Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23230 Trifolium pratense HOM05D001184 ORTHO05D008450 3.4e-83 311.6 157 100.0
Ca_16863_v3 Cicer arietinum L. HOM05D001184 ORTHO05D008450 3.0e-71 271.9 157 86.6
Psat5g068320 Pisum sativum HOM05D001184 ORTHO05D008450 3.3e-70 268.5 157 85.4
Medtr3g093870 Medicago truncatula HOM05D001184 ORTHO05D008450 9.6e-70 266.9 157 87.3
Glyma.06G142400 Glycine max HOM05D001184 ORTHO05D008450 7.6e-67 257.3 157 81.5
Phvul.009G043500 Phaseolus vulgaris HOM05D001184 ORTHO05D008450 6.5e-66 254.2 157 79.6
Glyma.04G222900 Glycine max HOM05D001184 ORTHO05D008450 8.4e-66 253.8 156 78.8
Lj1g0025527 Lotus japonicus HOM05D001184 ORTHO05D008450 8.7e-63 243.8 157 77.7
VMungo1309G2858 Vigna mungo HOM05D001184 ORTHO05D008450 3.7e-61 238.4 157 76.4
Lalb_Chr11g0067771 Lupinus albus HOM05D001184 ORTHO05D008450 1.5e-59 233.0 152 75.7
Lalb_Chr08g0239191 Lupinus albus HOM05D001184 ORTHO05D008450 1.0e-58 230.3 151 72.8
arahy.Tifrunner.gnm1.ann1.1BRL89 Arachis hypogaea HOM05D001184 ORTHO05D008450 2.7e-56 222.2 157 72.6
QL08p064889 Quercus lobata HOM05D001184 ORTHO05D008450 1.2e-43 180.3 151 58.9
Duzib128G0215 Durio zibethinus HOM05D001184 ORTHO05D008450 4.7e-40 168.3 150 52.7
Cfa001206 Carpinus fangiana HOM05D001184 ORTHO05D008450 2.3e-39 166.0 151 53.0
Gohir.D10G187100 Gossypium hirsutum HOM05D001184 ORTHO05D008450 2.6e-38 162.5 150 52.0
Gorai.011G209900 Gossypium raimondii HOM05D001184 ORTHO05D008450 2.6e-38 162.5 150 52.0
Atru.chr12.216 Acer truncatum HOM05D001184 ORTHO05D008450 9.7e-38 160.6 152 52.0
Gohir.A10G180150 Gossypium hirsutum HOM05D001184 ORTHO05D008450 9.7e-38 160.6 150 51.3
Thecc.10G179100 Theobroma cacao HOM05D001184 ORTHO05D008450 9.7e-38 160.6 150 50.7
CANSAT56G1814 Cannabis sativa HOM05D001184 ORTHO05D008450 1.1e-36 157.1 151 51.7
GSVIVG01032669001 Vitis vinifera HOM05D001184 ORTHO05D008450 9.1e-36 154.1 151 52.3
CsaV3_5G011010 Cucumis sativus L. HOM05D001184 ORTHO05D008450 1.2e-35 153.7 153 49.7
CiPaw.04G147400 Carya illinoinensis HOM05D001184 ORTHO05D008450 1.6e-35 153.3 151 51.7
Sed0004820 Sechium edule HOM05D001184 ORTHO05D008450 2.0e-35 152.9 152 50.7
Ciclev10031719m.g Citrus clementina HOM05D001184 ORTHO05D008450 2.6e-35 152.5 151 51.0
Manes.07G141100 Manihot esculenta HOM05D001184 ORTHO05D008450 3.5e-35 152.1 161 50.3
Eucgr.J00111 Eucalyptus grandis HOM05D001184 ORTHO05D008450 4.5e-35 151.8 158 48.7
Manes.07G143201 Manihot esculenta HOM05D001184 ORTHO05D008450 4.5e-35 151.8 161 50.3
ClCG07G005160 Citrullus lanatus HOM05D001184 ORTHO05D008450 5.9e-35 151.4 170 47.1
COL.COLO4_19421 Corchorus olitorius HOM05D001184 ORTHO05D008450 5.9e-35 151.4 150 51.3
Potri.019G058700 Populus trichocarpa HOM05D001184 ORTHO05D008450 5.9e-35 151.4 150 52.7
Manes.07G144101 Manihot esculenta HOM05D001184 ORTHO05D008450 1.0e-34 150.6 161 49.7
AL4G38530 Arabidopsis lyrata HOM05D001184 ORTHO05D008450 6.5e-34 147.9 153 48.4
TWI73G1243 Tripterygium wilfordii HOM05D001184 ORTHO05D008450 6.5e-34 147.9 151 47.0
DCAR_020150 Daucus carota HOM05D001184 ORTHO05D008450 1.5e-33 146.7 154 48.1
Sabra19G0074000 Salix brachista HOM05D001184 ORTHO05D008450 4.2e-33 145.2 150 52.7
Nn2g10295 Nelumbo nucifera HOM05D001184 ORTHO05D008450 5.5e-33 144.8 153 47.1
Dinv34490 Davidia involucrata HOM05D001184 ORTHO05D008450 7.2e-33 144.4 150 48.0
Thhalv10016505m.g Eutrema salsugineum HOM05D001184 ORTHO05D008450 7.2e-33 144.4 154 48.1
Carub.0004s2295 Capsella rubella HOM05D001184 ORTHO05D008450 9.4e-33 144.1 153 46.4
Sp4g22990 Schrenkiella parvula HOM05D001184 ORTHO05D008450 2.1e-32 142.9 149 47.7
TAR623G1554 Trochodendron aralioides HOM05D001184 ORTHO05D008450 2.1e-32 142.9 152 47.4
Cpa.g.sc19.53 Carica papaya HOM05D001184 ORTHO05D008450 2.7e-32 142.5 150 51.3
AT2G40660 Arabidopsis thaliana HOM05D001184 ORTHO05D008450 3.6e-32 142.1 152 48.7
Cc02_g05330 Coffea canephora HOM05D001184 ORTHO05D008450 3.6e-32 142.1 158 48.1
Migut.F00609 Erythranthe guttata HOM05D001184 ORTHO05D008450 4.7e-32 141.7 151 47.7
MSTRG.168 Avicennia marina HOM05D001184 ORTHO05D008450 1.0e-31 140.6 153 49.7
Aqoxy2G00714 Aquilegia oxysepala HOM05D001184 ORTHO05D008450 1.4e-31 140.2 153 45.8
CARHR135770 Cardamine hirsuta HOM05D001184 ORTHO05D008450 1.4e-31 140.2 150 46.7
MBI15_g01604_MAGBIO Magnolia biondii HOM05D001184 ORTHO05D008450 1.5e-30 136.7 155 43.9
Lsat_1_v5_gn_2_126320 Lactuca sativa HOM05D001184 ORTHO05D008450 2.0e-30 136.3 151 47.7
Solyc06g048610.3 Solanum lycopersicum HOM05D001184 ORTHO05D008450 2.0e-30 136.3 161 46.0
Sopen06g014800 Solanum pennellii HOM05D001184 ORTHO05D008450 2.0e-30 136.3 161 46.6
HanXRQChr14g0460711 Helianthus annuus HOM05D001184 ORTHO05D008450 3.3e-30 135.6 151 47.7
THA.LOC104803210 Tarenaya hassleriana HOM05D001184 ORTHO05D008450 4.4e-30 135.2 149 44.3
CSS0018804 Camellia sinensis var. sinensis HOM05D001184 ORTHO05D008450 7.5e-30 134.4 154 44.8
A05p01840 Brassica napus HOM05D001184 ORTHO05D008450 9.7e-30 134.0 154 46.1
AUR62030607 Chenopodium quinoa HOM05D001184 ORTHO05D008450 1.7e-29 133.3 152 44.1
C04p02140 Brassica napus HOM05D001184 ORTHO05D008450 2.2e-29 132.9 154 45.5
BolC4t21862H Brassica oleracea HOM05D001184 ORTHO05D008450 2.2e-29 132.9 154 45.5
BraA05t19182Z Brassica rapa HOM05D001184 ORTHO05D008450 2.2e-29 132.9 154 46.8
BcaC02g12728 Brassica carinata HOM05D001184 ORTHO05D008450 3.7e-29 132.1 154 45.5
MD07G1234000 Malus domestica HOM05D001184 ORTHO05D008450 3.7e-29 132.1 151 42.4
Prupe.2G264400 Prunus persica HOM05D001184 ORTHO05D008450 4.8e-29 131.7 151 43.7
Sc11g0005860 Simmondsia chinensis HOM05D001184 ORTHO05D008450 4.8e-29 131.7 153 45.1
EL10Ac2g02652 Beta vulgaris HOM05D001184 ORTHO05D008450 6.3e-29 131.3 151 45.0
CDE12G0518 Ceratophyllum demersum HOM05D001184 ORTHO05D008450 6.3e-29 131.3 154 44.2
MD01G1168000 Malus domestica HOM05D001184 ORTHO05D008450 6.3e-29 131.3 151 41.1
Nitab4.5_0006093g0010 Nicotiana tabacum HOM05D001184 ORTHO05D008450 6.3e-29 131.3 160 46.9
Lj1A967T43 Lonicera japonica HOM05D001184 ORTHO05D008450 8.2e-29 131.0 102 55.9
Oeu054416.1 Olea europaea HOM05D001184 ORTHO05D008450 2.4e-28 129.4 130 48.5
Actinidia13646 Actinidia chinensis HOM05D001184 ORTHO05D008450 3.1e-28 129.0 145 46.9
Aa31LG3G1460 Aethionema arabicum HOM05D001184 ORTHO05D008450 3.1e-28 129.0 148 43.9
CAN.G17.14 Capsicum annuum HOM05D001184 ORTHO05D008450 4.1e-28 128.6 156 44.9
AUR62024937 Chenopodium quinoa HOM05D001184 ORTHO05D008450 1.2e-27 127.1 152 43.4
Hund13448 Selenicereus undatus HOM05D001184 ORTHO05D008450 1.6e-27 126.7 152 42.8
Rhsim03G0152900 Rhododendron simsii HOM05D001184 ORTHO05D008450 3.5e-27 125.6 171 42.1
HPP92_015593 Vanilla planifolia HOM05D001184 ORTHO05D008450 3.5e-27 125.6 156 43.6
FvH4_7g25960 Fragaria vesca HOM05D001184 ORTHO05D008450 7.7e-27 124.4 151 42.4
PGR044G0579 Punica granatum HOM05D001184 ORTHO05D008450 1.0e-26 124.0 160 41.2
Nitab4.5_0000094g0120 Nicotiana tabacum HOM05D001184 ORTHO05D008450 1.7e-26 123.2 160 43.8
vmacro06895 Vaccinium macrocarpon HOM05D001184 ORTHO05D008450 2.9e-26 122.5 156 43.6
FAN10G0995 Fragaria x ananassa HOM05D001184 ORTHO05D008450 1.5e-25 120.2 160 40.0
SGA_v2.0_scaffold44G16623 Striga asiatica HOM05D001184 ORTHO05D008450 2.5e-25 119.4 154 44.2
ECA238G2482 Erigeron canadensis HOM05D001184 ORTHO05D008450 3.2e-25 119.0 151 43.7
PSO339G5039 Papaver somniferum HOM05D001184 ORTHO05D008450 9.4e-25 117.5 150 42.0
FAN03G2754 Fragaria x ananassa HOM05D001184 ORTHO05D008450 1.2e-24 117.1 160 39.4
PSO384G4419 Papaver somniferum HOM05D001184 ORTHO05D008450 2.1e-24 116.3 150 42.0
FAN01G0629 Fragaria x ananassa HOM05D001184 ORTHO05D008450 1.0e-23 114.0 160 38.8
Os01g0821800 Oryza sativa ssp. japonica HOM05D001184 ORTHO05D008450 4.0e-23 112.1 151 41.7
Psat5g068280 Pisum sativum HOM05D001184 ORTHO05D008450 1.2e-22 110.5 158 46.8
MELO3C020154.2 Cucumis melo HOM05D001184 ORTHO05D008450 2.0e-22 109.8 152 41.4
Manes.07G142750 Manihot esculenta HOM05D001184 ORTHO05D008450 3.4e-22 109.0 100 53.0
Ah.12g064390 Amaranthus hybridus HOM05D001184 ORTHO05D008450 1.8e-20 103.2 138 42.8
RcHm_v2.0_Chr1g0372341 Rosa chinensis HOM05D001184 ORTHO05D008450 3.1e-20 102.4 99 46.5
ATR1127G003 Amborella trichopoda HOM05D001184 ORTHO05D008450 2.0e-19 99.8 151 36.4
unitig_578.g16605 Utricularia gibba HOM05D001184 ORTHO05D008450 2.9e-18 95.9 118 40.7
SalBow3G0802 Salvia bowleyana HOM05D001184 ORTHO05D008450 8.6e-18 94.4 105 42.9
Peaxi162Scf00304g00618 Petunia axillaris HOM05D001184 ORTHO05D008450 2.8e-16 89.4 161 39.1
SEGI_14061 Sequoiadendron giganteum HOM05D001184 ORTHO05D008450 2.8e-16 89.4 137 35.0
Psat1g168480 Pisum sativum HOM05D001184 ORTHO05D008450 4.7e-16 88.6 55 80.0
AagrBONN_evm.TU.Sc2ySwM_344.629 Anthoceros agrestis HOM05D001184 ORTHO05D008450 4.0e-15 85.5 103 39.8
SMO171G0122 Selaginella moellendorffii HOM05D001184 ORTHO05D008450 1.5e-14 83.6 100 40.0
SMO353G0071 Selaginella moellendorffii HOM05D001184 ORTHO05D008450 2.6e-14 82.8 100 40.0
Zm00001eb368820 Zea mays HOM05D001184 ORTHO05D008450 4.4e-14 82.0 100 40.0
SHI28911 Sapria himalayana HOM05D001184 ORTHO05D008450 9.8e-14 80.9 109 40.4
Mapoly0179s0014 Marchantia polymorpha HOM05D001184 ORTHO05D008450 6.3e-13 78.2 143 32.2
Pp3c15_24000 Physcomitrium patens HOM05D001184 ORTHO05D008450 7.8e-11 71.2 102 37.3
FAN06G0458 Fragaria x ananassa HOM05D001184 ORTHO05D008450 1.7e-10 70.1 159 31.4
Haze_17360 Corylus avellana HOM05D001184 ORTHO05D008450 1.5e-09 67.0 151 31.8
Glyma.09G158400 Glycine max HOM05D001184 ORTHO05D213776 5.6e-09 65.1 70 52.9


User provided reference genes

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