Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 1.0e-88 330.1 170 100.0
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 4.0e-61 238.4 170 79.4
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 7.3e-55 217.6 157 79.0
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 1.8e-53 213.0 180 68.3
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 1.3e-48 196.8 174 64.9
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 4.7e-46 188.3 183 61.2
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 1.7e-43 179.9 176 61.4
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 8.3e-43 177.6 175 60.0
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 5.4e-42 174.9 172 59.9
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 7.0e-42 174.5 171 62.0
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 1.2e-41 173.7 185 58.4
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 6.6e-40 167.9 143 61.5
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 1.5e-39 166.8 158 60.1
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 1.2e-38 163.7 140 64.3
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 1.2e-38 163.7 114 74.6
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 4.7e-38 161.8 150 60.0
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 1.4e-37 160.2 95 80.0
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 4.0e-37 158.7 97 82.5
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 4.0e-37 158.7 97 82.5
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 5.2e-37 158.3 149 60.4
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 6.8e-37 157.9 118 69.5
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 2.6e-36 156.0 159 59.1
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 2.6e-36 156.0 159 59.1
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 5.8e-36 154.8 164 54.9
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 7.5e-36 154.5 106 76.4
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 7.5e-36 154.5 111 73.0
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 7.5e-36 154.5 161 55.3
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 7.5e-36 154.5 112 69.6
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 9.8e-36 154.1 134 63.4
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 9.8e-36 154.1 162 54.9
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 9.8e-36 154.1 162 54.9
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 1.3e-35 153.7 114 71.9
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 1.7e-35 153.3 106 73.6
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 1.7e-35 153.3 163 52.8
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.7e-35 153.3 162 54.9
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 2.9e-35 152.5 144 56.9
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 2.9e-35 152.5 93 78.5
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 2.9e-35 152.5 106 68.9
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 3.7e-35 152.1 108 72.2
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 6.4e-35 151.4 102 75.5
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 1.4e-34 150.2 147 55.8
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 1.9e-34 149.8 133 60.9
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 2.4e-34 149.4 93 77.4
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 3.2e-34 149.1 141 59.6
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 4.1e-34 148.7 135 62.2
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 4.1e-34 148.7 155 56.1
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 4.1e-34 148.7 120 65.0
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 5.4e-34 148.3 152 58.6
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 1.2e-33 147.1 98 74.5
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 1.6e-33 146.7 152 56.6
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 2.1e-33 146.4 102 72.5
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 2.1e-33 146.4 108 65.7
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 2.1e-33 146.4 156 54.5
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 2.7e-33 146.0 93 75.3
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 2.7e-33 146.0 120 64.2
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 3.5e-33 145.6 107 65.4
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 3.5e-33 145.6 116 68.1
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 4.6e-33 145.2 98 73.5
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 4.6e-33 145.2 140 57.9
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 4.6e-33 145.2 159 53.5
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 6.0e-33 144.8 135 60.0
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 7.8e-33 144.4 98 73.5
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 7.8e-33 144.4 98 73.5
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 7.8e-33 144.4 173 53.8
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 1.0e-32 144.1 137 59.1
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 1.3e-32 143.7 140 57.1
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 1.3e-32 143.7 118 65.3
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 1.3e-32 143.7 140 57.1
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 1.3e-32 143.7 104 66.3
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 1.7e-32 143.3 140 57.1
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 1.7e-32 143.3 160 56.2
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 1.7e-32 143.3 124 62.9
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 2.3e-32 142.9 136 59.6
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 3.0e-32 142.5 138 58.7
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 3.0e-32 142.5 135 59.3
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 3.9e-32 142.1 154 52.6
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 8.6e-32 141.0 110 63.6
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 1.5e-31 140.2 108 64.8
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.5e-31 140.2 94 70.2
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 1.9e-31 139.8 115 67.8
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 4.3e-31 138.7 127 56.7
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 5.6e-31 138.3 116 62.9
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 9.5e-31 137.5 158 50.6
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 4.7e-30 135.2 135 56.3
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 8.1e-30 134.4 133 55.6
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 1.4e-29 133.7 97 67.0
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 2.9e-27 125.9 133 54.9
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 1.1e-26 124.0 139 54.0
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 3.2e-26 122.5 78 74.4
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 3.5e-25 119.0 71 78.9
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 1.5e-23 113.6 144 50.7
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 3.6e-22 109.0 63 82.5
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 8.1e-22 107.8 63 79.4
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.4e-21 106.3 74 73.0
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 2.4e-21 106.3 64 78.1
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 1.5e-20 103.6 131 48.1
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 4.4e-20 102.1 124 48.4
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 6.4e-19 98.2 70 65.7
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 3.2e-18 95.9 58 74.1


User provided reference genes

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