Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23283 Trifolium pratense HOM05D007718 ORTHO05D009752 2.2e-64 248.8 125 100.0
Ca_07513_v3 Cicer arietinum L. HOM05D007718 ORTHO05D009752 5.9e-54 214.2 134 82.1
Medtr7g057760 Medicago truncatula HOM05D007718 ORTHO05D009752 2.0e-41 172.6 97 90.7
Glyma.08G353800 Glycine max HOM05D007718 ORTHO05D009752 1.3e-40 169.9 134 68.7
Phvul.008G126000 Phaseolus vulgaris HOM05D007718 ORTHO05D009752 2.8e-40 168.7 134 67.2
arahy.Tifrunner.gnm1.ann1.NNV5AG Arachis hypogaea HOM05D007718 ORTHO05D009752 5.5e-36 154.5 134 59.7
arahy.Tifrunner.gnm1.ann1.KNF5LM Arachis hypogaea HOM05D007718 ORTHO05D009752 7.2e-36 154.1 134 59.7
Lalb_Chr03g0041731 Lupinus albus HOM05D007718 ORTHO05D009752 1.0e-34 150.2 104 72.1
Prupe.8G007200 Prunus persica HOM05D007718 ORTHO05D009752 1.3e-29 133.3 134 53.7
RcHm_v2.0_Chr6g0251251 Rosa chinensis HOM05D007718 ORTHO05D009752 8.6e-29 130.6 124 55.6
Nn5g27289 Nelumbo nucifera HOM05D007718 ORTHO05D009752 1.9e-28 129.4 97 64.9
Psat3g145480 Pisum sativum HOM05D007718 ORTHO05D009752 4.3e-28 128.3 105 69.5
Dinv22108 Davidia involucrata HOM05D007718 ORTHO05D009752 7.3e-28 127.5 133 48.9
CANSAT21G0081 Cannabis sativa HOM05D007718 ORTHO05D009752 6.8e-26 120.9 88 64.8
CANSAT21G2143 Cannabis sativa HOM05D007718 ORTHO05D009752 6.8e-26 120.9 88 64.8
PSO170G0967 Papaver somniferum HOM05D007718 ORTHO05D009752 6.8e-26 120.9 97 67.0
PSO017G4737 Papaver somniferum HOM05D007718 ORTHO05D009752 1.5e-25 119.8 98 64.3
FAN27G3322 Fragaria x ananassa HOM05D007718 ORTHO05D009752 2.6e-25 119.0 97 60.8
TWI18G0705 Tripterygium wilfordii HOM05D007718 ORTHO05D009752 3.4e-25 118.6 114 55.3
GSVIVG01036292001 Vitis vinifera HOM05D007718 ORTHO05D009752 3.4e-25 118.6 131 48.1
QL08p027549 Quercus lobata HOM05D007718 ORTHO05D009752 2.2e-24 115.9 100 57.0
Actinidia04142 Actinidia chinensis HOM05D007718 ORTHO05D009752 3.7e-24 115.2 130 48.5
Thecc.08G178100 Theobroma cacao HOM05D007718 ORTHO05D009752 3.7e-24 115.2 86 62.8
MELO3C022171.2 Cucumis melo HOM05D007718 ORTHO05D009752 1.4e-23 113.2 113 51.3
MD05G1004000 Malus domestica HOM05D007718 ORTHO05D009752 1.4e-23 113.2 127 52.0
Sed0001698 Sechium edule HOM05D007718 ORTHO05D009752 1.4e-23 113.2 99 55.6
Atru.chr13.2493 Acer truncatum HOM05D007718 ORTHO05D009752 3.2e-23 112.1 106 53.8
Manes.02G205384 Manihot esculenta HOM05D007718 ORTHO05D009752 5.4e-23 111.3 136 47.1
Lj1g0018023 Lotus japonicus HOM05D007718 ORTHO05D009752 7.0e-23 110.9 104 60.6
ClCG08G001110 Citrullus lanatus HOM05D007718 ORTHO05D009752 9.2e-23 110.5 88 58.0
Ciclev10022933m.g Citrus clementina HOM05D007718 ORTHO05D009752 9.2e-23 110.5 104 53.8
Manes.02G201400 Manihot esculenta HOM05D007718 ORTHO05D009752 9.2e-23 110.5 136 47.1
Potri.019G071800 Populus trichocarpa HOM05D007718 ORTHO05D009752 9.2e-23 110.5 103 53.4
Manes.02G221600 Manihot esculenta HOM05D007718 ORTHO05D009752 1.2e-22 110.2 134 45.5
Atru.chr13.2505 Acer truncatum HOM05D007718 ORTHO05D009752 2.0e-22 109.4 107 52.3
Aqoxy5G00833 Aquilegia oxysepala HOM05D007718 ORTHO05D009752 2.0e-22 109.4 78 67.9
CDE04G1586 Ceratophyllum demersum HOM05D007718 ORTHO05D009752 2.0e-22 109.4 112 50.9
Rhsim01G0004700 Rhododendron simsii HOM05D007718 ORTHO05D009752 2.0e-22 109.4 98 53.1
Lsat_1_v5_gn_3_36061 Lactuca sativa HOM05D007718 ORTHO05D009752 7.8e-22 107.5 126 44.4
CiPaw.04G009400 Carya illinoinensis HOM05D007718 ORTHO05D009752 1.0e-21 107.1 120 45.8
Manes.02G201100 Manihot esculenta HOM05D007718 ORTHO05D009752 1.3e-21 106.7 136 45.6
Migut.C01378 Erythranthe guttata HOM05D007718 ORTHO05D009752 5.0e-21 104.8 104 49.0
TAR383G0451 Trochodendron aralioides HOM05D007718 ORTHO05D009752 5.0e-21 104.8 72 68.1
Duzib177G0547 Durio zibethinus HOM05D007718 ORTHO05D009752 8.6e-21 104.0 92 54.3
Gohir.A08G230000 Gossypium hirsutum HOM05D007718 ORTHO05D009752 1.1e-20 103.6 95 49.5
COL.COLO4_05200 Corchorus olitorius HOM05D007718 ORTHO05D009752 1.9e-20 102.8 99 53.5
SGA_v2.0_scaffold24G10646 Striga asiatica HOM05D007718 ORTHO05D009752 2.5e-20 102.4 105 48.6
Ah.05g170340 Amaranthus hybridus HOM05D007718 ORTHO05D009752 9.5e-20 100.5 92 52.2
Gohir.D08G250400 Gossypium hirsutum HOM05D007718 ORTHO05D009752 9.5e-20 100.5 86 52.3
Gorai.004G267100 Gossypium raimondii HOM05D007718 ORTHO05D009752 9.5e-20 100.5 86 52.3
MSTRG.1597 Avicennia marina HOM05D007718 ORTHO05D009752 1.2e-19 100.1 81 53.1
EL10Ac1g01266 Beta vulgaris HOM05D007718 ORTHO05D009752 1.6e-19 99.8 100 50.0
Nn5g31449 Nelumbo nucifera HOM05D007718 ORTHO05D009752 2.1e-19 99.4 67 68.7
ECA232G2296 Erigeron canadensis HOM05D005243 ORTHO05D006670 3.6e-19 98.6 91 51.6
FvH4_2g00852 Fragaria vesca HOM05D007718 ORTHO05D009752 6.2e-19 97.8 73 64.4
THA.LOC104807782 Tarenaya hassleriana HOM05D007718 ORTHO05D009752 8.0e-19 97.4 93 48.4
HPP92_012514 Vanilla planifolia HOM05D007718 ORTHO05D009752 1.4e-18 96.7 132 41.7
ATR1089G029 Amborella trichopoda HOM05D007718 ORTHO05D009752 2.3e-18 95.9 101 46.5
CSS0008152 Camellia sinensis var. sinensis HOM05D007718 ORTHO05D009752 2.3e-18 95.9 65 64.6
CARHR112060 Cardamine hirsuta HOM05D007718 ORTHO05D009752 3.1e-18 95.5 57 73.7
AL4G10300 Arabidopsis lyrata HOM05D007718 ORTHO05D009752 5.2e-18 94.7 57 73.7
C04p50420 Brassica napus HOM05D007718 ORTHO05D009752 6.8e-18 94.4 66 65.2
BolC4t26639H Brassica oleracea HOM05D007718 ORTHO05D009752 6.8e-18 94.4 66 65.2
A04p15950 Brassica napus HOM05D007718 ORTHO05D009752 1.2e-17 93.6 56 71.4
AT2G21195 Arabidopsis thaliana HOM05D007718 ORTHO05D009752 3.4e-17 92.0 76 56.6
Thhalv10000395m.g Eutrema salsugineum HOM05D007718 ORTHO05D009752 4.4e-17 91.7 56 69.6
BraA04t17231Z Brassica rapa HOM05D007718 ORTHO05D009752 9.8e-17 90.5 53 69.8
unitig_26.g9859 Utricularia gibba HOM05D007718 ORTHO05D009752 1.3e-16 90.1 70 55.7
Carub.0004s0023 Capsella rubella HOM05D007718 ORTHO05D009752 1.7e-16 89.7 58 67.2
HanXRQChr09g0267041 Helianthus annuus HOM05D007718 ORTHO05D009752 8.3e-16 87.4 89 50.6
Zm00001eb304750 Zea mays HOM05D007718 ORTHO05D009752 8.3e-16 87.4 70 54.3
vmacro13123 Vaccinium macrocarpon HOM05D007718 ORTHO05D009752 1.4e-15 86.7 72 59.7
Peaxi162Scf00048g00419 Petunia axillaris HOM05D007718 ORTHO05D009752 2.4e-15 85.9 64 65.6
FAN20G0290 Fragaria x ananassa HOM05D005243 ORTHO05D009752 4.1e-15 85.1 49 81.6
Os07g0265100 Oryza sativa ssp. japonica HOM05D007718 ORTHO05D009752 1.3e-13 80.1 60 55.0
SEGI_14522 Sequoiadendron giganteum HOM05D007718 ORTHO05D009752 2.3e-13 79.3 78 44.9
AUR62038531 Chenopodium quinoa HOM05D007718 ORTHO05D009752 8.6e-13 77.4 92 44.6
Oeu020544.1 Olea europaea HOM05D007718 ORTHO05D009752 1.4e-10 70.1 118 39.8
AagrBONN_evm.TU.Sc2ySwM_344.3280 Anthoceros agrestis HOM05D007718 ORTHO05D009752 3.1e-10 68.9 100 34.0
Cc10_g08650 Coffea canephora HOM05D007718 ORTHO05D009752 5.2e-10 68.2 67 46.3
SalBow7G2847 Salvia bowleyana HOM05D007718 ORTHO05D009752 6.8e-10 67.8 125 32.8
VMungo1383G3332 Vigna mungo HOM05D000479 ORTHO05D001285 1.2e-09 67.0 36 83.3
Mapoly0002s0003 Marchantia polymorpha HOM05D007718 ORTHO05D009752 3.4e-09 65.5 91 37.4
BcaC02g08810 Brassica carinata HOM05D007718 ORTHO05D009752 4.4e-09 65.1 34 76.5
Aa31LG7G15310 Aethionema arabicum HOM05D007718 ORTHO05D009752 1.3e-08 63.5 40 65.0
Aa31sc115G10 Aethionema arabicum HOM05D007718 ORTHO05D009752 1.3e-08 63.5 40 65.0
CsaV3_5G039910 Cucumis sativus L. HOM05D007718 ORTHO05D009752 3.5e-06 55.5 83 37.3


User provided reference genes

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