Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23455 Trifolium pratense HOM05D003954 ORTHO05D004627 1.9e-98 362.5 181 100.0
Ca_17364_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 2.3e-67 259.2 132 92.4
Medtr8g102500 Medicago truncatula HOM05D003954 ORTHO05D004627 2.6e-66 255.8 134 90.3
Glyma.08G033600 Glycine max HOM05D003954 ORTHO05D004627 2.0e-63 246.1 134 85.1
Lj4g0018527 Lotus japonicus HOM05D003954 ORTHO05D004627 2.0e-63 246.1 134 87.3
Lalb_Chr09g0331531 Lupinus albus HOM05D003954 ORTHO05D004627 4.5e-63 245.0 131 87.8
Lalb_Chr05g0223231 Lupinus albus HOM05D003954 ORTHO05D004627 5.0e-62 241.5 132 84.1
Phvul.002G308700 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 5.0e-62 241.5 134 82.8
VMungo0251G2014 Vigna mungo HOM05D003954 ORTHO05D004627 1.5e-61 240.0 134 82.1
Glyma.05G226800 Glycine max HOM05D003954 ORTHO05D004627 3.2e-61 238.8 134 82.8
Cpa.g.sc40.95 Carica papaya HOM05D003954 ORTHO05D004627 1.6e-60 236.5 132 81.1
THA.LOC104814571 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 4.7e-60 235.0 132 81.8
TWI34G0439 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 4.7e-60 235.0 132 81.8
Cfa003181 Carpinus fangiana HOM05D003954 ORTHO05D004627 6.1e-60 234.6 132 82.6
PGR102G1739 Punica granatum HOM05D003954 ORTHO05D004627 8.0e-60 234.2 132 79.5
Thecc.09G100700 Theobroma cacao HOM05D003954 ORTHO05D004627 1.0e-59 233.8 132 81.8
Duzib168G1367 Durio zibethinus HOM05D003954 ORTHO05D004627 2.3e-59 232.6 131 81.7
Sabra18G0076000 Salix brachista HOM05D003954 ORTHO05D004627 1.2e-58 230.3 132 78.0
Thhalv10001962m.g Eutrema salsugineum HOM05D003954 ORTHO05D004627 2.6e-58 229.2 132 79.5
Potri.006G164864 Populus trichocarpa HOM05D003954 ORTHO05D004627 2.6e-58 229.2 128 81.2
Potri.018G087700 Populus trichocarpa HOM05D003954 ORTHO05D004627 3.3e-58 228.8 132 77.3
Gohir.D06G065800 Gossypium hirsutum HOM05D003954 ORTHO05D004627 4.4e-58 228.4 130 81.5
Manes.16G108600 Manihot esculenta HOM05D003954 ORTHO05D004627 4.4e-58 228.4 131 80.2
Sp3g33220 Schrenkiella parvula HOM05D003954 ORTHO05D004627 4.4e-58 228.4 132 78.8
AUR62021404 Chenopodium quinoa HOM05D003954 ORTHO05D004627 7.5e-58 227.6 131 77.9
BcaC06g36652 Brassica carinata HOM05D003954 ORTHO05D004627 9.7e-58 227.3 132 78.8
A07p00800 Brassica napus HOM05D003954 ORTHO05D004627 9.7e-58 227.3 132 78.8
BolC7t40584H Brassica oleracea HOM05D003954 ORTHO05D004627 9.7e-58 227.3 132 78.8
BraA07t27878Z Brassica rapa HOM05D003954 ORTHO05D004627 9.7e-58 227.3 132 78.8
Gohir.A06G067200 Gossypium hirsutum HOM05D003954 ORTHO05D004627 9.7e-58 227.3 130 80.8
BcaB03g16776 Brassica carinata HOM05D003954 ORTHO05D004627 1.7e-57 226.5 132 78.8
BcaB08g34891 Brassica carinata HOM05D003954 ORTHO05D004627 2.2e-57 226.1 132 77.3
BcaC04g22815 Brassica carinata HOM05D003954 ORTHO05D004627 2.2e-57 226.1 134 77.6
C09p15000 Brassica napus HOM05D003954 ORTHO05D004627 2.2e-57 226.1 134 77.6
CiPaw.04G158000 Carya illinoinensis HOM05D003954 ORTHO05D004627 2.2e-57 226.1 132 79.5
Gorai.010G077100 Gossypium raimondii HOM05D003954 ORTHO05D004627 2.2e-57 226.1 130 80.0
Eucgr.C03729 Eucalyptus grandis HOM05D003954 ORTHO05D004627 2.8e-57 225.7 132 79.5
FAN26G2983 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.8e-57 225.7 134 77.6
AUR62010893 Chenopodium quinoa HOM05D003954 ORTHO05D004627 3.7e-57 225.3 131 77.1
Manes.03G027300 Manihot esculenta HOM05D003954 ORTHO05D004627 3.7e-57 225.3 132 78.8
Ciclev10008006m.g Citrus clementina HOM05D003954 ORTHO05D004627 4.8e-57 224.9 131 77.9
Gohir.A05G025900 Gossypium hirsutum HOM05D003954 ORTHO05D004627 4.8e-57 224.9 132 76.5
BolC9t54402H Brassica oleracea HOM05D003954 ORTHO05D004627 6.3e-57 224.6 134 76.9
BraA09t36909Z Brassica rapa HOM05D003954 ORTHO05D004627 6.3e-57 224.6 134 76.9
CiPaw.03G225300 Carya illinoinensis HOM05D003954 ORTHO05D004627 6.3e-57 224.6 134 77.6
CANSAT56G2004 Cannabis sativa HOM05D003954 ORTHO05D004627 8.3e-57 224.2 133 75.2
Dinv41667 Davidia involucrata HOM05D003954 ORTHO05D004627 8.3e-57 224.2 132 78.0
FAN23G0884 Fragaria x ananassa HOM05D003954 ORTHO05D004627 8.3e-57 224.2 134 76.9
FAN28G0221 Fragaria x ananassa HOM05D003954 ORTHO05D004627 8.3e-57 224.2 134 76.9
Hma1.2p1_0571F.1_g180650 Hydrangea macrophylla HOM05D003954 ORTHO05D004627 8.3e-57 224.2 132 77.3
AT2G19880 Arabidopsis thaliana HOM05D003954 ORTHO05D004627 1.1e-56 223.8 132 78.8
A09p59090 Brassica napus HOM05D003954 ORTHO05D004627 1.1e-56 223.8 132 76.5
Carub.0003s3415 Capsella rubella HOM05D003954 ORTHO05D004627 1.1e-56 223.8 132 79.5
MD15G1196500 Malus domestica HOM05D003954 ORTHO05D004627 1.1e-56 223.8 131 76.3
THA.LOC104804008 Tarenaya hassleriana HOM05D003954 ORTHO05D004627 1.1e-56 223.8 131 77.9
BraA09t41292Z Brassica rapa HOM05D003954 ORTHO05D004627 2.4e-56 222.6 132 75.8
CARHR110320 Cardamine hirsuta HOM05D003954 ORTHO05D004627 2.4e-56 222.6 131 76.3
FAN26G2948 Fragaria x ananassa HOM05D003954 ORTHO05D004627 2.4e-56 222.6 134 76.1
BcaC07g41232 Brassica carinata HOM05D003954 ORTHO05D004627 3.1e-56 222.2 132 75.8
C08p42370 Brassica napus HOM05D003954 ORTHO05D004627 3.1e-56 222.2 132 75.8
BolC8t51799H Brassica oleracea HOM05D003954 ORTHO05D004627 3.1e-56 222.2 132 75.8
FvH4_1g06110 Fragaria vesca HOM05D003954 ORTHO05D004627 4.1e-56 221.9 134 76.9
FAN19G1313 Fragaria x ananassa HOM05D003954 ORTHO05D004627 4.1e-56 221.9 134 76.9
Gohir.D05G027400 Gossypium hirsutum HOM05D003954 ORTHO05D004627 4.1e-56 221.9 132 75.8
Gorai.009G027500 Gossypium raimondii HOM05D003954 ORTHO05D004627 4.1e-56 221.9 132 75.8
TAR624G0841 Trochodendron aralioides HOM05D003954 ORTHO05D004627 4.1e-56 221.9 132 78.0
TAR633G1204 Trochodendron aralioides HOM05D003954 ORTHO05D004627 5.3e-56 221.5 132 78.0
Actinidia39784 Actinidia chinensis HOM05D003954 ORTHO05D004627 9.1e-56 220.7 132 75.8
Aa31LG8G16830 Aethionema arabicum HOM05D003954 ORTHO05D004627 9.1e-56 220.7 132 75.0
Sed0027745 Sechium edule HOM05D003954 ORTHO05D004627 9.1e-56 220.7 132 73.5
EL10Ac8g18378 Beta vulgaris HOM05D003954 ORTHO05D004627 1.2e-55 220.3 131 77.1
ECA240G1631 Erigeron canadensis HOM05D003954 ORTHO05D004627 1.2e-55 220.3 131 77.1
QL02p041611 Quercus lobata HOM05D003954 ORTHO05D004627 1.2e-55 220.3 132 75.8
AL3G48340 Arabidopsis lyrata HOM05D003954 ORTHO05D004627 1.6e-55 219.9 132 77.3
GSVIVG01015303001 Vitis vinifera HOM05D003954 ORTHO05D004627 1.6e-55 219.9 132 75.8
Rhsim05G0040200 Rhododendron simsii HOM05D003954 ORTHO05D004627 2.0e-55 219.5 132 75.8
RcHm_v2.0_Chr2g0091861 Rosa chinensis HOM05D003954 ORTHO05D004627 2.0e-55 219.5 131 77.1
Hund09103 Selenicereus undatus HOM05D003954 ORTHO05D004627 2.0e-55 219.5 131 76.3
Actinidia09446 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.5e-55 218.8 132 75.0
Nitab4.5_0000566g0060 Nicotiana tabacum HOM05D003954 ORTHO05D004627 3.5e-55 218.8 132 76.5
Sc08g0008010 Simmondsia chinensis HOM05D003954 ORTHO05D004627 4.5e-55 218.4 133 71.4
Sed0021958 Sechium edule HOM05D003954 ORTHO05D004627 5.9e-55 218.0 134 72.4
Psat1g047360 Pisum sativum HOM05D003954 ORTHO05D004627 7.7e-55 217.6 132 75.0
vmacro10852 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 7.7e-55 217.6 132 74.2
Nn8g39063 Nelumbo nucifera HOM05D003954 ORTHO05D004627 1.0e-54 217.2 132 75.0
Nitab4.5_0005668g0030 Nicotiana tabacum HOM05D003954 ORTHO05D004627 1.0e-54 217.2 132 76.5
vmacro06252 Vaccinium macrocarpon HOM05D003954 ORTHO05D004627 1.0e-54 217.2 132 74.2
CSS0033107 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 1.7e-54 216.5 131 75.6
CSS0001350 Camellia sinensis var. sinensis HOM05D003954 ORTHO05D004627 2.2e-54 216.1 132 73.5
COL.COLO4_34744 Corchorus olitorius HOM05D003954 ORTHO05D004627 2.2e-54 216.1 171 63.2
MELO3C015411.2 Cucumis melo HOM05D003954 ORTHO05D004627 2.2e-54 216.1 134 73.1
Rhsim03G0236700 Rhododendron simsii HOM05D003954 ORTHO05D004627 2.2e-54 216.1 132 75.0
Migut.J01101 Erythranthe guttata HOM05D003954 ORTHO05D004627 2.9e-54 215.7 131 75.6
HanXRQChr11g0321631 Helianthus annuus HOM05D003954 ORTHO05D004627 2.9e-54 215.7 131 73.3
Oeu064178.1 Olea europaea HOM05D003954 ORTHO05D004627 2.9e-54 215.7 132 75.0
Lalb_Chr22g0352551 Lupinus albus HOM05D003954 ORTHO05D004627 3.8e-54 215.3 132 72.7
CsaV3_1G039780 Cucumis sativus L. HOM05D003954 ORTHO05D004627 5.0e-54 214.9 134 72.4
Lj2g0001823 Lotus japonicus HOM05D003954 ORTHO05D004627 5.0e-54 214.9 139 71.2
Solyc12g008490.2 Solanum lycopersicum HOM05D003954 ORTHO05D004627 5.0e-54 214.9 137 75.9
Sopen12g003440 Solanum pennellii HOM05D003954 ORTHO05D004627 5.0e-54 214.9 137 75.9
PGSC0003DMG400000296 Solanum tuberosum HOM05D003954 ORTHO05D004627 5.0e-54 214.9 132 76.5
Sc18g0001490 Simmondsia chinensis HOM05D003954 ORTHO05D004627 6.5e-54 214.5 131 76.3
VMungo0464G1304 Vigna mungo HOM05D003954 ORTHO05D004627 6.5e-54 214.5 132 71.2
MD02G1065600 Malus domestica HOM05D003954 ORTHO05D004627 8.5e-54 214.2 131 74.0
Psat7g016920 Pisum sativum HOM05D003954 ORTHO05D004627 1.1e-53 213.8 108 91.7
Aqoxy7G01403 Aquilegia oxysepala HOM05D003954 ORTHO05D004627 1.9e-53 213.0 132 75.8
CAN.G1241.30 Capsicum annuum HOM05D003954 ORTHO05D004627 1.9e-53 213.0 130 75.4
PSO210G6242 Papaver somniferum HOM05D003954 ORTHO05D004627 2.5e-53 212.6 130 75.4
Actinidia07454 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.2e-53 212.2 132 74.2
SGA_v2.0_scaffold62G21557 Striga asiatica HOM05D003954 ORTHO05D004627 4.2e-53 211.8 131 74.8
Lalb_Chr24g0397311 Lupinus albus HOM05D003954 ORTHO05D004627 5.5e-53 211.5 132 73.5
Medtr6g088695 Medicago truncatula HOM05D003954 ORTHO05D004627 5.5e-53 211.5 132 70.5
Peaxi162Scf00665g00340 Petunia axillaris HOM05D003954 ORTHO05D004627 7.2e-53 211.1 130 75.4
HanXRQChr09g0238881 Helianthus annuus HOM05D003954 ORTHO05D004627 9.4e-53 210.7 131 71.0
SalBow6G3745 Salvia bowleyana HOM05D003954 ORTHO05D004627 9.4e-53 210.7 133 72.9
Actinidia17525 Actinidia chinensis HOM05D003954 ORTHO05D004627 1.2e-52 210.3 132 72.0
Phvul.004G176200 Phaseolus vulgaris HOM05D003954 ORTHO05D004627 1.2e-52 210.3 132 72.0
PSO210G3120 Papaver somniferum HOM05D003954 ORTHO05D004627 2.1e-52 209.5 130 74.6
Migut.K00540 Erythranthe guttata HOM05D003954 ORTHO05D004627 4.7e-52 208.4 132 69.7
arahy.Tifrunner.gnm1.ann1.UV3YSF Arachis hypogaea HOM05D003954 ORTHO05D004627 1.0e-51 207.2 108 88.9
Cc06_g10470 Coffea canephora HOM05D003954 ORTHO05D004627 3.0e-51 205.7 134 69.4
PSO832G3271 Papaver somniferum HOM05D003954 ORTHO05D004627 3.0e-51 205.7 130 71.5
arahy.Tifrunner.gnm1.ann1.1X3G68 Arachis hypogaea HOM05D003954 ORTHO05D004627 4.0e-51 205.3 130 71.5
arahy.Tifrunner.gnm1.ann1.KIU7DS Arachis hypogaea HOM05D003954 ORTHO05D004627 4.0e-51 205.3 130 71.5
MSTRG.19554 Avicennia marina HOM05D003954 ORTHO05D004627 4.0e-51 205.3 131 72.5
PSO063G1218 Papaver somniferum HOM05D003954 ORTHO05D004627 4.0e-51 205.3 130 71.5
CDE07G1077 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 2.0e-50 203.0 132 68.9
Glyma.01G007900 Glycine max HOM05D003954 ORTHO05D004627 2.6e-50 202.6 132 66.7
MBI01_g10128_MAGBIO Magnolia biondii HOM05D003954 ORTHO05D004627 5.7e-50 201.4 131 70.2
Lsat_1_v5_gn_7_39841 Lactuca sativa HOM05D003954 ORTHO05D004627 4.8e-49 198.4 131 71.0
Glyma.16G078400 Glycine max HOM05D003954 ORTHO05D004627 6.3e-49 198.0 131 67.2
ATR0681G291 Amborella trichopoda HOM05D003954 ORTHO05D004627 4.1e-48 195.3 131 69.5
SGA_v2.0_scaffold19G08753 Striga asiatica HOM05D003954 ORTHO05D004627 9.1e-48 194.1 142 64.1
HPP92_001552 Vanilla planifolia HOM05D003954 ORTHO05D004627 1.2e-47 193.7 132 67.4
CDE04G2595 Ceratophyllum demersum HOM05D003954 ORTHO05D004627 2.7e-47 192.6 131 65.6
Lj7A665G29 Lonicera japonica HOM05D003954 ORTHO05D004627 2.7e-47 192.6 110 78.2
Zm00001eb365210 Zea mays HOM05D003954 ORTHO05D004627 5.9e-47 191.4 132 68.2
unitig_578.g15920 Utricularia gibba HOM05D003954 ORTHO05D004627 1.3e-46 190.3 131 68.7
DCAR_028664 Daucus carota HOM05D003954 ORTHO05D004627 2.9e-46 189.1 109 78.0
SEGI_27682 Sequoiadendron giganteum HOM05D003954 ORTHO05D004627 4.7e-44 181.8 130 63.8
Lsat_1_v5_gn_5_144920 Lactuca sativa HOM05D003954 ORTHO05D004627 4.4e-42 175.3 107 71.0
Duzib187G1161 Durio zibethinus HOM05D003954 ORTHO05D004627 3.7e-41 172.2 100 77.0
SHI02691 Sapria himalayana HOM05D003954 ORTHO05D004627 1.1e-40 170.6 169 50.3
TWI32G1148 Tripterygium wilfordii HOM05D003954 ORTHO05D004627 2.0e-39 166.4 132 62.9
AagrBONN_evm.TU.Sc2ySwM_228.2751 Anthoceros agrestis HOM05D003954 ORTHO05D004627 2.9e-38 162.5 131 60.3
Atru.chr7.1463 Acer truncatum HOM05D003954 ORTHO05D004627 1.1e-37 160.6 82 86.6
arahy.Tifrunner.gnm1.ann1.LVXR97 Arachis hypogaea HOM05D003954 ORTHO05D004627 4.3e-37 158.7 82 87.8
Pp3c16_7990 Physcomitrium patens HOM05D003954 ORTHO05D004627 4.7e-36 155.2 131 55.7
TPR.G21381 Trifolium pratense HOM05D003954 ORTHO05D004627 1.8e-35 153.3 90 72.2
SMO367G0175 Selaginella moellendorffii HOM05D003954 ORTHO05D004627 4.0e-35 152.1 108 65.7
Ah.14g083230 Amaranthus hybridus HOM05D003954 ORTHO05D004627 5.2e-35 151.8 102 67.6
Oeu053184.3 Olea europaea HOM05D000113 ORTHO05D010194 1.2e-34 150.6 83 77.1
Dinv36687 Davidia involucrata HOM05D003954 ORTHO05D004627 1.5e-34 150.2 83 80.7
Prupe.7G219900 Prunus persica HOM05D003954 ORTHO05D004627 7.5e-34 147.9 83 78.3
Medtr8g102490 Medicago truncatula HOM05D003954 ORTHO05D004627 2.7e-31 139.4 121 63.6
Mapoly0082s0037 Marchantia polymorpha HOM05D003954 ORTHO05D004627 1.6e-28 130.2 130 50.0
Zm00001eb132850 Zea mays HOM05D003954 ORTHO05D004627 1.5e-21 107.1 56 83.9
Ca_25572_v3 Cicer arietinum L. HOM05D003954 ORTHO05D004627 1.2e-18 97.4 48 85.4
MCO02G294 Micromonas commoda HOM05D003954 ORTHO05D004627 2.2e-09 66.6 54 53.7
Actinidia32651 Actinidia chinensis HOM05D003954 ORTHO05D004627 3.2e-08 62.8 42 64.3
Cre09.g409250 Chlamydomonas reinhardtii HOM05D003954 ORTHO05D004627 9.3e-08 61.2 50 52.0
MD01G1180200 Malus domestica HOM05D003954 ORTHO05D004627 1.0e-06 57.8 32 71.9
CAN.G195.50 Capsicum annuum HOM05D003954 ORTHO05D004627 1.3e-06 57.4 44 59.1
TPR.G21382 Trifolium pratense HOM05D003954 ORTHO05D004627 1.7e-06 57.0 50 60.0
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 3.9e-06 55.8 30 83.3


User provided reference genes

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