Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 3.6e-205 718.0 358 100.0
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 1.1e-166 590.1 358 83.8
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 1.6e-157 559.7 357 80.1
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 2.3e-143 512.7 346 74.0
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 5.5e-137 491.5 307 77.9
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 2.2e-125 453.0 306 74.2
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 2.6e-123 446.0 354 64.7
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 3.0e-119 432.6 315 65.7
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 6.7e-119 431.4 326 65.0
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 5.7e-118 428.3 269 81.0
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 7.4e-118 427.9 322 64.6
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 1.8e-116 423.3 343 61.5
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 1.8e-116 423.3 327 63.9
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 2.4e-116 422.9 318 64.2
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 2.4e-116 422.9 326 62.6
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 9.1e-116 421.0 319 60.5
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 2.0e-115 419.9 309 66.0
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 2.0e-115 419.9 300 65.3
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 3.5e-115 419.1 339 61.7
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 1.3e-114 417.2 344 59.9
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 5.0e-114 415.2 342 59.6
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 1.9e-113 413.3 321 62.3
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 1.9e-113 413.3 303 66.0
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 4.2e-113 412.1 326 60.4
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 5.5e-113 411.8 303 65.0
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 5.5e-113 411.8 307 64.5
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 7.2e-113 411.4 307 64.8
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 9.4e-113 411.0 299 65.6
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 2.1e-112 409.8 307 64.5
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 2.1e-112 409.8 307 63.8
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 3.6e-112 409.1 349 58.5
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 1.0e-111 407.5 354 60.7
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 5.2e-111 405.2 334 60.2
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 6.7e-111 404.8 308 62.0
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 1.2e-110 404.1 292 65.8
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 1.2e-110 404.1 321 60.4
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 1.2e-110 404.1 301 61.5
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 5.7e-110 401.7 301 63.1
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 9.7e-110 401.0 322 61.2
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 1.3e-109 400.6 307 63.5
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 2.2e-109 399.8 304 61.8
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 2.8e-109 399.4 281 67.6
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 2.8e-109 399.4 333 59.2
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 4.8e-109 398.7 286 67.8
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 4.8e-109 398.7 297 63.0
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 6.3e-109 398.3 315 60.3
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 1.1e-108 397.5 351 57.0
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 1.8e-108 396.7 319 60.2
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 3.1e-108 396.0 326 54.6
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 9.1e-108 394.4 318 61.0
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 1.2e-107 394.0 307 62.2
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.6e-107 393.7 318 60.7
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.6e-107 393.7 300 63.3
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 2.0e-107 393.3 281 67.6
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 2.0e-107 393.3 295 63.4
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 4.5e-107 392.1 331 58.0
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 2.2e-106 389.8 302 57.0
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 2.9e-106 389.4 339 57.2
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.1e-105 387.5 300 62.3
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 6.1e-104 381.7 311 60.5
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 8.0e-104 381.3 351 55.6
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 2.0e-102 376.7 324 58.0
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 7.5e-102 374.8 303 59.1
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 2.2e-101 373.2 279 65.9
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 1.4e-100 370.5 298 56.4
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 1.6e-99 367.1 297 59.6
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 6.5e-98 361.7 307 55.7
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 3.0e-95 352.8 349 54.4
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 3.4e-94 349.4 392 47.7
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 9.8e-94 347.8 301 56.8
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 2.2e-93 346.7 282 57.1
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 3.7e-93 345.9 314 54.1
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 2.4e-92 343.2 305 52.8
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 3.1e-92 342.8 468 42.1
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 1.5e-89 334.0 261 59.0
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 3.6e-88 329.3 239 64.9
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 6.1e-88 328.6 293 53.2
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 9.8e-86 321.2 258 60.9
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 1.7e-85 320.5 304 53.3
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 3.5e-83 312.8 279 53.0
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 6.0e-83 312.0 345 51.0
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 3.3e-81 306.2 234 62.0
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 7.3e-81 305.1 256 56.2
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 4.7e-80 302.4 249 58.2
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 1.5e-78 297.4 235 60.0
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 3.2e-76 289.7 215 64.2
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 1.7e-74 283.9 330 43.0
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 2.5e-73 280.0 330 45.8
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 2.0e-70 270.4 207 61.4
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 1.6e-67 260.8 151 82.8
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 1.3e-66 257.7 200 63.0
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 1.3e-66 257.7 209 60.3
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 1.4e-63 247.7 281 44.1
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 4.9e-61 239.2 314 43.9
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 3.9e-58 229.6 304 39.1
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 1.8e-55 220.7 171 60.8
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 8.7e-50 201.8 202 52.0
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 1.1e-49 201.4 314 41.1
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 5.6e-49 199.1 202 51.5
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 4.8e-48 196.1 143 62.9
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 1.5e-46 191.0 316 37.3
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 1.3e-45 188.0 145 61.4
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 1.9e-44 184.1 245 38.8
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 3.0e-42 176.8 451 32.6
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 4.3e-41 172.9 121 66.9
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 2.4e-39 167.2 104 69.2
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 6.9e-39 165.6 176 51.7
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 8.7e-34 148.7 97 67.0
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 8.4e-29 132.1 84 66.7
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 1.2e-27 128.3 138 55.1
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 1.1e-25 121.7 77 70.1
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 9.7e-25 118.6 76 69.7
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 8.2e-24 115.5 88 59.1
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 5.3e-23 112.8 263 28.9
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 2.0e-22 110.9 334 26.3
RcHm_v2.0_Chr3g0475321 Rosa chinensis HOM05D006689 ORTHO05D008349 3.6e-19 100.1 75 57.3
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 1.4e-18 98.2 292 29.1
Ca_12392_v3 Cicer arietinum L. HOM05D000112 ORTHO05D023238 8.5e-13 79.0 49 87.8
arahy.Tifrunner.gnm1.ann1.HW4B1R Arachis hypogaea HOM05D006689 ORTHO05D008349 2.0e-09 67.8 51 64.7
Hma1.2p1_1624F.1_g294270 Hydrangea macrophylla HOM05D000554 ORTHO05D000860 5.7e-09 66.2 44 63.6
Sabra16G0075600 Salix brachista HOM05D006689 ORTHO05D008349 2.2e-08 64.3 43 62.8
Cfa021542 Carpinus fangiana HOM05D000750 ORTHO05D011662 7.0e-07 59.3 47 61.7
Hund19874 Selenicereus undatus HOM05D006689 ORTHO05D008349 7.7e-06 55.8 40 57.5


User provided reference genes

Program Settings