Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 9.7e-242 839.7 422 100.0
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 1.3e-206 723.0 410 90.2
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 5.0e-206 721.1 410 90.2
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 1.2e-196 689.9 368 92.9
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 3.0e-190 668.7 422 79.6
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 2.5e-189 665.6 418 80.6
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 1.6e-188 662.9 425 78.6
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 2.8e-188 662.1 423 79.2
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 1.1e-187 660.2 420 79.3
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 1.9e-184 649.4 378 83.3
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 1.9e-176 622.9 425 76.0
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 2.1e-172 609.4 418 75.1
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 1.2e-167 593.6 404 74.5
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 6.0e-167 591.3 429 69.7
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 3.9e-166 588.6 434 69.6
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 8.7e-166 587.4 386 74.6
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 1.1e-165 587.0 389 74.0
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 4.3e-165 585.1 395 72.7
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 4.3e-165 585.1 421 69.6
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 4.3e-165 585.1 427 68.6
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 1.2e-164 583.6 387 75.2
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.6e-164 583.2 421 69.6
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 2.8e-164 582.4 421 69.1
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 8.1e-164 580.9 385 75.3
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 8.1e-164 580.9 385 74.8
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.1e-163 578.9 419 71.1
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 4.4e-162 575.1 394 72.8
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 1.3e-161 573.5 387 74.7
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 2.4e-160 569.3 364 74.5
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 5.4e-160 568.2 431 68.0
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 1.0e-158 563.9 393 71.0
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 1.1e-157 560.5 411 67.6
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 1.9e-157 559.7 407 67.3
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 2.5e-157 559.3 411 67.9
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 4.3e-157 558.5 376 70.7
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 4.3e-157 558.5 370 70.8
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 5.6e-157 558.1 406 67.7
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 1.3e-156 557.0 365 74.8
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 4.8e-156 555.1 401 67.8
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 4.8e-156 555.1 401 67.8
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 6.2e-156 554.7 403 68.2
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 8.1e-156 554.3 417 65.5
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 1.8e-155 553.1 407 67.6
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 6.9e-155 551.2 427 64.9
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 1.2e-154 550.4 426 64.8
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 1.2e-154 550.4 422 65.4
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 2.6e-154 549.3 425 64.9
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 5.8e-154 548.1 401 68.3
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 2.2e-153 546.2 409 65.5
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 2.9e-153 545.8 407 66.3
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 7.1e-152 541.2 422 65.2
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 9.3e-152 540.8 367 71.4
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 1.2e-151 540.4 377 69.0
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 1.6e-151 540.0 414 63.0
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 3.5e-151 538.9 421 64.4
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 2.3e-150 536.2 366 69.7
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 6.7e-150 534.6 395 67.1
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 8.7e-150 534.3 380 67.9
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 4.3e-149 531.9 347 72.6
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 5.8e-146 521.5 361 68.4
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 5.8e-146 521.5 425 65.6
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.3e-145 520.4 359 67.7
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 1.3e-145 520.4 410 65.6
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 2.9e-145 519.2 422 61.6
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 2.9e-145 519.2 393 65.4
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 1.9e-144 516.5 379 66.8
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 4.2e-144 515.4 358 69.6
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 4.2e-144 515.4 352 71.6
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 9.3e-144 514.2 388 69.3
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 3.5e-143 512.3 375 65.6
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 5.1e-142 508.4 378 66.4
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.8e-140 501.9 388 66.5
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 4.8e-140 501.9 374 66.0
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 8.2e-140 501.1 390 65.6
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 1.0e-137 494.2 368 64.1
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 1.4e-136 490.3 368 65.8
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 6.0e-135 485.0 347 69.2
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 5.1e-134 481.9 393 63.4
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 1.4e-131 473.8 476 53.2
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 8.5e-129 464.5 383 59.8
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.3e-126 456.4 354 65.0
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 1.4e-118 430.6 285 73.7
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 1.8e-118 430.3 360 56.4
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 3.9e-118 429.1 434 55.3
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 1.4e-115 420.6 361 57.3
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 5.5e-112 408.7 413 54.7
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 5.3e-107 392.1 354 54.8
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 9.1e-107 391.3 388 56.4
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.2e-106 391.0 358 53.6
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 7.0e-99 365.2 271 66.1
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 9.1e-99 364.8 336 53.0
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 5.9e-98 362.1 287 62.7
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 3.8e-97 359.4 366 53.6
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 1.2e-87 327.8 283 58.0
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.6e-79 300.8 342 48.0
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 1.7e-65 254.2 375 40.3
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.1e-64 251.5 388 41.2
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 1.1e-51 208.4 127 78.0
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 8.7e-49 198.7 130 71.5
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 1.0e-41 175.3 151 61.6
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 5.6e-40 169.5 108 75.9
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 5.6e-40 169.5 183 49.7
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 7.4e-24 115.9 168 39.9
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 1.6e-23 114.8 125 50.4
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 1.6e-23 114.8 375 27.2
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 6.2e-23 112.8 79 64.6
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 1.1e-22 112.1 99 57.6
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 3.1e-22 110.5 82 65.9
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 9.0e-22 109.0 111 50.5
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 1.4e-19 101.7 67 70.1
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 4.2e-19 100.1 78 65.4
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 9.3e-19 99.0 112 50.9
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 1.5e-16 91.7 224 31.7
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 6.3e-15 86.3 178 33.1
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 5.9e-13 79.7 47 80.9
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 3.8e-12 77.0 56 62.5
Lj1A1232G87 Lonicera japonica HOM05D004784 ORTHO05D005762 2.8e-07 60.8 334 22.8
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 4.1e-06 57.0 32 71.9


User provided reference genes

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