Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23271 Trifolium pratense HOM05D007848 ORTHO05D000174 2.4e-87 325.5 164 100.0
TPR.G23298 Trifolium pratense HOM05D007848 ORTHO05D000174 5.9e-62 241.1 122 95.9
TPR.G1533 Trifolium pratense HOM05D007848 ORTHO05D000174 9.2e-39 164.1 125 70.4
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 1.8e-34 149.8 118 56.8
Medtr8g461360 Medicago truncatula HOM05D007848 ORTHO05D000174 1.3e-32 143.7 118 55.9
Medtr2g062200 Medicago truncatula HOM05D007848 ORTHO05D000174 6.0e-30 134.8 118 54.2
TPR.G30594 Trifolium pratense HOM05D007848 ORTHO05D000174 8.6e-29 131.0 103 59.2
Medtr8g088810 Medicago truncatula HOM05D007848 ORTHO05D000174 2.6e-25 119.4 118 48.3
Medtr3g056240 Medicago truncatula HOM05D000353 ORTHO05D000174 9.2e-23 110.9 126 45.2
Medtr3g056270 Medicago truncatula HOM05D000353 ORTHO05D000174 9.2e-23 110.9 118 45.8
Medtr4g036240 Medicago truncatula HOM05D000353 ORTHO05D000174 4.6e-22 108.6 126 44.4
Medtr2g008650 Medicago truncatula HOM05D000353 ORTHO05D000174 6.6e-21 104.8 106 49.1
Medtr3g095950 Medicago truncatula HOM05D007848 ORTHO05D000174 6.6e-21 104.8 109 46.8
Medtr3g116750 Medicago truncatula HOM05D007848 ORTHO05D000174 6.6e-21 104.8 109 46.8
Medtr4g016120 Medicago truncatula HOM05D007848 ORTHO05D000174 6.6e-21 104.8 109 46.8
Medtr7g093810 Medicago truncatula HOM05D007848 ORTHO05D000174 8.6e-21 104.4 109 46.8
Medtr8g479260 Medicago truncatula HOM05D000353 ORTHO05D000174 3.3e-20 102.4 106 48.1
Medtr3g078440 Medicago truncatula HOM05D007848 ORTHO05D000174 4.3e-20 102.1 109 45.0
Medtr4g471610 Medicago truncatula HOM05D007848 ORTHO05D000174 4.3e-20 102.1 109 45.0
Medtr8g036090 Medicago truncatula HOM05D007848 ORTHO05D000174 4.3e-20 102.1 109 45.0
Medtr1g036740 Medicago truncatula HOM05D007848 ORTHO05D000174 5.6e-20 101.7 109 45.0
Medtr8g096680 Medicago truncatula HOM05D007848 ORTHO05D000174 5.6e-20 101.7 109 45.0
Medtr4g028320 Medicago truncatula HOM05D007848 ORTHO05D000174 9.5e-20 100.9 98 49.0
Medtr7g089660 Medicago truncatula HOM05D007848 ORTHO05D000174 1.2e-19 100.5 118 44.9
Medtr2g054710 Medicago truncatula HOM05D000353 ORTHO05D000174 2.8e-19 99.4 106 46.2
Medtr8g078450 Medicago truncatula HOM05D007848 ORTHO05D000174 3.6e-19 99.0 119 45.4
Medtr1g094230 Medicago truncatula HOM05D007848 ORTHO05D000174 4.7e-19 98.6 118 43.2
Medtr6g039240 Medicago truncatula HOM05D007848 ORTHO05D000174 4.7e-19 98.6 118 43.2
Medtr8g463820 Medicago truncatula HOM05D007848 ORTHO05D000174 6.2e-19 98.2 118 43.2
Medtr4g022520 Medicago truncatula HOM05D007848 ORTHO05D000174 1.4e-18 97.1 120 42.5
Medtr2g099880 Medicago truncatula HOM05D007848 ORTHO05D000174 4.0e-18 95.5 109 42.2
Medtr2g032570 Medicago truncatula HOM05D007848 ORTHO05D000174 1.2e-17 94.0 111 43.2
Medtr3g084550 Medicago truncatula HOM05D007848 ORTHO05D000174 1.2e-17 94.0 109 42.2
Medtr1g072220 Medicago truncatula HOM05D007848 ORTHO05D000174 2.0e-17 93.2 109 41.3
Medtr5g085220 Medicago truncatula HOM05D007848 ORTHO05D000174 3.4e-17 92.4 108 42.6
Phvul.005G095200 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.3e-16 90.5 110 40.0
Phvul.006G016100 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 8.4e-16 87.8 132 37.9
Lj3g0013474 Lotus japonicus HOM05D000353 ORTHO05D000174 7.1e-15 84.7 119 36.1
Phvul.005G096800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.6e-14 83.6 123 38.2
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 2.7e-14 82.8 116 37.9
Medtr1g075850 Medicago truncatula HOM05D000353 ORTHO05D000174 3.5e-14 82.4 116 37.9
Medtr3g067530 Medicago truncatula HOM05D007848 ORTHO05D000174 4.6e-14 82.0 99 44.4
Phvul.010G059600 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.0e-13 80.9 116 33.6
Medtr5g055160 Medicago truncatula HOM05D007848 ORTHO05D000174 1.3e-13 80.5 95 42.1
Medtr6g052340 Medicago truncatula HOM05D002465 ORTHO05D005308 3.0e-13 79.3 119 36.1
Medtr7g117425 Medicago truncatula HOM05D007848 ORTHO05D000174 8.7e-13 77.8 67 53.7
Medtr1g085690 Medicago truncatula HOM05D007848 ORTHO05D000174 1.1e-12 77.4 116 37.9
Medtr5g007120 Medicago truncatula HOM05D007848 ORTHO05D000174 1.1e-12 77.4 95 42.1
Medtr5g056060 Medicago truncatula HOM05D007848 ORTHO05D000174 1.1e-12 77.4 95 42.1
Medtr8g062030 Medicago truncatula HOM05D000353 ORTHO05D000174 1.1e-12 77.4 116 34.5
Medtr7g104000 Medicago truncatula HOM05D007848 ORTHO05D000174 1.5e-12 77.0 95 42.1
Medtr2g048550 Medicago truncatula HOM05D000353 ORTHO05D000174 1.9e-12 76.6 160 31.9
EL10Ac7g16273 Beta vulgaris HOM05D000353 ORTHO05D000174 3.3e-12 75.9 117 37.6
TPR.G40139 Trifolium pratense HOM05D000096 ORTHO05D000045 3.3e-12 75.9 111 38.7
Medtr6g013455 Medicago truncatula HOM05D007848 ORTHO05D000174 5.6e-12 75.1 94 41.5
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 7.3e-12 74.7 101 39.6
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 7.3e-12 74.7 101 39.6
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 7.3e-12 74.7 101 39.6
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 7.3e-12 74.7 101 39.6
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 7.3e-12 74.7 101 39.6
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 7.3e-12 74.7 101 39.6
LjContig00141g0027033 Lotus japonicus HOM05D007499 ORTHO05D000174 4.7e-11 72.0 107 36.4
Lj5g0012270 Lotus japonicus HOM05D007499 ORTHO05D000174 1.1e-10 70.9 116 31.9
Medtr3g007370 Medicago truncatula HOM05D007848 ORTHO05D000174 1.4e-10 70.5 65 50.8
Glyma.05G083400 Glycine max HOM05D000353 ORTHO05D000174 2.4e-10 69.7 116 33.6
Lj2g0015458 Lotus japonicus HOM05D000353 ORTHO05D000174 2.4e-10 69.7 108 31.5
Lj3g0016345 Lotus japonicus HOM05D000353 ORTHO05D000174 2.4e-10 69.7 118 28.8
Medtr1788s0010 Medicago truncatula HOM05D007848 ORTHO05D000174 2.4e-10 69.7 65 49.2
Medtr2g091000 Medicago truncatula HOM05D007848 ORTHO05D000174 4.0e-10 68.9 65 50.8
Medtr3g031560 Medicago truncatula HOM05D007848 ORTHO05D000174 4.0e-10 68.9 65 50.8
LjContig00081g0005726 Lotus japonicus HOM05D007499 ORTHO05D000174 5.2e-10 68.6 116 30.2
Phvul.001G109800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 5.2e-10 68.6 116 33.6
arahy.Tifrunner.gnm1.ann1.2DZP9N Arachis hypogaea HOM05D010000 ORTHO05D009491 6.9e-10 68.2 96 38.5
Medtr5g068430 Medicago truncatula HOM05D007848 ORTHO05D000174 9.0e-10 67.8 91 38.5
EL10Ac1g00284 Beta vulgaris HOM05D000353 ORTHO05D000174 1.2e-09 67.4 95 38.9
Lj3g0013581 Lotus japonicus HOM05D007499 ORTHO05D000174 5.8e-09 65.1 121 30.6
Lj1g0017581 Lotus japonicus HOM05D000353 ORTHO05D000174 1.4e-07 60.5 108 28.7
Medtr8g059025 Medicago truncatula HOM05D000353 ORTHO05D000174 2.4e-07 59.7 73 41.1
Ah.06g192340 Amaranthus hybridus HOM05D003062 ORTHO05D003468 3.2e-07 59.3 117 32.5
Medtr6g051890 Medicago truncatula HOM05D000353 ORTHO05D000174 4.2e-07 58.9 83 37.3
Medtr3g080460 Medicago truncatula HOM05D000005 ORTHO05D000012 1.2e-06 57.4 104 33.7
TPR.G7354 Trifolium pratense HOM05D000353 ORTHO05D000174 1.2e-06 57.4 56 51.8
arahy.Tifrunner.gnm1.ann1.P65711 Arachis hypogaea HOM05D008664 ORTHO05D000174 1.6e-06 57.0 130 29.2
BolC7t42686H Brassica oleracea HOM05D000353 ORTHO05D000174 2.1e-06 56.6 97 34.0
Lj4g0000768 Lotus japonicus HOM05D007499 ORTHO05D000174 2.1e-06 56.6 116 25.0
Lj1g0016702 Lotus japonicus HOM05D007499 ORTHO05D000174 3.5e-06 55.8 108 27.8
Lj5g0006790 Lotus japonicus HOM05D007848 ORTHO05D000174 6.0e-06 55.1 66 37.9
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 6.0e-06 55.1 111 29.7
Lj4g0003601 Lotus japonicus HOM05D000353 ORTHO05D000174 7.8e-06 54.7 107 27.1


User provided reference genes

Program Settings