Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23248 Trifolium pratense HOM05D000198 ORTHO05D005959 6.4e-90 334.0 156 100.0
Medtr2g042330 Medicago truncatula HOM05D000198 ORTHO05D005959 3.7e-45 185.3 116 81.0
Ca_02187_v3 Cicer arietinum L. HOM05D000198 ORTHO05D005959 1.8e-44 183.0 116 80.2
Glyma.09G070300 Glycine max HOM05D000198 ORTHO05D005959 6.9e-44 181.0 116 79.3
Glyma.15G178400 Glycine max HOM05D000198 ORTHO05D005959 6.9e-44 181.0 116 79.3
Phvul.009G226700 Phaseolus vulgaris HOM05D000198 ORTHO05D005959 6.9e-44 181.0 116 79.3
VMungo1309G2902 Vigna mungo HOM05D000198 ORTHO05D005959 6.9e-44 181.0 116 79.3
Psat1g134760 Pisum sativum HOM05D000198 ORTHO05D005959 2.0e-43 179.5 116 78.4
Cpa.g.sc25.134 Carica papaya HOM05D000198 ORTHO05D005959 1.3e-42 176.8 122 73.0
Lalb_Chr11g0074241 Lupinus albus HOM05D000198 ORTHO05D005959 1.3e-42 176.8 116 77.6
arahy.Tifrunner.gnm1.ann1.159H25 Arachis hypogaea HOM05D000198 ORTHO05D005959 2.9e-42 175.6 116 76.7
arahy.Tifrunner.gnm1.ann1.XD58IC Arachis hypogaea HOM05D000198 ORTHO05D005959 2.9e-42 175.6 116 76.7
Lj6g0012993 Lotus japonicus HOM05D000198 ORTHO05D005959 2.9e-42 175.6 116 76.7
Lalb_Chr11g0074221 Lupinus albus HOM05D000198 ORTHO05D005959 2.9e-42 175.6 116 76.7
unitig_748.g7471 Utricularia gibba HOM05D000198 ORTHO05D005959 3.8e-42 175.3 116 75.9
MD02G1094300 Malus domestica HOM05D000198 ORTHO05D005959 4.9e-42 174.9 116 75.9
Eucgr.F04402 Eucalyptus grandis HOM05D000198 ORTHO05D005959 6.5e-42 174.5 122 72.1
Potri.003G067700 Populus trichocarpa HOM05D000198 ORTHO05D005959 6.5e-42 174.5 122 72.1
CDE11G1141 Ceratophyllum demersum HOM05D000198 ORTHO05D005959 1.1e-41 173.7 116 75.0
Hma1.2p1_0291F.1_g114920 Hydrangea macrophylla HOM05D000198 ORTHO05D005959 1.1e-41 173.7 122 72.1
CANSAT56G2536 Cannabis sativa HOM05D000198 ORTHO05D005959 1.4e-41 173.3 116 75.9
Nn8g38614 Nelumbo nucifera HOM05D000198 ORTHO05D005959 1.9e-41 172.9 122 72.1
Potri.001G167100 Populus trichocarpa HOM05D000198 ORTHO05D005959 1.9e-41 172.9 122 72.1
vmacro22030 Vaccinium macrocarpon HOM05D000198 ORTHO05D005959 1.9e-41 172.9 122 71.3
Sabra01G0126300 Salix brachista HOM05D000198 ORTHO05D005959 2.5e-41 172.6 122 71.3
THA.LOC104815620 Tarenaya hassleriana HOM05D000198 ORTHO05D005959 2.5e-41 172.6 122 69.7
Aqoxy7G01026 Aquilegia oxysepala HOM05D000198 ORTHO05D005959 3.2e-41 172.2 122 71.3
CDE05G2779 Ceratophyllum demersum HOM05D000198 ORTHO05D005959 3.2e-41 172.2 116 74.1
MD15G1219200 Malus domestica HOM05D000198 ORTHO05D005959 3.2e-41 172.2 117 76.1
GSVIVG01015062001 Vitis vinifera HOM05D000198 ORTHO05D005959 3.2e-41 172.2 122 70.5
Cfa002976 Carpinus fangiana HOM05D000198 ORTHO05D005959 4.2e-41 171.8 122 71.3
COL.COLO4_30736 Corchorus olitorius HOM05D000198 ORTHO05D005959 4.2e-41 171.8 116 74.1
Duzib235G0296 Durio zibethinus HOM05D000198 ORTHO05D005959 4.2e-41 171.8 122 70.5
Manes.04G146300 Manihot esculenta HOM05D000198 ORTHO05D005959 4.2e-41 171.8 115 73.9
Rhsim12G0210700 Rhododendron simsii HOM05D000198 ORTHO05D005959 4.2e-41 171.8 122 70.5
Rhsim12G0211100 Rhododendron simsii HOM05D000198 ORTHO05D005959 4.2e-41 171.8 122 70.5
CSS0046920 Camellia sinensis var. sinensis HOM05D000198 ORTHO05D005959 5.5e-41 171.4 122 71.3
COL.COLO4_18083 Corchorus olitorius HOM05D000198 ORTHO05D005959 5.5e-41 171.4 122 71.3
Haze_26026 Corylus avellana HOM05D000198 ORTHO05D005959 5.5e-41 171.4 116 74.1
MBI13_g35420_MAGBIO Magnolia biondii HOM05D000198 ORTHO05D005959 5.5e-41 171.4 116 74.1
Oeu057874.2 Olea europaea HOM05D000198 ORTHO05D005959 5.5e-41 171.4 122 70.5
PGR119G2520 Punica granatum HOM05D000198 ORTHO05D005959 5.5e-41 171.4 120 71.7
Manes.11G017800 Manihot esculenta HOM05D000198 ORTHO05D005959 7.1e-41 171.0 115 73.0
Manes.11G017900 Manihot esculenta HOM05D000198 ORTHO05D005959 7.1e-41 171.0 115 73.0
Manes.11G018400 Manihot esculenta HOM05D000198 ORTHO05D005959 7.1e-41 171.0 115 73.0
Prupe.7G196700 Prunus persica HOM05D000198 ORTHO05D005959 7.1e-41 171.0 116 74.1
SalBow6G2826 Salvia bowleyana HOM05D000198 ORTHO05D005959 7.1e-41 171.0 116 74.1
SalBow6G5793 Salvia bowleyana HOM05D000198 ORTHO05D005959 7.1e-41 171.0 116 74.1
Thecc.06G122600 Theobroma cacao HOM05D000198 ORTHO05D005959 7.1e-41 171.0 122 71.3
ClCG09G001060 Citrullus lanatus HOM05D000198 ORTHO05D005959 9.3e-41 170.6 122 70.5
Dinv20419 Davidia involucrata HOM05D000198 ORTHO05D005959 9.3e-41 170.6 116 73.3
PSO104G0161 Papaver somniferum HOM05D000198 ORTHO05D005959 9.3e-41 170.6 116 73.3
PSO421G0556 Papaver somniferum HOM05D000198 ORTHO05D005959 9.3e-41 170.6 116 73.3
RcHm_v2.0_Chr2g0095351 Rosa chinensis HOM05D000198 ORTHO05D005959 9.3e-41 170.6 116 73.3
Carub.0001s4334 Capsella rubella HOM05D000198 ORTHO05D005959 1.2e-40 170.2 116 72.4
AUR62009904 Chenopodium quinoa HOM05D000198 ORTHO05D005959 1.2e-40 170.2 116 74.1
CsaV3_7G034360 Cucumis sativus L. HOM05D000198 ORTHO05D005959 1.2e-40 170.2 122 70.5
Sopen03g041040 Solanum pennellii HOM05D000198 ORTHO05D005959 1.2e-40 170.2 116 72.4
PGSC0003DMG400022885 Solanum tuberosum HOM05D000198 ORTHO05D005959 1.2e-40 170.2 116 72.4
A08p01230 Brassica napus HOM05D000198 ORTHO05D005959 1.6e-40 169.9 116 71.6
QL11p001049 Quercus lobata HOM05D000198 ORTHO05D005959 1.6e-40 169.9 121 70.2
Sp1g40550 Schrenkiella parvula HOM05D000198 ORTHO05D005959 1.6e-40 169.9 116 71.6
Zm00001eb100180 Zea mays HOM05D000198 ORTHO05D005959 1.6e-40 169.9 116 72.4
Ah.08g216940 Amaranthus hybridus HOM05D000198 ORTHO05D005959 2.1e-40 169.5 116 72.4
BcaB04g17029 Brassica carinata HOM05D000198 ORTHO05D005959 2.1e-40 169.5 116 71.6
BcaC01g01433 Brassica carinata HOM05D000198 ORTHO05D005959 2.1e-40 169.5 116 71.6
C03p91970 Brassica napus HOM05D000198 ORTHO05D005959 2.1e-40 169.5 116 71.6
BolC3t21517H Brassica oleracea HOM05D000198 ORTHO05D005959 2.1e-40 169.5 116 71.6
BraA08t32174Z Brassica rapa HOM05D000198 ORTHO05D005959 2.1e-40 169.5 116 71.6
CiPaw.03G204900 Carya illinoinensis HOM05D000198 ORTHO05D005959 2.1e-40 169.5 121 70.2
Cc00_g19070 Coffea canephora HOM05D000198 ORTHO05D005959 2.1e-40 169.5 115 73.9
Thhalv10011405m.g Eutrema salsugineum HOM05D000198 ORTHO05D005959 2.1e-40 169.5 116 71.6
HPP92_011368 Vanilla planifolia HOM05D000198 ORTHO05D005959 2.1e-40 169.5 116 73.3
CARHR044440 Cardamine hirsuta HOM05D000198 ORTHO05D005959 2.7e-40 169.1 116 71.6
AUR62001464 Chenopodium quinoa HOM05D000198 ORTHO05D005959 2.7e-40 169.1 116 73.3
Sed0020538 Sechium edule HOM05D000198 ORTHO05D005959 3.5e-40 168.7 114 73.7
Duzib192G0568 Durio zibethinus HOM05D000198 ORTHO05D005959 4.6e-40 168.3 116 71.6
Os09g0440300 Oryza sativa ssp. japonica HOM05D000198 ORTHO05D005959 4.6e-40 168.3 116 71.6
AL1G62810 Arabidopsis lyrata HOM05D000198 ORTHO05D005959 6.0e-40 167.9 116 70.7
MSTRG.9524 Avicennia marina HOM05D000198 ORTHO05D005959 6.0e-40 167.9 116 73.3
HanXRQChr10g0312481 Helianthus annuus HOM05D000198 ORTHO05D005959 6.0e-40 167.9 116 69.8
TWI14G1137 Tripterygium wilfordii HOM05D000198 ORTHO05D005959 6.0e-40 167.9 116 71.6
Ciclev10025411m.g Citrus clementina HOM05D000198 ORTHO05D005959 7.9e-40 167.5 116 71.6
ECA234G3205 Erigeron canadensis HOM05D000198 ORTHO05D005959 7.9e-40 167.5 116 70.7
Gohir.D06G149800 Gossypium hirsutum HOM05D000198 ORTHO05D005959 7.9e-40 167.5 122 70.5
Gorai.010G174800 Gossypium raimondii HOM05D000198 ORTHO05D005959 1.0e-39 167.2 122 70.5
AT1G54100 Arabidopsis thaliana HOM05D000198 ORTHO05D005959 1.3e-39 166.8 116 70.7
Gohir.A06G144000 Gossypium hirsutum HOM05D000198 ORTHO05D005959 1.3e-39 166.8 116 73.3
Aa31LG8G1290 Aethionema arabicum HOM05D000198 ORTHO05D005959 1.8e-39 166.4 116 69.8
CAN.G862.50 Capsicum annuum HOM05D000198 ORTHO05D005959 1.8e-39 166.4 116 70.7
ATR0598G121 Amborella trichopoda HOM05D000198 ORTHO05D005959 2.3e-39 166.0 116 69.8
Atru.chr1.4039 Acer truncatum HOM05D000198 ORTHO05D005959 3.0e-39 165.6 116 71.6
Migut.I01090 Erythranthe guttata HOM05D000198 ORTHO05D005959 3.9e-39 165.2 116 71.6
FvH4_1g08890 Fragaria vesca HOM05D000198 ORTHO05D005959 5.1e-39 164.9 116 70.7
FAN03G0818 Fragaria x ananassa HOM05D000198 ORTHO05D005959 5.1e-39 164.9 116 70.7
FAN19G1784 Fragaria x ananassa HOM05D000198 ORTHO05D005959 5.1e-39 164.9 116 70.7
FAN23G1242 Fragaria x ananassa HOM05D000198 ORTHO05D005959 5.1e-39 164.9 116 70.7
FAN26G2953 Fragaria x ananassa HOM05D000198 ORTHO05D005959 5.1e-39 164.9 116 70.7
FAN28G1454 Fragaria x ananassa HOM05D000198 ORTHO05D005959 5.1e-39 164.9 116 70.7
SEGI_07673 Sequoiadendron giganteum HOM05D000198 ORTHO05D005959 6.7e-39 164.5 115 71.3
Sc12g0010670 Simmondsia chinensis HOM05D000198 ORTHO05D005959 1.9e-38 162.9 116 70.7
FAN26G1556 Fragaria x ananassa HOM05D000198 ORTHO05D005959 2.5e-38 162.5 116 69.8
Pp3c2_8090 Physcomitrium patens HOM05D000198 ORTHO05D005959 7.4e-38 161.0 115 68.7
Pp3c2_8099 Physcomitrium patens HOM05D000198 ORTHO05D005959 7.4e-38 161.0 115 68.7
SMO367G0849 Selaginella moellendorffii HOM05D000198 ORTHO05D005959 1.1e-36 157.1 116 67.2
Mapoly0118s0026 Marchantia polymorpha HOM05D000198 ORTHO05D005959 1.8e-36 156.4 115 65.2
Lsat_1_v5_gn_5_136600 Lactuca sativa HOM05D000198 ORTHO05D005959 2.5e-30 136.0 115 60.9
Haze_26480 Corylus avellana HOM05D000198 ORTHO05D005959 4.3e-30 135.2 114 56.1
MELO3C024345.2 Cucumis melo HOM05D000198 ORTHO05D005959 5.7e-30 134.8 104 66.3
EL10Ac7g16425 Beta vulgaris HOM05D000198 ORTHO05D005959 2.8e-29 132.5 97 70.1
TAR626G0433 Trochodendron aralioides HOM05D000198 ORTHO05D005959 3.7e-29 132.1 98 68.4
Lj5C35T2 Lonicera japonica HOM05D000198 ORTHO05D005959 6.3e-29 131.3 97 69.1
Solyc03g122310.4 Solanum lycopersicum HOM05D000198 ORTHO05D005959 2.4e-28 129.4 103 64.1
Zm00001eb085560 Zea mays HOM05D000198 ORTHO05D005959 2.4e-28 129.4 97 67.0
HanXRQChr12g0360421 Helianthus annuus HOM05D000198 ORTHO05D005959 2.0e-27 126.3 100 63.0
Hund18683 Selenicereus undatus HOM05D000198 ORTHO05D005959 7.7e-27 124.4 97 67.0
Sabra03G0039600 Salix brachista HOM05D000198 ORTHO05D005959 5.5e-25 118.2 134 51.5
Zm00001eb337490 Zea mays HOM05D000198 ORTHO05D005959 2.8e-21 105.9 86 61.6
Zm00001eb180340 Zea mays HOM05D000198 ORTHO05D005959 8.2e-21 104.4 86 61.6
DCAR_022687 Daucus carota HOM05D000198 ORTHO05D005959 1.1e-20 104.0 85 63.5
A06p00550 Brassica napus HOM05D000198 ORTHO05D005959 3.1e-20 102.4 91 58.2
BraA06t23269Z Brassica rapa HOM05D000198 ORTHO05D005959 3.1e-20 102.4 91 58.2
Nitab4.5_0002898g0050 Nicotiana tabacum HOM05D000198 ORTHO05D005959 5.3e-20 101.7 86 59.3
Nitab4.5_0005225g0020 Nicotiana tabacum HOM05D000198 ORTHO05D005959 5.3e-20 101.7 86 60.5
Actinidia24721 Actinidia chinensis HOM05D000198 ORTHO05D005959 7.7e-19 97.8 60 75.0
Peaxi162Scf00038g02031 Petunia axillaris HOM05D000198 ORTHO05D005959 1.3e-18 97.1 81 60.5
Dinv37857 Davidia involucrata HOM05D000198 ORTHO05D005959 5.0e-18 95.1 58 75.9
Migut.O00960 Erythranthe guttata HOM05D000198 ORTHO05D005959 7.2e-17 91.3 42 100.0
BcaC08g43591 Brassica carinata HOM05D000198 ORTHO05D032538 9.4e-17 90.9 96 55.2
GSVIVG01016734001 Vitis vinifera HOM05D000198 ORTHO05D005959 1.7e-13 80.1 87 49.4
Zm00001eb422540 Zea mays HOM05D000198 ORTHO05D005959 2.4e-12 76.3 67 56.7
PGSC0003DMG400034597 Solanum tuberosum HOM05D000198 ORTHO05D005959 1.0e-10 70.9 70 55.7


User provided reference genes

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