Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 4.9e-283 977.2 483 100.0
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 2.1e-209 732.6 493 77.9
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 1.8e-200 703.0 487 75.2
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 5.2e-176 621.7 494 67.4
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 1.2e-159 567.4 483 64.6
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 5.3e-152 542.0 500 60.0
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 1.2e-151 540.8 524 57.4
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 1.8e-147 526.9 543 55.6
Glyma.16G166500 Glycine max HOM05D006715 ORTHO05D008345 2.5e-141 506.5 496 57.7
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 6.7e-139 498.4 480 54.6
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 8.2e-129 464.9 497 50.9
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 6.9e-128 461.8 504 49.4
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 3.4e-127 459.5 497 50.1
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 4.5e-127 459.1 504 49.2
QL09p013340 Quercus lobata HOM05D006715 ORTHO05D008345 3.8e-126 456.1 471 53.1
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 5.5e-125 452.2 491 50.3
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 2.7e-124 449.9 465 57.8
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 3.3e-122 443.0 498 49.4
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 4.4e-122 442.6 491 50.3
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 2.8e-121 439.9 476 49.8
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 4.8e-121 439.1 495 49.1
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 4.1e-120 436.0 489 48.1
Prupe.8G033600 Prunus persica HOM05D006715 ORTHO05D008345 1.0e-118 431.4 480 50.0
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 2.5e-117 426.8 496 47.4
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 4.2e-117 426.0 503 47.5
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 5.5e-117 425.6 491 47.0
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 1.2e-116 424.5 422 55.5
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 8.0e-116 421.8 532 46.8
Haze_17767 Corylus avellana HOM05D006715 ORTHO05D008345 2.0e-114 417.2 389 55.5
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 3.7e-113 412.9 490 48.6
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 2.6e-111 406.8 490 44.9
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 5.0e-110 402.5 479 45.9
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 3.6e-108 396.4 490 45.9
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 4.7e-108 396.0 478 45.6
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 6.1e-108 395.6 494 45.1
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 8.0e-108 395.2 491 46.0
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 3.0e-107 393.3 491 44.8
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 5.2e-107 392.5 486 45.5
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 2.6e-106 390.2 466 45.9
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 9.7e-106 388.3 470 46.4
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 9.7e-106 388.3 493 45.6
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 1.3e-105 387.9 483 42.9
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 4.8e-105 386.0 489 44.0
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 8.3e-105 385.2 493 45.0
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 4.1e-104 382.9 485 46.0
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 5.0e-102 375.9 482 45.2
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 4.2e-101 372.9 505 43.6
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 1.4e-99 367.9 491 44.4
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 1.4e-99 367.9 506 43.3
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 1.8e-99 367.5 389 51.9
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 2.3e-99 367.1 469 45.2
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 4.8e-97 359.4 437 46.2
Lalb_Chr01g0009561 Lupinus albus HOM05D006715 ORTHO05D008345 3.1e-96 356.7 309 61.2
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 2.0e-95 354.0 491 43.8
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 7.7e-95 352.1 500 40.6
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 5.5e-93 345.9 500 42.4
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 2.8e-92 343.6 471 42.7
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 3.0e-91 340.1 495 40.6
PGSC0003DMG400024094 Solanum tuberosum HOM05D006715 ORTHO05D008345 4.9e-89 332.8 387 45.2
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 4.5e-87 326.2 480 43.3
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 4.7e-84 316.2 474 42.6
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 8.0e-84 315.5 373 48.0
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 8.0e-84 315.5 475 40.2
Thhalv10003905m.g Eutrema salsugineum HOM05D006715 ORTHO05D008345 2.3e-83 313.9 474 40.7
Glyma.16G166333 Glycine max HOM05D006715 ORTHO05D008345 2.0e-82 310.8 257 62.3
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 4.9e-81 306.2 492 37.8
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 1.0e-78 298.5 326 53.1
Nitab4.5_0002764g0020 Nicotiana tabacum HOM05D006715 ORTHO05D008345 3.9e-78 296.6 358 43.9
AL1G51600 Arabidopsis lyrata HOM05D006715 ORTHO05D008345 1.1e-77 295.0 474 39.0
AT1G43245 Arabidopsis thaliana HOM05D006715 ORTHO05D008345 5.6e-77 292.7 473 39.3
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 6.8e-75 285.8 468 41.5
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 8.9e-75 285.4 477 41.5
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 2.6e-74 283.9 477 41.3
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 2.6e-74 283.9 461 39.9
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 1.7e-73 281.2 475 41.5
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 1.7e-73 281.2 477 41.3
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 2.9e-73 280.4 490 38.0
BcaB01g02294 Brassica carinata HOM05D006715 ORTHO05D008345 4.9e-73 279.6 480 40.0
Lj2g0026984 Lotus japonicus HOM05D006715 ORTHO05D008345 1.1e-72 278.5 199 73.4
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 2.4e-72 277.3 507 36.5
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 3.2e-72 276.9 340 45.9
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 1.6e-71 274.6 466 36.7
ATR0820G173 Amborella trichopoda HOM05D006715 ORTHO05D008345 2.7e-71 273.9 509 36.3
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 2.3e-70 270.8 489 39.1
CSS0020422 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.4e-64 250.8 276 47.8
Os04g0423600 Oryza sativa ssp. japonica HOM05D006715 ORTHO05D008345 1.2e-63 248.4 484 33.9
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 7.8e-63 245.7 280 47.9
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 3.9e-62 243.4 489 33.1
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 1.6e-60 238.0 161 75.8
SHI09071 Sapria himalayana HOM05D006715 ORTHO05D008345 2.1e-60 237.7 550 33.6
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 6.2e-60 236.1 197 67.0
AUR62040600 Chenopodium quinoa HOM05D006715 ORTHO05D008345 1.4e-59 235.0 294 46.9
Potri.005G193701 Populus trichocarpa HOM05D006715 ORTHO05D008345 1.5e-53 214.9 307 40.1
Carub.0001s3453 Capsella rubella HOM05D006715 ORTHO05D008345 7.6e-50 202.6 355 37.2
TAR381G1110 Trochodendron aralioides HOM05D006715 ORTHO05D008345 2.9e-49 200.7 315 38.1
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 2.5e-45 187.6 234 44.9
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 2.0e-42 177.9 259 40.9
CSS0028068 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 4.6e-39 166.8 231 40.7
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 2.5e-37 161.0 179 49.2
SEGI_34185 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 7.4e-37 159.5 453 28.0
HPP92_009297 Vanilla planifolia HOM05D006715 ORTHO05D008345 4.8e-36 156.8 282 35.5
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 2.7e-31 141.0 165 47.9
Gohir.1Z049355 Gossypium hirsutum HOM05D006715 ORTHO05D008345 3.3e-29 134.0 154 46.1
Medtr3g062560 Medicago truncatula HOM05D006715 ORTHO05D008345 3.1e-27 127.5 79 82.3
SEGI_11470 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 6.9e-27 126.3 176 39.8
HPP92_009296 Vanilla planifolia HOM05D006715 ORTHO05D008345 4.2e-24 117.1 161 42.2
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 5.7e-21 106.7 125 45.6
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.4e-19 101.3 124 53.2
arahy.Tifrunner.gnm1.ann1.12T13Y Arachis hypogaea HOM05D006715 ORTHO05D008345 2.5e-13 81.3 52 69.2
Carub.0001s3454 Capsella rubella HOM05D006715 ORTHO05D008345 5.3e-11 73.6 49 65.3
QL02p038810 Quercus lobata HOM05D006715 ORTHO05D008345 2.2e-09 68.2 169 33.1
SEGI_02927 Sequoiadendron giganteum HOM05D006715 ORTHO05D008345 1.8e-06 58.5 226 26.1
CSS0020713 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 5.1e-06 57.0 123 38.2
Sc02g0003940 Simmondsia chinensis HOM05D006715 ORTHO05D008345 6.7e-06 56.6 39 69.2


User provided reference genes

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