Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23298 Trifolium pratense HOM05D007848 ORTHO05D000174 1.4e-87 326.2 162 100.0
TPR.G23271 Trifolium pratense HOM05D007848 ORTHO05D000174 3.4e-62 241.9 122 95.9
TPR.G1533 Trifolium pratense HOM05D007848 ORTHO05D000174 8.2e-40 167.5 126 71.4
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 1.4e-34 150.2 123 55.3
Medtr8g461360 Medicago truncatula HOM05D007848 ORTHO05D000174 3.7e-32 142.1 123 52.8
Medtr2g062200 Medicago truncatula HOM05D007848 ORTHO05D000174 1.0e-29 134.0 123 51.2
TPR.G30594 Trifolium pratense HOM05D007848 ORTHO05D000174 1.3e-29 133.7 103 61.2
Medtr8g088810 Medicago truncatula HOM05D007848 ORTHO05D000174 3.0e-26 122.5 134 44.8
Medtr3g056240 Medicago truncatula HOM05D000353 ORTHO05D000174 1.8e-23 113.2 131 45.0
Medtr3g056270 Medicago truncatula HOM05D000353 ORTHO05D000174 3.1e-23 112.5 119 46.2
Medtr4g036240 Medicago truncatula HOM05D000353 ORTHO05D000174 9.1e-23 110.9 131 44.3
Medtr2g008650 Medicago truncatula HOM05D000353 ORTHO05D000174 2.2e-21 106.3 107 48.6
Medtr8g479260 Medicago truncatula HOM05D000353 ORTHO05D000174 1.1e-20 104.0 107 47.7
Medtr3g095950 Medicago truncatula HOM05D007848 ORTHO05D000174 1.5e-20 103.6 109 45.0
Medtr3g116750 Medicago truncatula HOM05D007848 ORTHO05D000174 1.5e-20 103.6 109 45.0
Medtr4g016120 Medicago truncatula HOM05D007848 ORTHO05D000174 1.5e-20 103.6 109 45.0
Medtr7g093810 Medicago truncatula HOM05D007848 ORTHO05D000174 1.9e-20 103.2 109 45.0
Medtr2g054710 Medicago truncatula HOM05D000353 ORTHO05D000174 5.5e-20 101.7 107 46.7
Medtr7g089660 Medicago truncatula HOM05D007848 ORTHO05D000174 7.2e-20 101.3 134 41.0
Medtr3g078440 Medicago truncatula HOM05D007848 ORTHO05D000174 9.4e-20 100.9 109 43.1
Medtr4g471610 Medicago truncatula HOM05D007848 ORTHO05D000174 9.4e-20 100.9 109 43.1
Medtr8g036090 Medicago truncatula HOM05D007848 ORTHO05D000174 9.4e-20 100.9 109 43.1
Medtr1g036740 Medicago truncatula HOM05D007848 ORTHO05D000174 1.2e-19 100.5 109 43.1
Medtr8g096680 Medicago truncatula HOM05D007848 ORTHO05D000174 1.2e-19 100.5 109 43.1
Medtr8g078450 Medicago truncatula HOM05D007848 ORTHO05D000174 2.1e-19 99.8 125 42.4
Medtr1g094230 Medicago truncatula HOM05D007848 ORTHO05D000174 2.7e-19 99.4 134 39.6
Medtr6g039240 Medicago truncatula HOM05D007848 ORTHO05D000174 2.7e-19 99.4 134 39.6
Medtr4g028320 Medicago truncatula HOM05D007848 ORTHO05D000174 3.6e-19 99.0 109 42.2
Medtr8g463820 Medicago truncatula HOM05D007848 ORTHO05D000174 3.6e-19 99.0 134 39.6
Medtr4g022520 Medicago truncatula HOM05D007848 ORTHO05D000174 8.0e-19 97.8 109 42.2
Medtr2g099880 Medicago truncatula HOM05D007848 ORTHO05D000174 8.8e-18 94.4 109 40.4
Phvul.005G095200 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 2.0e-17 93.2 126 38.9
Medtr1g072220 Medicago truncatula HOM05D007848 ORTHO05D000174 2.6e-17 92.8 109 41.3
Medtr2g032570 Medicago truncatula HOM05D007848 ORTHO05D000174 2.6e-17 92.8 111 41.4
Medtr3g084550 Medicago truncatula HOM05D007848 ORTHO05D000174 2.6e-17 92.8 109 40.4
Medtr5g085220 Medicago truncatula HOM05D007848 ORTHO05D000174 7.5e-17 91.3 108 40.7
Phvul.006G016100 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 4.8e-16 88.6 140 36.4
Lj3g0013474 Lotus japonicus HOM05D000353 ORTHO05D000174 2.4e-15 86.3 126 36.5
Phvul.005G096800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 2.0e-14 83.2 123 35.0
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 3.5e-14 82.4 116 36.2
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 4.5e-14 82.0 128 35.9
Medtr2g048550 Medicago truncatula HOM05D000353 ORTHO05D000174 7.7e-14 81.3 126 34.1
Medtr1g075850 Medicago truncatula HOM05D000353 ORTHO05D000174 1.0e-13 80.9 116 36.2
Phvul.010G059600 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.3e-13 80.5 117 32.5
TPR.G40139 Trifolium pratense HOM05D000096 ORTHO05D000045 1.3e-13 80.5 129 34.9
Medtr3g067530 Medicago truncatula HOM05D007848 ORTHO05D000174 1.7e-13 80.1 99 42.4
Medtr5g055160 Medicago truncatula HOM05D007848 ORTHO05D000174 2.9e-13 79.3 95 40.0
EL10Ac7g16273 Beta vulgaris HOM05D000353 ORTHO05D000174 5.0e-13 78.6 117 39.3
Medtr1g085690 Medicago truncatula HOM05D007848 ORTHO05D000174 6.5e-13 78.2 132 34.8
Medtr8g062030 Medicago truncatula HOM05D000353 ORTHO05D000174 1.9e-12 76.6 118 35.6
Medtr5g007120 Medicago truncatula HOM05D007848 ORTHO05D000174 2.5e-12 76.3 95 40.0
Medtr5g056060 Medicago truncatula HOM05D007848 ORTHO05D000174 2.5e-12 76.3 95 40.0
Medtr7g117425 Medicago truncatula HOM05D007848 ORTHO05D000174 2.5e-12 76.3 67 50.7
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 3.2e-12 75.9 101 40.6
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 3.2e-12 75.9 101 40.6
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 3.2e-12 75.9 101 40.6
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 3.2e-12 75.9 101 40.6
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 3.2e-12 75.9 101 40.6
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 3.2e-12 75.9 101 40.6
Medtr7g104000 Medicago truncatula HOM05D007848 ORTHO05D000174 4.2e-12 75.5 95 40.0
Medtr6g013455 Medicago truncatula HOM05D007848 ORTHO05D000174 1.2e-11 73.9 94 39.4
LjContig00141g0027033 Lotus japonicus HOM05D007499 ORTHO05D000174 3.6e-11 72.4 108 36.1
Lj3g0016345 Lotus japonicus HOM05D000353 ORTHO05D000174 6.1e-11 71.6 123 28.5
Lj5g0012270 Lotus japonicus HOM05D007499 ORTHO05D000174 6.1e-11 71.6 117 31.6
Glyma.05G083400 Glycine max HOM05D000353 ORTHO05D000174 8.0e-11 71.2 132 32.6
LjContig00081g0005726 Lotus japonicus HOM05D007499 ORTHO05D000174 8.0e-11 71.2 116 31.9
Lj2g0015458 Lotus japonicus HOM05D000353 ORTHO05D000174 1.4e-10 70.5 108 31.5
Phvul.001G109800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.4e-10 70.5 121 33.9
EL10Ac1g00284 Beta vulgaris HOM05D000353 ORTHO05D000174 2.3e-10 69.7 107 38.3
Medtr3g007370 Medicago truncatula HOM05D007848 ORTHO05D000174 3.0e-10 69.3 65 47.7
Medtr1788s0010 Medicago truncatula HOM05D007848 ORTHO05D000174 6.8e-10 68.2 76 39.5
arahy.Tifrunner.gnm1.ann1.2DZP9N Arachis hypogaea HOM05D010000 ORTHO05D009491 8.8e-10 67.8 96 38.5
Medtr2g091000 Medicago truncatula HOM05D007848 ORTHO05D000174 8.8e-10 67.8 65 47.7
Medtr3g031560 Medicago truncatula HOM05D007848 ORTHO05D000174 8.8e-10 67.8 65 47.7
Medtr5g068430 Medicago truncatula HOM05D007848 ORTHO05D000174 2.0e-09 66.6 91 36.3
Lj3g0013581 Lotus japonicus HOM05D007499 ORTHO05D000174 2.6e-09 66.2 122 30.3
Lj1g0017581 Lotus japonicus HOM05D000353 ORTHO05D000174 4.9e-08 62.0 109 29.4
Ah.06g192340 Amaranthus hybridus HOM05D003062 ORTHO05D003468 1.4e-07 60.5 117 33.3
Medtr6g051890 Medicago truncatula HOM05D000353 ORTHO05D000174 2.4e-07 59.7 83 38.6
arahy.Tifrunner.gnm1.ann1.P65711 Arachis hypogaea HOM05D008664 ORTHO05D000174 4.1e-07 58.9 111 31.5
A02p32050 Brassica napus HOM05D000353 ORTHO05D000174 4.1e-07 58.9 126 30.2
BraA02t08216Z Brassica rapa HOM05D000353 ORTHO05D000174 4.1e-07 58.9 126 30.2
Lj1g0016702 Lotus japonicus HOM05D007499 ORTHO05D000174 4.1e-07 58.9 117 28.2
Medtr8g059025 Medicago truncatula HOM05D000353 ORTHO05D000174 4.1e-07 58.9 73 38.4
TPR.G7354 Trifolium pratense HOM05D000353 ORTHO05D000174 7.0e-07 58.2 62 46.8
BolC7t42686H Brassica oleracea HOM05D000353 ORTHO05D000174 9.2e-07 57.8 97 36.1
Lj4g0000768 Lotus japonicus HOM05D007499 ORTHO05D000174 9.2e-07 57.8 116 25.9
Medtr3g080460 Medicago truncatula HOM05D000005 ORTHO05D000012 9.2e-07 57.8 104 33.7
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 1.6e-06 57.0 111 30.6
C03p18660 Brassica napus HOM05D000353 ORTHO05D000174 2.0e-06 56.6 126 30.2
ECA233G1973 Erigeron canadensis HOM05D000353 ORTHO05D000174 2.7e-06 56.2 145 29.0
C02p26060 Brassica napus HOM05D000353 ORTHO05D000174 3.5e-06 55.8 137 29.2
BolC4t25352H Brassica oleracea HOM05D000353 ORTHO05D000174 3.5e-06 55.8 137 29.2
BolC8t47058H Brassica oleracea HOM05D000353 ORTHO05D000174 3.5e-06 55.8 126 30.2
arahy.Tifrunner.gnm1.ann1.TZ0WH0 Arachis hypogaea HOM05D000353 ORTHO05D000174 5.9e-06 55.1 126 28.6
BcaC02g08853 Brassica carinata HOM05D000353 ORTHO05D000174 5.9e-06 55.1 92 35.9
Glyma.13G334100 Glycine max HOM05D007848 ORTHO05D000174 7.7e-06 54.7 58 41.4
Lj5g0006790 Lotus japonicus HOM05D007848 ORTHO05D000174 7.7e-06 54.7 66 36.4
Medtr6g445520 Medicago truncatula HOM05D000353 ORTHO05D000174 7.7e-06 54.7 43 55.8


User provided reference genes

Program Settings