Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 8.5e-279 963.0 475 100.0
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 5.4e-249 864.0 475 90.3
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 2.5e-238 828.6 475 86.5
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 8.4e-234 813.5 503 82.1
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 4.2e-217 758.1 472 79.0
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 5.6e-214 747.7 474 78.9
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 4.8e-213 744.6 471 77.7
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 8.4e-210 733.8 475 75.8
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 4.6e-208 728.0 467 76.7
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 3.9e-207 724.9 467 77.1
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 1.3e-202 709.9 471 74.5
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 3.8e-202 708.4 475 73.3
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 6.5e-202 707.6 472 75.0
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 5.5e-201 704.5 469 73.8
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 7.9e-200 700.7 475 74.5
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 1.8e-199 699.5 479 73.1
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 3.0e-199 698.7 480 72.3
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 5.1e-199 698.0 462 74.2
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 5.1e-199 698.0 476 72.3
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 5.1e-199 698.0 475 73.3
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 7.4e-198 694.1 460 73.0
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 7.4e-198 694.1 472 71.2
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 9.6e-198 693.7 472 71.2
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 1.3e-197 693.3 471 71.3
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 3.7e-197 691.8 472 71.0
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 4.8e-197 691.4 468 72.4
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 1.8e-196 689.5 465 73.3
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 1.8e-196 689.5 471 73.2
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 5.3e-196 688.0 472 70.6
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 6.9e-196 687.6 470 71.7
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 1.2e-195 686.8 472 72.0
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 2.6e-195 685.6 474 72.2
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 5.9e-195 684.5 468 71.4
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 7.6e-195 684.1 461 72.0
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 1.0e-194 683.7 423 76.1
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 1.7e-194 682.9 470 70.2
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 2.2e-194 682.6 468 71.8
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 5.0e-194 681.4 462 72.5
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 1.9e-193 679.5 466 72.5
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 1.9e-193 679.5 463 73.4
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 1.9e-193 679.5 462 72.5
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 1.9e-193 679.5 459 73.0
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 1.9e-193 679.5 473 69.8
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 2.5e-193 679.1 463 71.9
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 4.2e-193 678.3 471 71.3
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 9.3e-193 677.2 474 71.5
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 1.2e-192 676.8 473 70.2
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 1.6e-192 676.4 461 70.7
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 1.0e-191 673.7 464 71.8
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 1.8e-191 672.9 419 76.4
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 1.8e-191 672.9 466 71.7
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 3.9e-191 671.8 473 70.0
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 5.1e-191 671.4 470 70.0
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 6.7e-191 671.0 469 70.4
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 2.5e-190 669.1 474 70.7
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 5.7e-190 667.9 471 68.8
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 7.4e-190 667.5 419 75.2
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 9.7e-190 667.2 451 71.8
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 2.8e-189 665.6 451 71.6
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 4.8e-189 664.8 459 71.2
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 5.3e-188 661.4 454 71.8
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 6.9e-188 661.0 470 69.8
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 3.4e-187 658.7 468 70.1
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 1.3e-186 656.8 467 70.0
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 2.2e-186 656.0 476 68.7
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 2.2e-186 656.0 464 69.6
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 8.5e-186 654.1 464 69.4
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 1.4e-185 653.3 467 69.8
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 1.4e-185 653.3 467 70.0
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 1.4e-185 653.3 467 69.6
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 1.4e-185 653.3 472 68.4
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 3.2e-185 652.1 467 70.0
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 3.2e-185 652.1 467 70.0
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 1.6e-184 649.8 503 66.4
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 2.1e-184 649.4 472 68.0
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 2.7e-184 649.0 504 64.3
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 3.6e-184 648.7 467 69.2
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 6.1e-184 647.9 467 69.2
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 3.3e-182 642.1 468 69.2
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 7.4e-182 641.0 448 70.3
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 2.4e-180 636.0 468 68.8
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 3.1e-180 635.6 415 72.8
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 9.1e-180 634.0 407 73.7
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 3.4e-179 632.1 396 75.8
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 2.2e-170 602.8 388 73.5
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 2.8e-165 585.9 422 69.0
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 2.0e-158 563.1 426 63.6
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 1.3e-157 560.5 384 70.6
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 1.3e-157 560.5 421 63.4
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 4.5e-155 552.0 476 62.2
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 1.1e-153 547.4 426 62.7
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 3.7e-141 505.8 324 75.9
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 4.0e-135 485.7 347 68.6
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 9.5e-129 464.5 460 55.4
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 2.5e-121 439.9 399 54.4
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 1.0e-114 417.9 413 51.1
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 2.3e-114 416.8 414 51.7
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 2.4e-111 406.8 396 54.3
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 5.2e-111 405.6 421 51.3
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 8.1e-96 355.1 417 45.6
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 1.3e-74 284.6 205 68.8
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 6.3e-64 249.2 206 62.1
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 6.3e-64 249.2 206 62.1
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 1.5e-62 244.6 187 65.2
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 2.9e-53 213.8 196 55.1
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 4.0e-26 123.6 88 71.6
Lj5A80T54 Lonicera japonica HOM05D007307 ORTHO05D009190 4.3e-20 103.6 61 77.0


User provided reference genes

Program Settings