D006977 ORTHO05D008738 1.3e-29 133.7 126 57.1
ECA236G2063 Erigeron canadensis HOM05D006977 ORTHO05D008738 1.3e-29 133.7 116 56.9
ClCG01G007180 Citrullus lanatus HOM05D006977 ORTHO05D008738 2.1e-29 132.9 116 59.5
CAN.G100.60 Capsicum annuum HOM05D006977 ORTHO05D008738 2.8e-29 132.5 111 60.4
FAN28G2841 Fragaria x ananassa HOM05D006977 ORTHO05D008738 2.8e-29 132.5 122 58.2
Peaxi162Scf00309g00082 Petunia axillaris HOM05D006977 ORTHO05D008738 2.8e-29 132.5 119 58.8
Solyc01g080830.3 Solanum lycopersicum HOM05D006977 ORTHO05D008738 8.1e-29 131.0 115 59.1
Sed0019401 Sechium edule HOM05D006977 ORTHO05D008738 1.1e-28 130.6 116 56.9
Sopen01g030650 Solanum pennellii HOM05D006977 ORTHO05D008738 1.1e-28 130.6 115 59.1
Zm00001eb328690 Zea mays HOM05D006977 ORTHO05D008738 4.0e-28 128.6 119 53.8
Sc02g0004000 Simmondsia chinensis HOM05D006977 ORTHO05D008738 5.3e-28 128.3 128 53.1
unitig_8.g4039 Utricularia gibba HOM05D006977 ORTHO05D008738 1.2e-27 127.1 125 54.4
DCAR_012297 Daucus carota HOM05D006977 ORTHO05D008738 1.5e-27 126.7 115 56.5
THA.LOC104799825 Tarenaya hassleriana HOM05D006977 ORTHO05D008738 1.5e-27 126.7 119 53.8
Aa31LG5G1570 Aethionema arabicum HOM05D006977 ORTHO05D008738 2.0e-27 126.3 115 54.8
CiPaw.07G125600 Carya illinoinensis HOM05D006977 ORTHO05D008738 3.4e-27 125.6 136 52.9
HanXRQChr15g0493961 Helianthus annuus HOM05D006977 ORTHO05D008738 3.4e-27 125.6 117 56.4
Oeu031543.1 Olea europaea HOM05D006977 ORTHO05D008738 1.0e-26 124.0 122 59.8
Nitab4.5_0000222g0410 Nicotiana tabacum HOM05D006977 ORTHO05D008738 2.9e-26 122.5 108 59.3
Os07g0636400 Oryza sativa ssp. japonica HOM05D006977 ORTHO05D008738 6.5e-26 121.3 119 49.6
AL6G51510 Arabidopsis lyrata HOM05D006977 ORTHO05D008738 8.4e-26 120.9 119 48.7
AT4G01790 Arabidopsis thaliana HOM05D006977 ORTHO05D008738 1.1e-25 120.6 119 49.6
Sp3g31270 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.4e-25 120.2 119 49.6
SpUn0082_0020 Schrenkiella parvula HOM05D006977 ORTHO05D008738 1.4e-25 120.2 119 49.6
CARHR249760 Cardamine hirsuta HOM05D006977 ORTHO05D008738 1.9e-25 119.8 115 52.2
Thhalv10029024m.g Eutrema salsugineum HOM05D006977 ORTHO05D008738 3.2e-25 119.0 119 50.4
Sp6g01640 Schrenkiella parvula HOM05D006977 ORTHO05D008738 3.2e-25 119.0 119 47.9
Carub.0006s3543 Capsella rubella HOM05D006977 ORTHO05D008738 4.2e-25 118.6 115 51.3
BcaC01g06803 Brassica carinata HOM05D006977 ORTHO05D008738 7.1e-25 117.9 118 48.3
BolC3t16121H Brassica oleracea HOM05D006977 ORTHO05D008738 7.1e-25 117.9 118 48.3
C03p38480 Brassica napus HOM05D006977 ORTHO05D008738 1.6e-24 116.7 118 48.3
BcaB01g02378 Brassica carinata HOM05D006977 ORTHO05D008738 2.1e-24 116.3 118 47.5
SalBow5G4120 Salvia bowleyana HOM05D006977 ORTHO05D008738 1.0e-23 114.0 105 59.0
A03p31490 Brassica napus HOM05D006977 ORTHO05D008738 2.3e-23 112.8 118 46.6
BraA03t12329Z Brassica rapa HOM05D006977 ORTHO05D008738 2.3e-23 112.8 118 46.6
CANSAT25G0488 Cannabis sativa HOM05D006977 ORTHO05D008738 5.1e-23 111.7 101 60.4
SGA_v2.0_scaffold204G41642 Striga asiatica HOM05D006977 ORTHO05D008738 2.5e-22 109.4 122 50.8
CDE02G1393 Ceratophyllum demersum HOM05D006977 ORTHO05D008738 4.3e-22 108.6 97 55.7
MD17G1285100 Malus domestica HOM05D006977 ORTHO05D008738 2.1e-21 106.3 80 62.5
Pp3c20_22530 Physcomitrium patens HOM05D006977 ORTHO05D008738 5.9e-11 71.6 130 39.2
Mapoly0147s0029 Marchantia polymorpha HOM05D006977 ORTHO05D008738 3.8e-10 68.9 124 33.1


User provided reference genes

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