Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23310 Trifolium pratense HOM05D002916 ORTHO05D003152 3.8e-67 258.1 135 100.0
Medtr7g104680 Medicago truncatula HOM05D002916 ORTHO05D003152 8.9e-48 193.7 135 76.3
Ca_09009_v3 Cicer arietinum L. HOM05D002916 ORTHO05D003152 2.0e-39 166.0 164 61.0
Lj1g0017693 Lotus japonicus HOM05D002916 ORTHO05D003152 5.6e-34 147.9 166 56.0
Glyma.19G194943 Glycine max HOM05D002916 ORTHO05D003152 6.2e-33 144.4 162 56.2
Phvul.001G190500 Phaseolus vulgaris HOM05D002916 ORTHO05D003152 2.4e-29 132.5 162 54.3
VMungo1383G0514 Vigna mungo HOM05D002916 ORTHO05D003152 1.7e-27 126.3 162 51.2
Glyma.03G196300 Glycine max HOM05D002916 ORTHO05D003152 2.5e-26 122.5 165 50.3
Lalb_Chr01g0018131 Lupinus albus HOM05D002916 ORTHO05D003152 6.2e-25 117.9 167 47.9
Glyma.10G072400 Glycine max HOM05D002916 ORTHO05D003152 2.4e-21 105.9 164 43.3
Glyma.13G153800 Glycine max HOM05D002916 ORTHO05D003152 2.4e-21 105.9 162 41.4
Prupe.7G109500 Prunus persica HOM05D002916 ORTHO05D003152 2.1e-20 102.8 165 40.6
Psat0s2641g0080 Pisum sativum HOM05D041958 ORTHO05D003152 1.0e-19 100.5 136 48.5
Duzib128G0442 Durio zibethinus HOM05D002916 ORTHO05D003152 2.3e-19 99.4 163 42.3
FAN02G4366 Fragaria x ananassa HOM05D002916 ORTHO05D003152 1.5e-18 96.7 165 42.4
Rhsim03G0074900 Rhododendron simsii HOM05D002916 ORTHO05D003152 1.5e-18 96.7 171 42.1
RcHm_v2.0_Chr3g0473821 Rosa chinensis HOM05D002916 ORTHO05D003152 1.5e-18 96.7 165 41.8
FvH4_6g18810 Fragaria vesca HOM05D002916 ORTHO05D003152 1.9e-18 96.3 170 41.8
FAN14G1204 Fragaria x ananassa HOM05D002916 ORTHO05D003152 1.9e-18 96.3 170 41.8
MD12G1036700 Malus domestica HOM05D002916 ORTHO05D003152 1.9e-18 96.3 167 38.9
QL05p034193 Quercus lobata HOM05D002916 ORTHO05D003152 3.3e-18 95.5 162 43.2
Manes.08G025700 Manihot esculenta HOM05D002916 ORTHO05D003152 2.8e-17 92.4 165 39.4
Potri.006G213100 Populus trichocarpa HOM05D002916 ORTHO05D003152 3.6e-17 92.0 170 40.6
Potri.016G079700 Populus trichocarpa HOM05D002916 ORTHO05D003152 4.8e-17 91.7 161 41.6
FAN05G4254 Fragaria x ananassa HOM05D002916 ORTHO05D003152 8.1e-17 90.9 165 40.6
FAN05G3486 Fragaria x ananassa HOM05D002916 ORTHO05D003152 1.1e-16 90.5 165 40.6
COL.COLO4_29727 Corchorus olitorius HOM05D002916 ORTHO05D003152 2.4e-16 89.4 166 38.6
Atru.chr8.1530 Acer truncatum HOM05D002916 ORTHO05D003152 9.0e-16 87.4 168 40.5
Thecc.05G089800 Theobroma cacao HOM05D002916 ORTHO05D003152 9.0e-16 87.4 167 38.9
CSS0010688 Camellia sinensis var. sinensis HOM05D002916 ORTHO05D003152 2.6e-15 85.9 106 50.9
Duzib093G0112 Durio zibethinus HOM05D002916 ORTHO05D003152 2.6e-15 85.9 162 41.4
Atru.chr8.1528 Acer truncatum HOM05D002916 ORTHO05D003152 3.4e-15 85.5 169 40.2
Ciclev10013433m.g Citrus clementina HOM05D002916 ORTHO05D003152 3.4e-15 85.5 172 39.0
Sabra16G0087700 Salix brachista HOM05D002916 ORTHO05D003152 3.4e-15 85.5 169 39.1
TWI53G0172 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 5.8e-15 84.7 165 36.4
Sabra16G0085600 Salix brachista HOM05D002916 ORTHO05D003152 1.3e-14 83.6 163 40.5
Dinv31688 Davidia involucrata HOM05D004140 ORTHO05D006116 2.2e-14 82.8 169 37.9
Gohir.D01G195600 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.2e-14 82.8 166 38.6
Gorai.002G239800 Gossypium raimondii HOM05D002916 ORTHO05D003152 2.2e-14 82.8 166 38.6
Nitab4.5_0003610g0010 Nicotiana tabacum HOM05D002916 ORTHO05D003152 4.9e-14 81.6 137 45.3
Gohir.D09G135200 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.4e-13 79.3 170 37.6
Gohir.A07G134900 Gossypium hirsutum HOM05D002916 ORTHO05D003152 5.5e-13 78.2 170 35.9
Gorai.006G155100 Gossypium raimondii HOM05D002916 ORTHO05D003152 7.1e-13 77.8 174 36.2
Haze_16634 Corylus avellana HOM05D002916 ORTHO05D003152 9.3e-13 77.4 163 38.0
Haze_16636 Corylus avellana HOM05D002916 ORTHO05D003152 9.3e-13 77.4 163 38.0
Gohir.D04G099400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 9.3e-13 77.4 168 37.5
Manes.09G055000 Manihot esculenta HOM05D002916 ORTHO05D003152 9.3e-13 77.4 164 34.8
Gohir.A04G062400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.2e-12 77.0 167 38.3
Gorai.009G402300 Gossypium raimondii HOM05D002916 ORTHO05D003152 1.2e-12 77.0 168 37.5
MSTRG.26638 Avicennia marina HOM05D002916 ORTHO05D003152 2.7e-12 75.9 165 33.3
Cpa.g.sc5.15 Carica papaya HOM05D002916 ORTHO05D003152 3.5e-12 75.5 165 38.8
Cfa001906 Carpinus fangiana HOM05D002916 ORTHO05D003152 3.5e-12 75.5 170 37.1
CiPaw.01G252200 Carya illinoinensis HOM05D002916 ORTHO05D003152 3.5e-12 75.5 171 36.8
Actinidia05426 Actinidia chinensis HOM05D002916 ORTHO05D003152 4.6e-12 75.1 168 34.5
Gohir.A01G206200 Gossypium hirsutum HOM05D002916 ORTHO05D003152 4.6e-12 75.1 168 36.9
Nn2g14164 Nelumbo nucifera HOM05D002916 ORTHO05D003152 6.0e-12 74.7 160 35.6
Nn6g34891 Nelumbo nucifera HOM05D002916 ORTHO05D003152 6.0e-12 74.7 155 36.8
Ciclev10012941m.g Citrus clementina HOM05D002916 ORTHO05D003152 7.9e-12 74.3 163 36.2
Oeu056929.1 Olea europaea HOM05D002916 ORTHO05D003152 7.9e-12 74.3 173 35.8
Eucgr.A02661 Eucalyptus grandis HOM05D002916 ORTHO05D003152 1.0e-11 73.9 134 35.1
Gohir.A05G000100 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.3e-11 73.6 170 35.3
Eucgr.K02033 Eucalyptus grandis HOM05D002916 ORTHO05D003152 2.3e-11 72.8 181 33.7
Peaxi162Scf00404g00102 Petunia axillaris HOM05D002916 ORTHO05D003152 2.3e-11 72.8 171 36.8
Gohir.A11G003500 Gossypium hirsutum HOM05D002916 ORTHO05D003152 3.0e-11 72.4 164 34.8
Hma1.2p1_0084F.1_g043850 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 3.0e-11 72.4 145 35.2
Hma1.2p1_0820F.1_g223855 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 3.0e-11 72.4 145 35.2
Oeu047865.1 Olea europaea HOM05D002916 ORTHO05D003152 3.0e-11 72.4 162 37.0
Sabra06G0164100 Salix brachista HOM05D002916 ORTHO05D003152 3.9e-11 72.0 143 41.3
TWI74G0225 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 3.9e-11 72.0 165 33.3
AT3G10120 Arabidopsis thaliana HOM05D002916 ORTHO05D003152 2.5e-10 69.3 178 32.6
Carub.0008s0814 Capsella rubella HOM05D002916 ORTHO05D003152 4.3e-10 68.6 182 31.9
DCAR_009166 Daucus carota HOM05D002916 ORTHO05D003152 4.3e-10 68.6 161 34.8
Gohir.A09G139400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 4.3e-10 68.6 126 37.3
MD14G1023400 Malus domestica HOM05D002916 ORTHO05D003152 7.4e-10 67.8 172 36.6
TAR623G0367 Trochodendron aralioides HOM05D002916 ORTHO05D003152 9.6e-10 67.4 75 50.7
AUR62006186 Chenopodium quinoa HOM05D002916 ORTHO05D003152 1.6e-09 66.6 169 36.7
Aqoxy4G02773 Aquilegia oxysepala HOM05D002916 ORTHO05D003152 2.1e-09 66.2 160 34.4
Sed0018474 Sechium edule HOM05D002916 ORTHO05D003152 2.1e-09 66.2 162 34.0
C05p58000 Brassica napus HOM05D002916 ORTHO05D003152 3.7e-09 65.5 171 31.6
A05p38970 Brassica napus HOM05D002916 ORTHO05D003152 4.8e-09 65.1 174 31.0
BcaNung06240 Brassica carinata HOM05D002916 ORTHO05D003152 8.2e-09 64.3 171 30.4
BolC5t34456H Brassica oleracea HOM05D002916 ORTHO05D003152 8.2e-09 64.3 170 31.2
BraA05t22688Z Brassica rapa HOM05D002916 ORTHO05D003152 8.2e-09 64.3 174 30.5
AUR62028520 Chenopodium quinoa HOM05D002916 ORTHO05D003152 1.1e-08 63.9 169 36.7
Sp3g08400 Schrenkiella parvula HOM05D002916 ORTHO05D003152 1.4e-08 63.5 176 31.2
CsaV3_6G040690 Cucumis sativus L. HOM05D002916 ORTHO05D003152 2.4e-08 62.8 169 33.1
AL6G13470 Arabidopsis lyrata HOM05D002916 ORTHO05D003152 3.1e-08 62.4 182 31.9
DCAR_013389 Daucus carota HOM05D002916 ORTHO05D003152 3.1e-08 62.4 164 32.9
Thhalv10021626m.g Eutrema salsugineum HOM05D002916 ORTHO05D003152 3.1e-08 62.4 184 26.6
Ah.15g090860 Amaranthus hybridus HOM05D002916 ORTHO05D003152 4.0e-08 62.0 161 34.2
DCAR_013392 Daucus carota HOM05D002916 ORTHO05D003152 5.3e-08 61.6 163 31.3
DCAR_007755 Daucus carota HOM05D002916 ORTHO05D003152 1.2e-07 60.5 152 34.2
Migut.L01781 Erythranthe guttata HOM05D002916 ORTHO05D003152 1.2e-07 60.5 169 33.1
CARHR084600 Cardamine hirsuta HOM05D002916 ORTHO05D003152 1.5e-07 60.1 180 30.0
MELO3C024547.2 Cucumis melo HOM05D002916 ORTHO05D003152 1.5e-07 60.1 175 31.4
Nitab4.5_0009023g0020 Nicotiana tabacum HOM05D002916 ORTHO05D003152 2.0e-07 59.7 101 46.5
AL3G21460 Arabidopsis lyrata HOM05D002916 ORTHO05D003152 2.6e-07 59.3 183 29.5
BcaNung05911 Brassica carinata HOM05D002916 ORTHO05D003152 2.6e-07 59.3 183 29.5
ECA236G4089 Erigeron canadensis HOM05D002916 ORTHO05D003152 4.5e-07 58.5 136 35.3
THA.LOC104816397 Tarenaya hassleriana HOM05D002916 ORTHO05D003152 7.6e-07 57.8 190 31.6
Zm00001eb197070 Zea mays HOM05D002916 ORTHO05D003152 7.6e-07 57.8 138 33.3
PGSC0003DMG400008880 Solanum tuberosum HOM05D002916 ORTHO05D003152 1.0e-06 57.4 206 28.2
CANSAT64G0492 Cannabis sativa HOM05D002916 ORTHO05D003152 1.3e-06 57.0 196 32.7
Zm00001eb092670 Zea mays HOM05D002916 ORTHO05D003152 1.3e-06 57.0 136 31.6
DCAR_013390 Daucus carota HOM05D002916 ORTHO05D003152 1.7e-06 56.6 163 31.9
DCAR_013391 Daucus carota HOM05D002916 ORTHO05D003152 2.2e-06 56.2 159 32.1
Lsat_1_v5_gn_8_77181 Lactuca sativa HOM05D002916 ORTHO05D003152 2.2e-06 56.2 134 33.6
Actinidia31270 Actinidia chinensis HOM05D002916 ORTHO05D003152 2.9e-06 55.8 156 32.1
CARHR209370 Cardamine hirsuta HOM05D002916 ORTHO05D003152 3.8e-06 55.5 179 30.2
ClCG04G010060 Citrullus lanatus HOM05D002916 ORTHO05D003152 3.8e-06 55.5 159 31.4
C03p01810 Brassica napus HOM05D002916 ORTHO05D003152 6.5e-06 54.7 180 28.3


User provided reference genes

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